| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
Click here to switch to the map view.
The map label for this gene is murF [H]
Identifier: 189423743
GI number: 189423743
Start: 681703
End: 683091
Strand: Reverse
Name: murF [H]
Synonym: Glov_0674
Alternate gene names: 189423743
Gene position: 683091-681703 (Counterclockwise)
Preceding gene: 189423744
Following gene: 189423742
Centisome position: 17.44
GC content: 58.89
Gene sequence:
>1389_bases ATGTTCACCCCGGAACAACTGACAACCATCACCCATGGTCGATTGATCGGGCCTGAAACCGCATCGGTCAGCGGCATCTC AACTGACTCGCGTACCATCAAACCTGGTGAGCTGTTCATACCGTTACGGGGAGACCGCTTTGACGGCCACGACTATCTCA ACGGGCTCACGGAGCGACGGATCCAGGTCAGCCTGTGCAATGAGTCATGGCTGCAACATCAGCAACCTCCGGCGACCTTA AGCTGCATTGCCGTACGCGACACCCTGCGCGCACTGGGGGATCTTGCCGCCGCCTTCCGGAAACGGTTTGCCCTGACCAT GATCGGGGTCACCGGCAGTAATGGCAAAACCACCACCAAAGAGATGCTGGCAGCCATTCTCGACCAGGTTGACCAGGGCC TGAAAACCAGCGGCAACCTGAACAATCAGATCGGCCTACCGCAGATGCTGTTTCAGCTGAAACCGGAACATTGCTGGGCA GTGCTGGAGATGGGGATGAGTGAGCCGGGTGAGATTGATCGCCTGGCAGAGATCGCCTGTCCTTCAATCGGCATTGTTCT CAATGCCTTTCCGGCCCACCTGCAGAGTATGGGGAGTGTCGAGGCCGTGGCTCAGGCCAAGGGTGAACTGCTACAGCGGA TACAGGATGGCGGCCTTGCAGTCGTGAATGCCGATGACCCCCGTATCGCCTCGCTGCACCAGAACCCTTCTGCCCGCAGG ACCAGCTTTGGCATCAAACGCGGCGAGGTTCGTGCTGAAGCGGTGCAGGCAATCGGCACAGAAGGTCAGGCATTCAAGCT GGTTACTCCCAAAGGCAGCATCGAGCTGCGGCTCAAGGCCCTGGGACAGCACAACATCTACAACGCCCTAGCTGCAGCAG CCGGATTACTGGAGCTGGTCGGCCTGGAAACCATTGCCGAAGGGCTCGAGGCCTTCGTTCCCTACACCGGACGCTTCCAT CTGGAAACGCTGTCCAACAACAGGCTGCTGATTGATGACAGCTACAATGCAAACCCAGCCTCCTGCGCTGCGGCCCTGGC AACCCTGCAGGGAATCAAAGGCAACAGACGCGCCTTCGTGGCATTGGGGGACATGCTGGAACTGGGCAGAGACGAGCTGG AGCTGCATCGTCAGTTAGGCATCCAGGCCGCTTCGGTTGCGGACCGGCTCTATCTGCTGGGCAGTCTTACCAAAGAAACC GCCGGTGCAGCCGCAGAGGCAGGCTTGGCTTCAGAGGCGATCATCTCTGCAACAAGCCACGAAGAGATCGCCAGGGATAT ACATACCCATGCAGGCAACGGCGACCTGATCTTGCTTAAGGGTTCACGGGGGATGAAGATGGAAAAAATCGCCGCGCTGC TGCGGGCTGCAGACGGCCAGGAGGACTAA
Upstream 100 bases:
>100_bases GCAGGCAAGGGGCATGAAGATTACCAGATCATCGGCCAGACCAAACAACACTTTGACGACCGTGAGGAAGCAGCCAATGC ATTCAGGGAGCGGATCTGAC
Downstream 100 bases:
>100_bases CACCATGCTCTTTCACCTGTTCTACCCCCTGGCATCCAACCTGAAGATTCTGAACATCTTCAAGTATCTGACCTTCAGAA CCATCTATGCCATGATCACG
Product: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase
Products: NA
Alternate protein names: D-alanyl-D-alanine-adding enzyme; UDP-MurNAc-pentapeptide synthetase [H]
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MFTPEQLTTITHGRLIGPETASVSGISTDSRTIKPGELFIPLRGDRFDGHDYLNGLTERRIQVSLCNESWLQHQQPPATL SCIAVRDTLRALGDLAAAFRKRFALTMIGVTGSNGKTTTKEMLAAILDQVDQGLKTSGNLNNQIGLPQMLFQLKPEHCWA VLEMGMSEPGEIDRLAEIACPSIGIVLNAFPAHLQSMGSVEAVAQAKGELLQRIQDGGLAVVNADDPRIASLHQNPSARR TSFGIKRGEVRAEAVQAIGTEGQAFKLVTPKGSIELRLKALGQHNIYNALAAAAGLLELVGLETIAEGLEAFVPYTGRFH LETLSNNRLLIDDSYNANPASCAAALATLQGIKGNRRAFVALGDMLELGRDELELHRQLGIQAASVADRLYLLGSLTKET AGAAAEAGLASEAIISATSHEEIARDIHTHAGNGDLILLKGSRGMKMEKIAALLRAADGQED
Sequences:
>Translated_462_residues MFTPEQLTTITHGRLIGPETASVSGISTDSRTIKPGELFIPLRGDRFDGHDYLNGLTERRIQVSLCNESWLQHQQPPATL SCIAVRDTLRALGDLAAAFRKRFALTMIGVTGSNGKTTTKEMLAAILDQVDQGLKTSGNLNNQIGLPQMLFQLKPEHCWA VLEMGMSEPGEIDRLAEIACPSIGIVLNAFPAHLQSMGSVEAVAQAKGELLQRIQDGGLAVVNADDPRIASLHQNPSARR TSFGIKRGEVRAEAVQAIGTEGQAFKLVTPKGSIELRLKALGQHNIYNALAAAAGLLELVGLETIAEGLEAFVPYTGRFH LETLSNNRLLIDDSYNANPASCAAALATLQGIKGNRRAFVALGDMLELGRDELELHRQLGIQAASVADRLYLLGSLTKET AGAAAEAGLASEAIISATSHEEIARDIHTHAGNGDLILLKGSRGMKMEKIAALLRAADGQED >Mature_462_residues MFTPEQLTTITHGRLIGPETASVSGISTDSRTIKPGELFIPLRGDRFDGHDYLNGLTERRIQVSLCNESWLQHQQPPATL SCIAVRDTLRALGDLAAAFRKRFALTMIGVTGSNGKTTTKEMLAAILDQVDQGLKTSGNLNNQIGLPQMLFQLKPEHCWA VLEMGMSEPGEIDRLAEIACPSIGIVLNAFPAHLQSMGSVEAVAQAKGELLQRIQDGGLAVVNADDPRIASLHQNPSARR TSFGIKRGEVRAEAVQAIGTEGQAFKLVTPKGSIELRLKALGQHNIYNALAAAAGLLELVGLETIAEGLEAFVPYTGRFH LETLSNNRLLIDDSYNANPASCAAALATLQGIKGNRRAFVALGDMLELGRDELELHRQLGIQAASVADRLYLLGSLTKET AGAAAEAGLASEAIISATSHEEIARDIHTHAGNGDLILLKGSRGMKMEKIAALLRAADGQED
Specific function: Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein [H]
COG id: COG0770
COG function: function code M; UDP-N-acetylmuramyl pentapeptide synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
Organism=Escherichia coli, GI1786274, Length=462, Percent_Identity=35.9307359307359, Blast_Score=210, Evalue=2e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR005863 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.10 [H]
Molecular weight: Translated: 49398; Mature: 49398
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTPEQLTTITHGRLIGPETASVSGISTDSRTIKPGELFIPLRGDRFDGHDYLNGLTERR CCCCHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCE IQVSLCNESWLQHQQPPATLSCIAVRDTLRALGDLAAAFRKRFALTMIGVTGSNGKTTTK EEEEECCHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCHHH EMLAAILDQVDQGLKTSGNLNNQIGLPQMLFQLKPEHCWAVLEMGMSEPGEIDRLAEIAC HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHC PSIGIVLNAFPAHLQSMGSVEAVAQAKGELLQRIQDGGLAVVNADDPRIASLHQNPSARR CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCHH TSFGIKRGEVRAEAVQAIGTEGQAFKLVTPKGSIELRLKALGQHNIYNALAAAAGLLELV HHCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH GLETIAEGLEAFVPYTGRFHLETLSNNRLLIDDSYNANPASCAAALATLQGIKGNRRAFV HHHHHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEE ALGDMLELGRDELELHRQLGIQAASVADRLYLLGSLTKETAGAAAEAGLASEAIISATSH EEHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHCCCCH EEIARDIHTHAGNGDLILLKGSRGMKMEKIAALLRAADGQED HHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MFTPEQLTTITHGRLIGPETASVSGISTDSRTIKPGELFIPLRGDRFDGHDYLNGLTERR CCCCHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCE IQVSLCNESWLQHQQPPATLSCIAVRDTLRALGDLAAAFRKRFALTMIGVTGSNGKTTTK EEEEECCHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCHHH EMLAAILDQVDQGLKTSGNLNNQIGLPQMLFQLKPEHCWAVLEMGMSEPGEIDRLAEIAC HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHC PSIGIVLNAFPAHLQSMGSVEAVAQAKGELLQRIQDGGLAVVNADDPRIASLHQNPSARR CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCHH TSFGIKRGEVRAEAVQAIGTEGQAFKLVTPKGSIELRLKALGQHNIYNALAAAAGLLELV HHCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH GLETIAEGLEAFVPYTGRFHLETLSNNRLLIDDSYNANPASCAAALATLQGIKGNRRAFV HHHHHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEE ALGDMLELGRDELELHRQLGIQAASVADRLYLLGSLTKETAGAAAEAGLASEAIISATSH EEHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHCCCCH EEIARDIHTHAGNGDLILLKGSRGMKMEKIAALLRAADGQED HHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]