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The map label for this gene is fadF [H]

Identifier: 189423640

GI number: 189423640

Start: 550038

End: 552005

Strand: Reverse

Name: fadF [H]

Synonym: Glov_0570

Alternate gene names: 189423640

Gene position: 552005-550038 (Counterclockwise)

Preceding gene: 189423641

Following gene: 189423627

Centisome position: 14.09

GC content: 60.82

Gene sequence:

>1968_bases
ATGACACCAACCCCGACCATTTTCGCACCACTCTTTATTGCCGCCACGGCCCTGTTTGTCTGGAGCTGCTGGAAACGACT
CTCACTGACCGCCCTGGGACGCCCTGAAGAACGGCTGGACAACATCGGCCAGCGGATCGGCGACACCCTGAGTTACGCCT
TTGCCCAGAAGCGGGTGCTGGCCAAGCCGTCCGGCCTGATCCATGTGGCCATCTTCTGGTGTTTCCTGGTCCTGATGATT
GCCAACACCGAATTCCTGCTGCACGGTCTGTTTCCAGCCGTCAACTTCACCAGGCTGCCGGACGGCATCTTCATGCCGCT
GATGCAGATGATTGACGTGGTCTCACTGATTACCCTGCTGGCTGTGACAGCTGCTGCCATCAGACGGCTGGTGGCCCCTC
CCTATCCCGAGGCCCGGACCTTTGAGGCGTTCTTCATCCTGTTTCTGATCGCCACCCTGATGCTGGCAAACTTCGGCGTG
AACGCCGCCAAGATCTCCCGCATGCAGGGCAGCACCCTGGTGCTGGCAGAGAGCATCATGCCGATCTCCAGCTGGTTTGC
CCCCTATGTGCCTTCCGGGGCCGGCAAGCTGGTGCATGACCTCTCCTGGTGGACCCACGCCCTGGTGCTGCTGCTGTTCA
TGAACCTGCTGCCGCTCAGCAAACATTTCCATATCATCACCGCCATCCCCAACGTGTTTCTGCGGCGGCGCGAACATCCG
CCCCTGCCGGAGCGGGAAGAGTTCAGCGCCGGCAACAGCTTCGGGATTAACCGGGTTGACGGCTACACCTGGAAAGAACT
GCTGGACGCCTTCTCTTGTACCGAGTGCGGCCGCTGCCAGATGGCCTGTCCGGCAGACCAGACCGGTAAGCCGCTGAATC
CACGCAGGGTGATTGCCCAGCTCAAGCACAACCTGATGGCCAACGGTCCGCTGCTGAAACAGGGGCAACCAGCCGGCACT
CCCCTGATCGGCGAAGGTGACGCCTCCATCTCTGAAGAGGCGATCTGGGCCTGCACCACCTGCGGCGCCTGCCTGCAATC
CTGCCCGGTCTTTATTGAGCAGATGCCCAAGCTGATCCCGCTGCGCAGGCATCTGGTTGAGATGGAGTCAAAATTCCCGG
AAGAGCTGCTGAACCTGTTTGAAAACATGGAGGGACGCAGCAACCCCTGGGGCATCGCCCCCACCGAGCGGGGCAAGTGG
GCCAGCCAGCTGGGTGATCGCCCCTATGAACCGGGCAAGTCCGAGTACCTCTTCTATGTCGGCTGTGCCGGTTCCTTTGA
TGCCCGGGCCAAGCAGATTACCGTGGCCACCGCCCTGTTGCTGGACAAGGCCGGGGTATCCTGGGGCATGCTGGGCAAGG
ATGAGAAATGCTGCGGTGACTCACTGCGCAGACTGGGCAATGAATATGTCTTTGACAAGCTGGCCAAGGAGAATGTGGCC
CTGTTCAAGGAACGGGGGATCAGGAAGGTGATTGTGCAGTGCCCCCACTGCCTGACCACCCTGAAAAACGACTACAGGCA
GTACGGTATCGAACTGGAGGTGATCCACCACAGCCAGCTGCTGCTGTATCTGGTGCAGGATGGCCGCCTGAAGCTGCCCA
AGCAGGCCGATCTGGGCAAGCTGGTCTACCATGATTCCTGCTACCTGGGACGCCACAACAACATCTACGACGAGCCCCGC
GAGGCATTGGCCCTTGCCACCGGTGCAGAGCCGCTGGAGATGCCCCGCAACCGTGAAGACGGCTTCTGCTGCGGCGCCGG
TGGCGGCCGGATGTGGATGGAAGAGTTTACCGGCGACCGGATCAACCTGGTGCGGGCAGCCGAGGCACTGGAGCAGCAGC
CTGATACAATCTGTACCGCCTGCCCCTACTGTCTGACCATGCTGGATGACGGCATCAAGGACCTGAAGGCCGAAAAGGTA
CAGGTGAAGGATATTGCAGAGGTGATGGCCGAGGCGGTACTGCGGTAG

