| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
Click here to switch to the map view.
The map label for this gene is murC
Identifier: 189423738
GI number: 189423738
Start: 675634
End: 677004
Strand: Reverse
Name: murC
Synonym: Glov_0669
Alternate gene names: 189423738
Gene position: 677004-675634 (Counterclockwise)
Preceding gene: 189423739
Following gene: 189423737
Centisome position: 17.28
GC content: 58.21
Gene sequence:
>1371_bases ATGTACGGAAACATAGAAAAGATCCACTTTGTAGGTATTGGCGGCATCGGCATGAGCGGTATTGCCGAAGTGCTGCTGAA CCTGGGGTACCAGGTATCCGGTTCCGACCTGCGGGAGAGCGATACCACTGAACGGTTGCGCAGCCTGGGTGGTGAGATCT GCATCGGCCACGCCGCAGAAAATCTGACCAACGTGGATGTGGTGGTCACCTCAACAGCGGTGCAGAGTGACAATCCGGAG GTGATCGAGGCCAAGCATCGCATGGTACCGGTCATCCCGCGGGCAGAGATGCTGGCAGAGCTGATGCGGATGAAGTACGG CATTGCCATTGCCGGTACCCACGGCAAGACCACCACCACCTCCATGGTGGCCACGGTGCTGACCCATGCCGGGATCGACC CGACCATCGTGATCGGCGGCAAACTGAACACCCTGGGCAGCAATGCCAAGCTGGGACAGGGCAAATTTCTGGTGGCTGAG GCCGATGAGTCGGATGGTTCATTCCTGACCCTCTCCCCCACCATTGCCGTGGTAACCAACATCGATGCCGACCATCTGGA TTACTACACCGGCGGGTTGGAGCAGATTAAAGACACCTTTGTCTCCTTTATCAACAAGGTGCCGTTCTATGGTCTGGCGG TGCTTTGCCAGGAAGACCGCAATATTAACGAGATCATCCCCCGGATCAAGAAACGGTTCATGACCTACGGACTCTCGTCC CAGGCCGACCTGCGGGCGACCCATGTCAAGCTGGACGGTTTTCAAACCACCTTTACCGCCCACTACAAGGGCTATCGTCT GGGTGAAATCAGCTTCAATATGCCGGGTGCCCATAACGTACTGAACGCCCTGGCCTGTACCGCTGTGGCGCTGGAGCTGG ATGTGCCGTTCGACAAGATCCAGGAAGGTTTTGCCCAGTTTGGTGGTGTTGGTCGTCGTTTCACGGTCAAAGGAGAGAAA AACGGGATCATGGTGGTGGATGACTATGGCCACCACCCTGCCGAGATCCGGGCCACCCTGGGGGCGGCACGTAATGGCTG GCCCGAGCGTCGCCTGGTGGTGGCGTTCCAGCCCCACCGCTACAGTCGCACCAAGGAGTTGTTTAACGAGTTTGTCACCT GTTTCTATGATGCCGACGTATTGGTACTGACCGATATCTACGCTGCCAGCGAGCAGCCGATCCCCGGTGTTTCAGCCGAG CGTCTGGCCGAAGAGACCCGCCGCCATGGCCAGCGGGACGTGACCTACATTGCCGATCGGAACGACCTGCCTGATTACCT GGCCGGGATCGTCAAAGAAGGCGACATCGTGATCACCCTGGGGGCCGGCAATATCTGGCAAGCCGGCGAAGCTCTGGTGA AGAGGCTCTGA
Upstream 100 bases:
>100_bases ACCGCGACGCACTGAAACTGATTGGTGAAAATGCCGCTGCCCTGGCCCGGCTGGATGCAGCCAGGGTTATTGTTGACCAG ATGCTGGAAGGGGTACAGCC
Downstream 100 bases:
>100_bases TGCATGCCGGTCTTGAACATATCAGGGACTGGTTCAAGGGAGAGCTGCTGTTTCATGAGCCGCTTGCCAGACATGTCTCG CTGAAGGTGGGGGGGCCGGT
