| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
Click here to switch to the map view.
The map label for this gene is phsA [H]
Identifier: 189423996
GI number: 189423996
Start: 958836
End: 961031
Strand: Reverse
Name: phsA [H]
Synonym: Glov_0930
Alternate gene names: 189423996
Gene position: 961031-958836 (Counterclockwise)
Preceding gene: 189423997
Following gene: 189423995
Centisome position: 24.53
GC content: 62.39
Gene sequence:
>2196_bases ATGACCATGCCACAGACAGTAAAGACAAACTGCCGCTTTTGCGGCTATCAATGCGGCCTGACCGCCACCGTGGAAAACGG CAGAGTGACCGGGGTTGCCCCGGACCCGACCCAGTATCCGGGTGATGAACGTATTCAGCACGGCTGCCATCGCTGGCGGA TGGCACCGCAGTTTCTGGACCACCCTGACCGCGTCAACTACCCCCTGAAACGGGTTGGTGAACGGGGCAGCGGCCAGTGG CATCGGATCAGCTGGGACCAGGCCCTGGACGAGATTGCGGAAAAGCTGGCCGGGCTGAAGGAACAGTTCGGGCCGGAAAC CCTGGCCACCTGCATCGGCGGCCCCCATGCCGTCTACTGGCCCCTGCACCGTTTCATGACCCTCTTCGGCAGTCCCAACA ATGTCGGTATCGGCCAGATCTGCTGGAACCCCGGCACCCTGCTGCATGCGATCAGCTACGGCTGGCCCCTCGATAACGAG CTGGAACCTGACCTGACCGGCTGCCTGATGTTGTGGGGGGCAAACCACGCCGAATCCGACAACTCACTGCTGTGGCACAG GATCCAGCAGTACAGCCGGACCGGCAAACCGCTGATCGTGGTCGATCCCCGCCGCACCAGGACGGCTGAGCTGGCAACCC ACTGGCTCCCGGTCCGGCCCGGTACCGATGCGGTGCTCGCCCTGGGACTCGTCCAGGCCATCATCCAGAACCGCTGGTAC GACGCCCCCTTTGTGGAGGCCTGGTGCCACGGCTTTGCCAGGCTGGCCGGACACCTGCAACACTACACTCCCGGCTACGT TGCAGAGGCCACCGGCATACCAGCGGAGCAGCTACTGGAGGTAGCCCGTCTGTACGCCCTGCAGTGTCCCTCTGCGCTGT TTACCGGACGGGGTATCGACCAGATCGGCCGGAACAGCGTGCCGCTTCATCACTCCCTTGATATTCTGCGGGCCATCACC GGCAATATTGACCGCAAAGGGGCCTCCTGCATCACCGGGATGCCTGACTTCATACCAGAGCTTGAGTTGGAGCTGAGTGA CCGGTTTTTGGAGACACAACGCAGGAAGCAGCTCGGCCAGCTGAAGCTGCAGAGCTATCACGGCTACGAACAGATCAGAA AGCTGACCAGCAAACAGGACAAACGGTTGCCGATGCGCTACCTGACCTCGACGCAACCCAACCTGGTCTGGCAGGCGATG CTGACCGACCGACCCTACCCGATCCGCTCCATGATTGTCATGGCCACCAACCCGCTCTTGACCCAGGCGGATACCAGCCT GGTCTACCAGGCACTCAAGAGCCTGGATCTGCTGGTGGTGCTGGAACTGTTCCAGACCCCGACAGCCATGCTGGCCGACT ACCTGCTACCCAGTGCCGGTGTGCTGGAGCGGGCCCTGTTCGAGACCAAGGCCGGCACCGCCAACCTGGCCTACGGCGGC GCCAAGGCGGTGGAACCGTACTACGAACGGCGGCCTGACTTTGATTTCTGGCAGGGACTGGGGCGCCGGCTGGGTCAGCA GGAAGACTGGCCCTGGCAGAGCTTCGAGGACAGCCTTGAGGCCACCCTTGCCCCAACCGGGGTTGACTGGGAGACCTTCA GCCGTCATGGCCTGTACACGCTGCCGGAGGAGTACGAAAAACACGAAAGAATCGATCCGGCCACCGGCAAGGCCGCCGGA TTTGCCACCACAACCGGCAAGATTGAGCTGTACAGCGAGCTGCTTGCCGGACTCGGGGCAGAACCGTTGCCGGTCCCCAA ACCGGTGGCGGCTGTTGACGAGCAGTATCCGCTTTCCCTGATCACCGGGGCCAGGTATCACCCCTACTACGCCTCCAGCT TTCATCAGCTTGAGGGGTTGCGCAAGCTGCATCCCGAGCCCTGGGCCGAGGTGAGCCGGGCAACTGCCCACAAGCTCGGC CTGGCAGAAGGTACACCCGTCCGGGTTACCACCGAAAAGGGAACTGCCTGCTTTACACTCAAGATCTCCGAGATGTGCGA TGACGTGGTCAGTGTCGAGTATGGCTGGTGGTACCCTGAGAAGAAGGCCGCCGAGCCGGAACTGGGCGGACTGTGGCTGG CCAACGCCAATCTGCTGACCAGCGCCGACTATGCAACGGCAGATCCGCTGATCGGTACCGCCACCTACAACGGCATTCCC TGTTGCCTGCAGGCTGTTGACAGTGGTAAGAAATGA
Upstream 100 bases:
>100_bases AGCATGACGGTATCGCGGGCTGATGGCTGCATCGTCCCGTTCTGTTCCTATCAATTGACCTCCCTCGACGGCACGAAACG AAAGACCCGGTAATCTGATT
Downstream 100 bases:
>100_bases GCCCGGGAAAAACAGTTCCCGCGGAGGCAAAAGATGATGATTGAACCGCAGCAACTGATCCTGTTCTTTACCACCTCGGT CCTGCTGGGCCTGGCGCCGG
Product: molybdopterin oxidoreductase
Products: Reduced form of N-Oxide compounds [C]
Alternate protein names: NA
Number of amino acids: Translated: 731; Mature: 730
Protein sequence:
>731_residues MTMPQTVKTNCRFCGYQCGLTATVENGRVTGVAPDPTQYPGDERIQHGCHRWRMAPQFLDHPDRVNYPLKRVGERGSGQW HRISWDQALDEIAEKLAGLKEQFGPETLATCIGGPHAVYWPLHRFMTLFGSPNNVGIGQICWNPGTLLHAISYGWPLDNE LEPDLTGCLMLWGANHAESDNSLLWHRIQQYSRTGKPLIVVDPRRTRTAELATHWLPVRPGTDAVLALGLVQAIIQNRWY DAPFVEAWCHGFARLAGHLQHYTPGYVAEATGIPAEQLLEVARLYALQCPSALFTGRGIDQIGRNSVPLHHSLDILRAIT GNIDRKGASCITGMPDFIPELELELSDRFLETQRRKQLGQLKLQSYHGYEQIRKLTSKQDKRLPMRYLTSTQPNLVWQAM LTDRPYPIRSMIVMATNPLLTQADTSLVYQALKSLDLLVVLELFQTPTAMLADYLLPSAGVLERALFETKAGTANLAYGG AKAVEPYYERRPDFDFWQGLGRRLGQQEDWPWQSFEDSLEATLAPTGVDWETFSRHGLYTLPEEYEKHERIDPATGKAAG FATTTGKIELYSELLAGLGAEPLPVPKPVAAVDEQYPLSLITGARYHPYYASSFHQLEGLRKLHPEPWAEVSRATAHKLG LAEGTPVRVTTEKGTACFTLKISEMCDDVVSVEYGWWYPEKKAAEPELGGLWLANANLLTSADYATADPLIGTATYNGIP CCLQAVDSGKK
Sequences:
>Translated_731_residues MTMPQTVKTNCRFCGYQCGLTATVENGRVTGVAPDPTQYPGDERIQHGCHRWRMAPQFLDHPDRVNYPLKRVGERGSGQW HRISWDQALDEIAEKLAGLKEQFGPETLATCIGGPHAVYWPLHRFMTLFGSPNNVGIGQICWNPGTLLHAISYGWPLDNE LEPDLTGCLMLWGANHAESDNSLLWHRIQQYSRTGKPLIVVDPRRTRTAELATHWLPVRPGTDAVLALGLVQAIIQNRWY DAPFVEAWCHGFARLAGHLQHYTPGYVAEATGIPAEQLLEVARLYALQCPSALFTGRGIDQIGRNSVPLHHSLDILRAIT GNIDRKGASCITGMPDFIPELELELSDRFLETQRRKQLGQLKLQSYHGYEQIRKLTSKQDKRLPMRYLTSTQPNLVWQAM LTDRPYPIRSMIVMATNPLLTQADTSLVYQALKSLDLLVVLELFQTPTAMLADYLLPSAGVLERALFETKAGTANLAYGG AKAVEPYYERRPDFDFWQGLGRRLGQQEDWPWQSFEDSLEATLAPTGVDWETFSRHGLYTLPEEYEKHERIDPATGKAAG FATTTGKIELYSELLAGLGAEPLPVPKPVAAVDEQYPLSLITGARYHPYYASSFHQLEGLRKLHPEPWAEVSRATAHKLG LAEGTPVRVTTEKGTACFTLKISEMCDDVVSVEYGWWYPEKKAAEPELGGLWLANANLLTSADYATADPLIGTATYNGIP CCLQAVDSGKK >Mature_730_residues TMPQTVKTNCRFCGYQCGLTATVENGRVTGVAPDPTQYPGDERIQHGCHRWRMAPQFLDHPDRVNYPLKRVGERGSGQWH RISWDQALDEIAEKLAGLKEQFGPETLATCIGGPHAVYWPLHRFMTLFGSPNNVGIGQICWNPGTLLHAISYGWPLDNEL EPDLTGCLMLWGANHAESDNSLLWHRIQQYSRTGKPLIVVDPRRTRTAELATHWLPVRPGTDAVLALGLVQAIIQNRWYD APFVEAWCHGFARLAGHLQHYTPGYVAEATGIPAEQLLEVARLYALQCPSALFTGRGIDQIGRNSVPLHHSLDILRAITG NIDRKGASCITGMPDFIPELELELSDRFLETQRRKQLGQLKLQSYHGYEQIRKLTSKQDKRLPMRYLTSTQPNLVWQAML TDRPYPIRSMIVMATNPLLTQADTSLVYQALKSLDLLVVLELFQTPTAMLADYLLPSAGVLERALFETKAGTANLAYGGA KAVEPYYERRPDFDFWQGLGRRLGQQEDWPWQSFEDSLEATLAPTGVDWETFSRHGLYTLPEEYEKHERIDPATGKAAGF ATTTGKIELYSELLAGLGAEPLPVPKPVAAVDEQYPLSLITGARYHPYYASSFHQLEGLRKLHPEPWAEVSRATAHKLGL AEGTPVRVTTEKGTACFTLKISEMCDDVVSVEYGWWYPEKKAAEPELGGLWLANANLLTSADYATADPLIGTATYNGIPC CLQAVDSGKK