Upstream 100 bases:

>100_bases
TTTTTGAAGTGGCCCATTACGGCATTGTCGGCGATCTGTTCCAGATTGTACCCGTCCTGACGCGTAAAATTCGTGAGCTG
AAAACACGAGGCAAAAAACC

Downstream 100 bases:

>100_bases
ACAAATACCCTTGAAACAATTGATTGTTTTGCATCAACCTCTTTAAGCCTCCCCTTGCCAGGGGAGGCTTAAAGGCTTTA
AAAGGTTCCCCCTGGTACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 655; Mature: 654

Protein sequence:

>655_residues
MTPTPTIFAPLFIAATALFVWSCWKRLSLTALGRPEERLDNIGQRIGDTLSYAFAQKRVLAKPSGLIHVAIFWCFLVLMI
ANTEFLLHGLFPAVNFTRLPDGIFMPLMQMIDVVSLITLLAVTAAAIRRLVAPPYPEARTFEAFFILFLIATLMLANFGV
NAAKISRMQGSTLVLAESIMPISSWFAPYVPSGAGKLVHDLSWWTHALVLLLFMNLLPLSKHFHIITAIPNVFLRRREHP
PLPEREEFSAGNSFGINRVDGYTWKELLDAFSCTECGRCQMACPADQTGKPLNPRRVIAQLKHNLMANGPLLKQGQPAGT
PLIGEGDASISEEAIWACTTCGACLQSCPVFIEQMPKLIPLRRHLVEMESKFPEELLNLFENMEGRSNPWGIAPTERGKW
ASQLGDRPYEPGKSEYLFYVGCAGSFDARAKQITVATALLLDKAGVSWGMLGKDEKCCGDSLRRLGNEYVFDKLAKENVA
LFKERGIRKVIVQCPHCLTTLKNDYRQYGIELEVIHHSQLLLYLVQDGRLKLPKQADLGKLVYHDSCYLGRHNNIYDEPR
EALALATGAEPLEMPRNREDGFCCGAGGGRMWMEEFTGDRINLVRAAEALEQQPDTICTACPYCLTMLDDGIKDLKAEKV
QVKDIAEVMAEAVLR

Sequences:

>Translated_655_residues
MTPTPTIFAPLFIAATALFVWSCWKRLSLTALGRPEERLDNIGQRIGDTLSYAFAQKRVLAKPSGLIHVAIFWCFLVLMI
ANTEFLLHGLFPAVNFTRLPDGIFMPLMQMIDVVSLITLLAVTAAAIRRLVAPPYPEARTFEAFFILFLIATLMLANFGV
NAAKISRMQGSTLVLAESIMPISSWFAPYVPSGAGKLVHDLSWWTHALVLLLFMNLLPLSKHFHIITAIPNVFLRRREHP
PLPEREEFSAGNSFGINRVDGYTWKELLDAFSCTECGRCQMACPADQTGKPLNPRRVIAQLKHNLMANGPLLKQGQPAGT
PLIGEGDASISEEAIWACTTCGACLQSCPVFIEQMPKLIPLRRHLVEMESKFPEELLNLFENMEGRSNPWGIAPTERGKW
ASQLGDRPYEPGKSEYLFYVGCAGSFDARAKQITVATALLLDKAGVSWGMLGKDEKCCGDSLRRLGNEYVFDKLAKENVA
LFKERGIRKVIVQCPHCLTTLKNDYRQYGIELEVIHHSQLLLYLVQDGRLKLPKQADLGKLVYHDSCYLGRHNNIYDEPR
EALALATGAEPLEMPRNREDGFCCGAGGGRMWMEEFTGDRINLVRAAEALEQQPDTICTACPYCLTMLDDGIKDLKAEKV
QVKDIAEVMAEAVLR
>Mature_654_residues
TPTPTIFAPLFIAATALFVWSCWKRLSLTALGRPEERLDNIGQRIGDTLSYAFAQKRVLAKPSGLIHVAIFWCFLVLMIA
NTEFLLHGLFPAVNFTRLPDGIFMPLMQMIDVVSLITLLAVTAAAIRRLVAPPYPEARTFEAFFILFLIATLMLANFGVN
AAKISRMQGSTLVLAESIMPISSWFAPYVPSGAGKLVHDLSWWTHALVLLLFMNLLPLSKHFHIITAIPNVFLRRREHPP
LPEREEFSAGNSFGINRVDGYTWKELLDAFSCTECGRCQMACPADQTGKPLNPRRVIAQLKHNLMANGPLLKQGQPAGTP
LIGEGDASISEEAIWACTTCGACLQSCPVFIEQMPKLIPLRRHLVEMESKFPEELLNLFENMEGRSNPWGIAPTERGKWA
SQLGDRPYEPGKSEYLFYVGCAGSFDARAKQITVATALLLDKAGVSWGMLGKDEKCCGDSLRRLGNEYVFDKLAKENVAL
FKERGIRKVIVQCPHCLTTLKNDYRQYGIELEVIHHSQLLLYLVQDGRLKLPKQADLGKLVYHDSCYLGRHNNIYDEPRE
ALALATGAEPLEMPRNREDGFCCGAGGGRMWMEEFTGDRINLVRAAEALEQQPDTICTACPYCLTMLDDGIKDLKAEKVQ
VKDIAEVMAEAVLR

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 73052; Mature: 72921

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPTPTIFAPLFIAATALFVWSCWKRLSLTALGRPEERLDNIGQRIGDTLSYAFAQKRVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AKPSGLIHVAIFWCFLVLMIANTEFLLHGLFPAVNFTRLPDGIFMPLMQMIDVVSLITLL
CCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
AVTAAAIRRLVAPPYPEARTFEAFFILFLIATLMLANFGVNAAKISRMQGSTLVLAESIM
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEHHHHHH
PISSWFAPYVPSGAGKLVHDLSWWTHALVLLLFMNLLPLSKHFHIITAIPNVFLRRREHP
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
PLPEREEFSAGNSFGINRVDGYTWKELLDAFSCTECGRCQMACPADQTGKPLNPRRVIAQ
CCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LKHNLMANGPLLKQGQPAGTPLIGEGDASISEEAIWACTTCGACLQSCPVFIEQMPKLIP
HHHHHHCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRRHLVEMESKFPEELLNLFENMEGRSNPWGIAPTERGKWASQLGDRPYEPGKSEYLFYV
HHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEE
GCAGSFDARAKQITVATALLLDKAGVSWGMLGKDEKCCGDSLRRLGNEYVFDKLAKENVA
ECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LFKERGIRKVIVQCPHCLTTLKNDYRQYGIELEVIHHSQLLLYLVQDGRLKLPKQADLGK
HHHHCCHHHHHHHCHHHHHHHHHHHHHHCCEEEEEECCCEEEEEECCCCCCCCCCCCCCH
LVYHDSCYLGRHNNIYDEPREALALATGAEPLEMPRNREDGFCCGAGGGRMWMEEFTGDR
HEEECCEEECCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCEEECCCCCHHHHHHHCCCH
INLVRAAEALEQQPDTICTACPYCLTMLDDGIKDLKAEKVQVKDIAEVMAEAVLR
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TPTPTIFAPLFIAATALFVWSCWKRLSLTALGRPEERLDNIGQRIGDTLSYAFAQKRVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AKPSGLIHVAIFWCFLVLMIANTEFLLHGLFPAVNFTRLPDGIFMPLMQMIDVVSLITLL
CCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
AVTAAAIRRLVAPPYPEARTFEAFFILFLIATLMLANFGVNAAKISRMQGSTLVLAESIM
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEHHHHHH
PISSWFAPYVPSGAGKLVHDLSWWTHALVLLLFMNLLPLSKHFHIITAIPNVFLRRREHP
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
PLPEREEFSAGNSFGINRVDGYTWKELLDAFSCTECGRCQMACPADQTGKPLNPRRVIAQ
CCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LKHNLMANGPLLKQGQPAGTPLIGEGDASISEEAIWACTTCGACLQSCPVFIEQMPKLIP
HHHHHHCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRRHLVEMESKFPEELLNLFENMEGRSNPWGIAPTERGKWASQLGDRPYEPGKSEYLFYV
HHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEE
GCAGSFDARAKQITVATALLLDKAGVSWGMLGKDEKCCGDSLRRLGNEYVFDKLAKENVA
ECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LFKERGIRKVIVQCPHCLTTLKNDYRQYGIELEVIHHSQLLLYLVQDGRLKLPKQADLGK
HHHHCCHHHHHHHCHHHHHHHHHHHHHHCCEEEEEECCCEEEEEECCCCCCCCCCCCCCH
LVYHDSCYLGRHNNIYDEPREALALATGAEPLEMPRNREDGFCCGAGGGRMWMEEFTGDR
HEEECCEEECCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCEEECCCCCHHHHHHHCCCH
INLVRAAEALEQQPDTICTACPYCLTMLDDGIKDLKAEKVQVKDIAEVMAEAVLR
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]