Product: UDP-N-acetylmuramate--L-alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MYGNIEKIHFVGIGGIGMSGIAEVLLNLGYQVSGSDLRESDTTERLRSLGGEICIGHAAENLTNVDVVVTSTAVQSDNPE VIEAKHRMVPVIPRAEMLAELMRMKYGIAIAGTHGKTTTTSMVATVLTHAGIDPTIVIGGKLNTLGSNAKLGQGKFLVAE ADESDGSFLTLSPTIAVVTNIDADHLDYYTGGLEQIKDTFVSFINKVPFYGLAVLCQEDRNINEIIPRIKKRFMTYGLSS QADLRATHVKLDGFQTTFTAHYKGYRLGEISFNMPGAHNVLNALACTAVALELDVPFDKIQEGFAQFGGVGRRFTVKGEK NGIMVVDDYGHHPAEIRATLGAARNGWPERRLVVAFQPHRYSRTKELFNEFVTCFYDADVLVLTDIYAASEQPIPGVSAE RLAEETRRHGQRDVTYIADRNDLPDYLAGIVKEGDIVITLGAGNIWQAGEALVKRL
Sequences:
>Translated_456_residues MYGNIEKIHFVGIGGIGMSGIAEVLLNLGYQVSGSDLRESDTTERLRSLGGEICIGHAAENLTNVDVVVTSTAVQSDNPE VIEAKHRMVPVIPRAEMLAELMRMKYGIAIAGTHGKTTTTSMVATVLTHAGIDPTIVIGGKLNTLGSNAKLGQGKFLVAE ADESDGSFLTLSPTIAVVTNIDADHLDYYTGGLEQIKDTFVSFINKVPFYGLAVLCQEDRNINEIIPRIKKRFMTYGLSS QADLRATHVKLDGFQTTFTAHYKGYRLGEISFNMPGAHNVLNALACTAVALELDVPFDKIQEGFAQFGGVGRRFTVKGEK NGIMVVDDYGHHPAEIRATLGAARNGWPERRLVVAFQPHRYSRTKELFNEFVTCFYDADVLVLTDIYAASEQPIPGVSAE RLAEETRRHGQRDVTYIADRNDLPDYLAGIVKEGDIVITLGAGNIWQAGEALVKRL >Mature_456_residues MYGNIEKIHFVGIGGIGMSGIAEVLLNLGYQVSGSDLRESDTTERLRSLGGEICIGHAAENLTNVDVVVTSTAVQSDNPE VIEAKHRMVPVIPRAEMLAELMRMKYGIAIAGTHGKTTTTSMVATVLTHAGIDPTIVIGGKLNTLGSNAKLGQGKFLVAE ADESDGSFLTLSPTIAVVTNIDADHLDYYTGGLEQIKDTFVSFINKVPFYGLAVLCQEDRNINEIIPRIKKRFMTYGLSS QADLRATHVKLDGFQTTFTAHYKGYRLGEISFNMPGAHNVLNALACTAVALELDVPFDKIQEGFAQFGGVGRRFTVKGEK NGIMVVDDYGHHPAEIRATLGAARNGWPERRLVVAFQPHRYSRTKELFNEFVTCFYDADVLVLTDIYAASEQPIPGVSAE RLAEETRRHGQRDVTYIADRNDLPDYLAGIVKEGDIVITLGAGNIWQAGEALVKRL
Specific function: Cell wall formation
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family
Homologues:
Organism=Escherichia coli, GI1786279, Length=459, Percent_Identity=46.4052287581699, Blast_Score=380, Evalue=1e-107, Organism=Escherichia coli, GI1790680, Length=353, Percent_Identity=30.5949008498584, Blast_Score=155, Evalue=6e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURC_GEOLS (B3E3Y1)
Other databases:
- EMBL: CP001089 - RefSeq: YP_001950915.1 - ProteinModelPortal: B3E3Y1 - SMR: B3E3Y1 - GeneID: 6369083 - GenomeReviews: CP001089_GR - KEGG: glo:Glov_0669 - HOGENOM: HBG476594 - OMA: YQPHRYS - ProtClustDB: PRK00421 - GO: GO:0005737 - HAMAP: MF_00046 - InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 - Gene3D: G3DSA:3.90.190.20 - Gene3D: G3DSA:3.40.1190.10 - Gene3D: G3DSA:3.40.50.720 - TIGRFAMs: TIGR01082