Specific function: Oxidoreductase which produces hydrogen sulfide from thiosulfate (Potential) [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Cytoplasm Face Of The Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI87081797, Length=753, Percent_Identity=25.3652058432935, Blast_Score=186, Evalue=5e-48, Organism=Escherichia coli, GI171474008, Length=740, Percent_Identity=25.4054054054054, Blast_Score=181, Evalue=2e-46, Organism=Escherichia coli, GI1787870, Length=747, Percent_Identity=25.9705488621151, Blast_Score=172, Evalue=5e-44, Organism=Escherichia coli, GI3868721, Length=705, Percent_Identity=24.822695035461, Blast_Score=163, Evalue=4e-41, Organism=Escherichia coli, GI145693196, Length=695, Percent_Identity=23.5971223021583, Blast_Score=108, Evalue=2e-24, Organism=Escherichia coli, GI1787231, Length=770, Percent_Identity=22.987012987013, Blast_Score=103, Evalue=4e-23, Organism=Escherichia coli, GI87081994, Length=713, Percent_Identity=23.7026647966339, Blast_Score=99, Evalue=7e-22, Organism=Escherichia coli, GI1788534, Length=576, Percent_Identity=22.9166666666667, Blast_Score=93, Evalue=7e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 - InterPro: IPR006311 [H]
Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: 1.8.99.- [C]
Molecular weight: Translated: 81562; Mature: 81430
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMPQTVKTNCRFCGYQCGLTATVENGRVTGVAPDPTQYPGDERIQHGCHRWRMAPQFLD CCCCCCHHCCCCEECEECCEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHCC HPDRVNYPLKRVGERGSGQWHRISWDQALDEIAEKLAGLKEQFGPETLATCIGGPHAVYW CCCCCCCCHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHH PLHRFMTLFGSPNNVGIGQICWNPGTLLHAISYGWPLDNELEPDLTGCLMLWGANHAESD HHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHCCCCCCCCCCCCHHHEEHEECCCCCCCC NSLLWHRIQQYSRTGKPLIVVDPRRTRTAELATHWLPVRPGTDAVLALGLVQAIIQNRWY CHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCC DAPFVEAWCHGFARLAGHLQHYTPGYVAEATGIPAEQLLEVARLYALQCPSALFTGRGID CCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHCCHHHHCCCCHH QIGRNSVPLHHSLDILRAITGNIDRKGASCITGMPDFIPELELELSDRFLETQRRKQLGQ HHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LKLQSYHGYEQIRKLTSKQDKRLPMRYLTSTQPNLVWQAMLTDRPYPIRSMIVMATNPLL HHHHHHCCHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEHHCCCCCCHHHEEEEECCCCH TQADTSLVYQALKSLDLLVVLELFQTPTAMLADYLLPSAGVLERALFETKAGTANLAYGG HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCEEECCC AKAVEPYYERRPDFDFWQGLGRRLGQQEDWPWQSFEDSLEATLAPTGVDWETFSRHGLYT CHHCCHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCC LPEEYEKHERIDPATGKAAGFATTTGKIELYSELLAGLGAEPLPVPKPVAAVDEQYPLSL CCHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHH ITGARYHPYYASSFHQLEGLRKLHPEPWAEVSRATAHKLGLAEGTPVRVTTEKGTACFTL HCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEE KISEMCDDVVSVEYGWWYPEKKAAEPELGGLWLANANLLTSADYATADPLIGTATYNGIP EHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCEEECCCCCHH CCLQAVDSGKK HHHHHHCCCCC >Mature Secondary Structure TMPQTVKTNCRFCGYQCGLTATVENGRVTGVAPDPTQYPGDERIQHGCHRWRMAPQFLD CCCCCHHCCCCEECEECCEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHCC HPDRVNYPLKRVGERGSGQWHRISWDQALDEIAEKLAGLKEQFGPETLATCIGGPHAVYW CCCCCCCCHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHH PLHRFMTLFGSPNNVGIGQICWNPGTLLHAISYGWPLDNELEPDLTGCLMLWGANHAESD HHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHCCCCCCCCCCCCHHHEEHEECCCCCCCC NSLLWHRIQQYSRTGKPLIVVDPRRTRTAELATHWLPVRPGTDAVLALGLVQAIIQNRWY CHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCC DAPFVEAWCHGFARLAGHLQHYTPGYVAEATGIPAEQLLEVARLYALQCPSALFTGRGID CCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHCCHHHHCCCCHH QIGRNSVPLHHSLDILRAITGNIDRKGASCITGMPDFIPELELELSDRFLETQRRKQLGQ HHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LKLQSYHGYEQIRKLTSKQDKRLPMRYLTSTQPNLVWQAMLTDRPYPIRSMIVMATNPLL HHHHHHCCHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEHHCCCCCCHHHEEEEECCCCH TQADTSLVYQALKSLDLLVVLELFQTPTAMLADYLLPSAGVLERALFETKAGTANLAYGG HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCEEECCC AKAVEPYYERRPDFDFWQGLGRRLGQQEDWPWQSFEDSLEATLAPTGVDWETFSRHGLYT CHHCCHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCC LPEEYEKHERIDPATGKAAGFATTTGKIELYSELLAGLGAEPLPVPKPVAAVDEQYPLSL CCHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHH ITGARYHPYYASSFHQLEGLRKLHPEPWAEVSRATAHKLGLAEGTPVRVTTEKGTACFTL HCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEE KISEMCDDVVSVEYGWWYPEKKAAEPELGGLWLANANLLTSADYATADPLIGTATYNGIP EHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCEEECCCCCHH CCLQAVDSGKK HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: May Bind 4Fe-4S Cluster. [C]
Metal ions: Fe; Mo [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: N-Oxide; Sulfoxide Compounds Including Trimethylamine N-Oxide. [C]
Specific reaction: Reduces Various N-Oxide And Sulfoxide Compounds Including Trimethylamine N-Oxide. [C]
General reaction: Oxidoreductases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7751291; 11677609; 7737516 [H]