| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is surA [H]
Identifier: 189423767
GI number: 189423767
Start: 707640
End: 708707
Strand: Reverse
Name: surA [H]
Synonym: Glov_0698
Alternate gene names: 189423767
Gene position: 708707-707640 (Counterclockwise)
Preceding gene: 189423768
Following gene: 189423760
Centisome position: 18.09
GC content: 54.03
Gene sequence:
>1068_bases ATGAATCATCTTCGCCTGCTTTCCCTTGCCTCCCTCCTGAGCATATCTCTGCTGGGAGGTTGCGCATCCACCCCCGATGT CATAACAGACACCGCCAAACAGCAACCACCAACCCTTACGGTGCCAAAACTCGCACCGCTTCCAGCCGGCGCCAAGCGTA TTAATGGTGTTGCAGCCATTGTCAATGACGATATCATCACCTTCCGGGAGGTACTGCGCGAATCCCAGGCGGTCATTCAG GATGCCCAGAAAAAAGGGCTCGTGGATGACACGGCTCGTCACAATCTGCGCGTCATGGTGCTAGACCGGCTGATTGAGAA ACTCCTGACCGAGCAGAAGATTAAAGAACTGGGTATCAAGATCGGTGATGATGAAATCCGCCAAGCCATTGATGACGTCA AGCGCCAGAACAACAATATGACCCAGAGTCAACTGGAGGCAGCGCTTAAATCCCAGGGCTACACGTTTGCCCAGTATGAG GTCCAGCTCCGCGAACAGTTGGAACGGCTGCGTCTGGTGAGTATGGAAGTTCGCTCAAAGATATATGTCAGCGAAAAGGA AGCGGAAGAGTATTATCAGTCCCATCTGAGCAGTTATGCCGAAGAAGAGACCTTCAAGGCCAGTCACATCTTTATCAAGG TTGACGAAAAGGCCCCCGCCGATCAGATTCAACAGGCCATGAACAAGGCCCTGAAGGTGCTGTTTGAGGCCCGGCAGGGC AAGGACTTTGCTCAACTAGCCAGGGAATACTCCGACGACGCGGCGGCAAAGAAGGATGGTGGCAGCCTGGGAACGTTTAA ACGGGGAGAGATGCTGGCGGACCTTGAAAAGGCGATCCTGCCGCTCAAACCGGGCGAGGTCGGCGAACTGGTTTCAACCC CGTCCGGATTGCACATTGTTAAGCTGGATGAGCGCTCAAGCGGTAAAGTCAAGCCCTTTGAGACCGTCAAGGCCGATATC TCAGACCTGCTCTACCGCCAGAAGCAGGATAGCCGCTTTACCTCCTGGATGAAGGAACTGCGGACAAAGGCCAGCATCGA GATCAAAGACGGGACCGGACTTATCTGA
Upstream 100 bases:
>100_bases CGCTCCAGCTCCAGCTCCTGCAGCAGAAAAGAAATAATCGCTATTAACGTGATCCAGGCCGGGCAGCCAGTTGGTTGCCC GGCCTGCTTTCGAGGCCTTC
Downstream 100 bases:
>100_bases CTTTTCTCGAAAGCCCCCTGCGCTGCGGCCTCTGTGCCAAACAGGAAAAGCCCCGGCAACCGTTCTGGTTTGCCGGGGCT TTCCTGTTATGTTCTCCGTC
Product: PpiC-type peptidyl-prolyl cis-trans isomerase
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase surA; PPIase surA; Rotamase surA [H]
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MNHLRLLSLASLLSISLLGGCASTPDVITDTAKQQPPTLTVPKLAPLPAGAKRINGVAAIVNDDIITFREVLRESQAVIQ DAQKKGLVDDTARHNLRVMVLDRLIEKLLTEQKIKELGIKIGDDEIRQAIDDVKRQNNNMTQSQLEAALKSQGYTFAQYE VQLREQLERLRLVSMEVRSKIYVSEKEAEEYYQSHLSSYAEEETFKASHIFIKVDEKAPADQIQQAMNKALKVLFEARQG KDFAQLAREYSDDAAAKKDGGSLGTFKRGEMLADLEKAILPLKPGEVGELVSTPSGLHIVKLDERSSGKVKPFETVKADI SDLLYRQKQDSRFTSWMKELRTKASIEIKDGTGLI
Sequences:
>Translated_355_residues MNHLRLLSLASLLSISLLGGCASTPDVITDTAKQQPPTLTVPKLAPLPAGAKRINGVAAIVNDDIITFREVLRESQAVIQ DAQKKGLVDDTARHNLRVMVLDRLIEKLLTEQKIKELGIKIGDDEIRQAIDDVKRQNNNMTQSQLEAALKSQGYTFAQYE VQLREQLERLRLVSMEVRSKIYVSEKEAEEYYQSHLSSYAEEETFKASHIFIKVDEKAPADQIQQAMNKALKVLFEARQG KDFAQLAREYSDDAAAKKDGGSLGTFKRGEMLADLEKAILPLKPGEVGELVSTPSGLHIVKLDERSSGKVKPFETVKADI SDLLYRQKQDSRFTSWMKELRTKASIEIKDGTGLI >Mature_355_residues MNHLRLLSLASLLSISLLGGCASTPDVITDTAKQQPPTLTVPKLAPLPAGAKRINGVAAIVNDDIITFREVLRESQAVIQ DAQKKGLVDDTARHNLRVMVLDRLIEKLLTEQKIKELGIKIGDDEIRQAIDDVKRQNNNMTQSQLEAALKSQGYTFAQYE VQLREQLERLRLVSMEVRSKIYVSEKEAEEYYQSHLSSYAEEETFKASHIFIKVDEKAPADQIQQAMNKALKVLFEARQG KDFAQLAREYSDDAAAKKDGGSLGTFKRGEMLADLEKAILPLKPGEVGELVSTPSGLHIVKLDERSSGKVKPFETVKADI SDLLYRQKQDSRFTSWMKELRTKASIEIKDGTGLI