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; SSF53244 Mur_ligase_C; SSF53623 Mur_ligase_cen
EC number: =6.3.2.8
Molecular weight: Translated: 49749; Mature: 49749
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGNIEKIHFVGIGGIGMSGIAEVLLNLGYQVSGSDLRESDTTERLRSLGGEICIGHAAE CCCCEEEEEEEEECCCCHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHCCCCEEEECCCC NLTNVDVVVTSTAVQSDNPEVIEAKHRMVPVIPRAEMLAELMRMKYGIAIAGTHGKTTTT CCCCEEEEEEEEEECCCCCHHEECCCCEEECCCHHHHHHHHHHHHCCEEEEECCCCCHHH SMVATVLTHAGIDPTIVIGGKLNTLGSNAKLGQGKFLVAEADESDGSFLTLSPTIAVVTN HHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCEEEEEEE IDADHLDYYTGGLEQIKDTFVSFINKVPFYGLAVLCQEDRNINEIIPRIKKRFMTYGLSS CCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCC QADLRATHVKLDGFQTTFTAHYKGYRLGEISFNMPGAHNVLNALACTAVALELDVPFDKI CCCCEEEEEEECCCEEEEEEEECCEEEEEEEECCCCHHHHHHHHHHHHEEEEECCCHHHH QEGFAQFGGVGRRFTVKGEKNGIMVVDDYGHHPAEIRATLGAARNGWPERRLVVAFQPHR HHHHHHHCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCC YSRTKELFNEFVTCFYDADVLVLTDIYAASEQPIPGVSAERLAEETRRHGQRDVTYIADR CHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECC NDLPDYLAGIVKEGDIVITLGAGNIWQAGEALVKRL CCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCC >Mature Secondary Structure MYGNIEKIHFVGIGGIGMSGIAEVLLNLGYQVSGSDLRESDTTERLRSLGGEICIGHAAE CCCCEEEEEEEEECCCCHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHCCCCEEEECCCC NLTNVDVVVTSTAVQSDNPEVIEAKHRMVPVIPRAEMLAELMRMKYGIAIAGTHGKTTTT CCCCEEEEEEEEEECCCCCHHEECCCCEEECCCHHHHHHHHHHHHCCEEEEECCCCCHHH SMVATVLTHAGIDPTIVIGGKLNTLGSNAKLGQGKFLVAEADESDGSFLTLSPTIAVVTN HHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCEEEEEEE IDADHLDYYTGGLEQIKDTFVSFINKVPFYGLAVLCQEDRNINEIIPRIKKRFMTYGLSS CCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCC QADLRATHVKLDGFQTTFTAHYKGYRLGEISFNMPGAHNVLNALACTAVALELDVPFDKI CCCCEEEEEEECCCEEEEEEEECCEEEEEEEECCCCHHHHHHHHHHHHEEEEECCCHHHH QEGFAQFGGVGRRFTVKGEKNGIMVVDDYGHHPAEIRATLGAARNGWPERRLVVAFQPHR HHHHHHHCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCC YSRTKELFNEFVTCFYDADVLVLTDIYAASEQPIPGVSAERLAEETRRHGQRDVTYIADR CHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECC NDLPDYLAGIVKEGDIVITLGAGNIWQAGEALVKRL CCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA