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The map label for this gene is 189424011

Identifier: 189424011

GI number: 189424011

Start: 981237

End: 982772

Strand: Reverse

Name: 189424011

Synonym: Glov_0945

Alternate gene names: NA

Gene position: 982772-981237 (Counterclockwise)

Preceding gene: 189424012

Following gene: 189424009

Centisome position: 25.09

GC content: 56.32

Gene sequence:

>1536_bases
ATGAAGAGACTGTGGAGCAGTATCGCTTCGGCAGCATTGTTGGTGGCATGTGCGCTACCGGCCTATGCCGAAAAGACTAT
GGAAACGGACATTGCAGTTGTCGGCGGCGGCCTTTCGGGGCTGTCGGCAGCTACCCAGGCAACCCAACTGGGAGCCAAGG
TGGTAGTGCTTGAGAAGCAGGCCAAGGTAGGCGGCACCGGGCTGTTCTGTGAGGGTGTCTTTGCTGCAGAGAGCAAGCTG
CAAAAAAGGATCGGCATCAATGTCACCAAGGATTTTGCCTACAAGCTGATCATGGAATACAGCCACTGGAAGGCCAATTC
CGCGCTGGCAAAACATTTTGTGGATCGCTCGGCTGAAACCGTTGACTGGCTGGACTCAATGGGGATCAAGATTGAATATA
TCGGTGTCGGCGGCCATGGCGGCCCCCTGACCTGGCATGTAATTGCTCCGGGTCCGGACTATCTCTCCGGCAAAAACAAG
AAGGACTACCACTGCGAGCGGATCATCAATGTGTTCAGCAAGTATGTTACCGACAAAGGTGGACAGATCCTGCTGCAAAC
CCCCGGTACTGACCTGATCATGGACAACGGCAAGGTCGTTGGTGTCTGGGCCAAGGACAAGTCCGGCGAGAAGATCCGCA
TCAATGCCAAGGCGGTTGTTATTGCTACCGGCGGTTTCTCCAGCAACAAGGAGATGATGAAGAAGTACTATCCCGAGTAT
CCCGACATCACCCCGGTGGGTAACATCGGTAAGGATGGCGACGGCATCACGATGGGCATCAAGGCAGGTGCCGATCTTGA
GGGCATGAACACAGTACAGGGCTACCGGCCCGGTCTGCCCGGCTTCCACCCGGCCGACCAGATGATCGCCCTGGCAGTAC
AACCCTATTTCTGGGTCACCCCCCGTGGTGAGCGCTATACCGACGAGTCCAACATCGTCTTCTGGCCTTACTCCAATAAC
TCCCTGGTCCGTGTCGGTGGTGTTGCCTACGCCATCTATGATGATGCAACCCGCAAGATGGCCGTTGAACAGGGGATTGA
AATGCCTCTGGGCGAGTGGGTTCTGGCAGGCACCAAACTGGTCAAGTGGGAAGATGCCTTTAACAAAGAACTGGCCCGCA
AGCGTGGCAACGTTTTCAAGGCCGACACCATCGAAGAGCTGGCCAAGCAGCTGAACATGAAGCCTGAAGTGCTGCAGGCC
AGTGTTGCCAGGATGAACACAGCAGCCGATACCCGTAAAGATGCCGAGTTTGGCAAAGATCCAAAATTCTTGCGTAAAGT
GGCCACCGGTCCCTTCTATGCCACCAAGCTGACCCCCCGTCACCTGGGTACTCTGGGCGGCATGAAAGTAACGGCCAACA
ACCAGGTGGTCAAGACAAGCGGTGACCCGATCCCCGGCCTCTACGCCGTTGGTACCGACTCCGGTGGTATGTATGGCGAC
TCCTACGACCTGTTGCTGGGCGGCGGCACCGCCGGCTACGCCATCAACTCCGGCCGTTTTGCAGCGGAGCATGCGGTCAA
ATATATCAAGCAGTAA

Upstream 100 bases:

>100_bases
CCACACCTTTGATTTTGTACCTAAATAGCTGGTTTGCAGACAGTTTTCACGTCCCTGGCCACGGCCGTTCAGGGACCTAC
ACCCAACACAGGAGGAAGAT

Downstream 100 bases:

>100_bases
AAAACCGGTTTCAAACAGGCCTGAACAGCAAAGCCCCTGTGGAGTCGCACTCCGCAGGGGCTTTGCTGTATCTCCGCCGC
TTCTCCCGATCCTGGTTCAG

Product: succinate dehydrogenase

Products: NA

Alternate protein names: Flavocytochrome c; FL cyt [H]

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MKRLWSSIASAALLVACALPAYAEKTMETDIAVVGGGLSGLSAATQATQLGAKVVVLEKQAKVGGTGLFCEGVFAAESKL
QKRIGINVTKDFAYKLIMEYSHWKANSALAKHFVDRSAETVDWLDSMGIKIEYIGVGGHGGPLTWHVIAPGPDYLSGKNK
KDYHCERIINVFSKYVTDKGGQILLQTPGTDLIMDNGKVVGVWAKDKSGEKIRINAKAVVIATGGFSSNKEMMKKYYPEY
PDITPVGNIGKDGDGITMGIKAGADLEGMNTVQGYRPGLPGFHPADQMIALAVQPYFWVTPRGERYTDESNIVFWPYSNN
SLVRVGGVAYAIYDDATRKMAVEQGIEMPLGEWVLAGTKLVKWEDAFNKELARKRGNVFKADTIEELAKQLNMKPEVLQA
SVARMNTAADTRKDAEFGKDPKFLRKVATGPFYATKLTPRHLGTLGGMKVTANNQVVKTSGDPIPGLYAVGTDSGGMYGD
SYDLLLGGGTAGYAINSGRFAAEHAVKYIKQ

Sequences:

>Translated_511_residues
MKRLWSSIASAALLVACALPAYAEKTMETDIAVVGGGLSGLSAATQATQLGAKVVVLEKQAKVGGTGLFCEGVFAAESKL
QKRIGINVTKDFAYKLIMEYSHWKANSALAKHFVDRSAETVDWLDSMGIKIEYIGVGGHGGPLTWHVIAPGPDYLSGKNK
KDYHCERIINVFSKYVTDKGGQILLQTPGTDLIMDNGKVVGVWAKDKSGEKIRINAKAVVIATGGFSSNKEMMKKYYPEY
PDITPVGNIGKDGDGITMGIKAGADLEGMNTVQGYRPGLPGFHPADQMIALAVQPYFWVTPRGERYTDESNIVFWPYSNN
SLVRVGGVAYAIYDDATRKMAVEQGIEMPLGEWVLAGTKLVKWEDAFNKELARKRGNVFKADTIEELAKQLNMKPEVLQA
SVARMNTAADTRKDAEFGKDPKFLRKVATGPFYATKLTPRHLGTLGGMKVTANNQVVKTSGDPIPGLYAVGTDSGGMYGD
SYDLLLGGGTAGYAINSGRFAAEHAVKYIKQ
>Mature_511_residues
MKRLWSSIASAALLVACALPAYAEKTMETDIAVVGGGLSGLSAATQATQLGAKVVVLEKQAKVGGTGLFCEGVFAAESKL
QKRIGINVTKDFAYKLIMEYSHWKANSALAKHFVDRSAETVDWLDSMGIKIEYIGVGGHGGPLTWHVIAPGPDYLSGKNK
KDYHCERIINVFSKYVTDKGGQILLQTPGTDLIMDNGKVVGVWAKDKSGEKIRINAKAVVIATGGFSSNKEMMKKYYPEY
PDITPVGNIGKDGDGITMGIKAGADLEGMNTVQGYRPGLPGFHPADQMIALAVQPYFWVTPRGERYTDESNIVFWPYSNN
SLVRVGGVAYAIYDDATRKMAVEQGIEMPLGEWVLAGTKLVKWEDAFNKELARKRGNVFKADTIEELAKQLNMKPEVLQA
SVARMNTAADTRKDAEFGKDPKFLRKVATGPFYATKLTPRHLGTLGGMKVTANNQVVKTSGDPIPGLYAVGTDSGGMYGD
SYDLLLGGGTAGYAINSGRFAAEHAVKYIKQ

Specific function: Catalyzes fumarate reduction using artificial electron donors such as methyl viologen. The physiological reductant is unknown, but evidence indicates that flavocytochrome c participates in electron transfer from formate to fumarate and possibly also to tr

COG id: COG1053

COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI71986328, Length=482, Percent_Identity=23.0290456431535, Blast_Score=91, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6322511, Length=518, Percent_Identity=23.1660231660232, Blast_Score=103, Evalue=6e-23,
Organism=Saccharomyces cerevisiae, GI6320788, Length=495, Percent_Identity=24.040404040404, Blast_Score=88, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003953
- InterPro:   IPR013027
- InterPro:   IPR010960
- InterPro:   IPR011031
- InterPro:   IPR012286 [H]

Pfam domain/function: PF00890 FAD_binding_2 [H]

EC number: =1.3.99.1 [H]

Molecular weight: Translated: 55234; Mature: 55234

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLWSSIASAALLVACALPAYAEKTMETDIAVVGGGLSGLSAATQATQLGAKVVVLEKQ
CHHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCEEEEEECC
AKVGGTGLFCEGVFAAESKLQKRIGINVTKDFAYKLIMEYSHWKANSALAKHFVDRSAET
CCCCCCEEEECCHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHH
VDWLDSMGIKIEYIGVGGHGGPLTWHVIAPGPDYLSGKNKKDYHCERIINVFSKYVTDKG
HHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
GQILLQTPGTDLIMDNGKVVGVWAKDKSGEKIRINAKAVVIATGGFSSNKEMMKKYYPEY
CEEEEECCCCCEEEECCEEEEEEECCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHCCCC
PDITPVGNIGKDGDGITMGIKAGADLEGMNTVQGYRPGLPGFHPADQMIALAVQPYFWVT
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEECCEEEEC
PRGERYTDESNIVFWPYSNNSLVRVGGVAYAIYDDATRKMAVEQGIEMPLGEWVLAGTKL
CCCCCCCCCCCEEEEEECCCCEEEECCEEEEEECCHHHHHHHHHCCCCCCCCEEECCCEE
VKWEDAFNKELARKRGNVFKADTIEELAKQLNMKPEVLQASVARMNTAADTRKDAEFGKD
EEEHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCCC
PKFLRKVATGPFYATKLTPRHLGTLGGMKVTANNQVVKTSGDPIPGLYAVGTDSGGMYGD
HHHHHHHHCCCEEEEECCHHHHCCCCCEEEECCCEEEECCCCCCCCEEEEECCCCCCCCC
SYDLLLGGGTAGYAINSGRFAAEHAVKYIKQ
CEEEEEECCCCCEEECCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKRLWSSIASAALLVACALPAYAEKTMETDIAVVGGGLSGLSAATQATQLGAKVVVLEKQ
CHHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCEEEEEECC
AKVGGTGLFCEGVFAAESKLQKRIGINVTKDFAYKLIMEYSHWKANSALAKHFVDRSAET
CCCCCCEEEECCHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHH
VDWLDSMGIKIEYIGVGGHGGPLTWHVIAPGPDYLSGKNKKDYHCERIINVFSKYVTDKG
HHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
GQILLQTPGTDLIMDNGKVVGVWAKDKSGEKIRINAKAVVIATGGFSSNKEMMKKYYPEY
CEEEEECCCCCEEEECCEEEEEEECCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHCCCC
PDITPVGNIGKDGDGITMGIKAGADLEGMNTVQGYRPGLPGFHPADQMIALAVQPYFWVT
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEECCEEEEC
PRGERYTDESNIVFWPYSNNSLVRVGGVAYAIYDDATRKMAVEQGIEMPLGEWVLAGTKL
CCCCCCCCCCCEEEEEECCCCEEEECCEEEEEECCHHHHHHHHHCCCCCCCCEEECCCEE
VKWEDAFNKELARKRGNVFKADTIEELAKQLNMKPEVLQASVARMNTAADTRKDAEFGKD
EEEHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCCC
PKFLRKVATGPFYATKLTPRHLGTLGGMKVTANNQVVKTSGDPIPGLYAVGTDSGGMYGD
HHHHHHHHCCCEEEEECCHHHHCCCCCEEEECCCEEEECCCCCCCCEEEEECCCCCCCCC
SYDLLLGGGTAGYAINSGRFAAEHAVKYIKQ
CEEEEEECCCCCEEECCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11425747; 12368813; 10581551 [H]