Specific function: Chaperone involved in the correct folding and assembly of outer membrane proteins. It recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Periplasm. Note=Is capable of associating with the outer membrane (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PpiC domains [H]
Homologues:
Organism=Escherichia coli, GI1786238, Length=209, Percent_Identity=29.1866028708134, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1786645, Length=335, Percent_Identity=25.0746268656716, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: 400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000297 - InterPro: IPR023058 - InterPro: IPR023034 - InterPro: IPR015391 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase; PF09312 SurA_N [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 39652; Mature: 39652
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHLRLLSLASLLSISLLGGCASTPDVITDTAKQQPPTLTVPKLAPLPAGAKRINGVAAI CCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEE VNDDIITFREVLRESQAVIQDAQKKGLVDDTARHNLRVMVLDRLIEKLLTEQKIKELGIK CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC IGDDEIRQAIDDVKRQNNNMTQSQLEAALKSQGYTFAQYEVQLREQLERLRLVSMEVRSK CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHH IYVSEKEAEEYYQSHLSSYAEEETFKASHIFIKVDEKAPADQIQQAMNKALKVLFEARQG HHCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC KDFAQLAREYSDDAAAKKDGGSLGTFKRGEMLADLEKAILPLKPGEVGELVSTPSGLHIV CHHHHHHHHHCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEE KLDERSSGKVKPFETVKADISDLLYRQKQDSRFTSWMKELRTKASIEIKDGTGLI EECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEECCCCCCC >Mature Secondary Structure MNHLRLLSLASLLSISLLGGCASTPDVITDTAKQQPPTLTVPKLAPLPAGAKRINGVAAI CCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEE VNDDIITFREVLRESQAVIQDAQKKGLVDDTARHNLRVMVLDRLIEKLLTEQKIKELGIK CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC IGDDEIRQAIDDVKRQNNNMTQSQLEAALKSQGYTFAQYEVQLREQLERLRLVSMEVRSK CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHH IYVSEKEAEEYYQSHLSSYAEEETFKASHIFIKVDEKAPADQIQQAMNKALKVLFEARQG HHCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC KDFAQLAREYSDDAAAKKDGGSLGTFKRGEMLADLEKAILPLKPGEVGELVSTPSGLHIV CHHHHHHHHHCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEE KLDERSSGKVKPFETVKADISDLLYRQKQDSRFTSWMKELRTKASIEIKDGTGLI EECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]