Definition Geobacter lovleyi SZ chromosome, complete genome.
Accession NC_010814
Length 3,917,761

Click here to switch to the map view.

The map label for this gene is ygjT [C]

Identifier: 189423621

GI number: 189423621

Start: 520954

End: 521892

Strand: Reverse

Name: ygjT [C]

Synonym: Glov_0550

Alternate gene names: 189423621

Gene position: 521892-520954 (Counterclockwise)

Preceding gene: 189423622

Following gene: 189423620

Centisome position: 13.32

GC content: 54.53

Gene sequence:

>939_bases
ATGTCACCTACCACCATCATGTGGATCGTCTTTGCAGCCCTGATCAGCTTTATGCTGGTCATAGACCTGAGCCTGAACCG
CAAGAGCGGCCGGGTCAGCTTCAAAAAAGCAGCCACCTGGACCGTGGTCTGGATGCTTCTGGCTCTGCTGTTCGGTGGCG
GAATCTGGTACACCATGGGCCAGCAGAAGGCACTGGAGTTTCTGACCGGCTACCTGATTGAACAGTCGCTCTCAGTGGAC
AACCTGTTTGTCTTCATCATGATCTTCACGGTCTTCGGGGTACGGGGTGAACTGCAGGCCAAGGTTTTGAAATGGGGTAT
TCTGGGTGCCATCGTAATGCGGCTGGTCTTCATCTTCATCGGCGCAGCACTGCTGAAAGAGTTCCAATGGCTTTTCTATA
TCTTTGGCGCACTACTGGTCTACACCGCCTGGAAGATGGCCTTCAGCGGCGATGACGAGATTGAGCCGGACAAGAACCCG
CTGGTCAAGCTGGCCCGCCGCTTCCTGCCGATGACCAAGCGGATCCGTGGCGACTGGTTTATTACCCGTCGCATGCAGCT
CTGGATTGCCAGTCCACTCTTCATGGTACTGCTGGTGGTGGAGAGCAGCGACCTGGTCTTTGCCATGGACTCGATTCCGG
CCATCTTTGCCATTACCCTGGACCCGTTTATCGTACTGACCTCCAACGTCTTTGCCATCATGGGACTCAGATCGCTCTTC
TTTCTGCTCTCGAACCTGATGGGGATGTTTGCCTACCTGAAGTTCGGCATCGCCCTGATCCTGGCCTTTGTGGGGGTCAA
GATGATCCTGATGATGCTGGGGTTCCATATTCCGATCAGTCTGTCACTGGCAGTGATTGTGGTGACCCTGGCGATCGCAG
TGGTTGCCTCACTACTTTTACGGAAACCGGAAACCGATGAGTTGCTGGAAACAGCTTGA

Upstream 100 bases:

>100_bases
GCTGGATTCACCGCACTGCCGGCTTCATGTTTCTGGTGTTTGGCGTTGCCATGGGCTGGCGCCTGTTCTCACTCTAAACA
GTTGTTGTAAAGGAACTACC

Downstream 100 bases:

>100_bases
CAAACAGTACGCCAATTCCCTACTGTAACGGTATGCTACAAACACGTATCCGCATAATCAGCACAACCCTGTTGAGCATA
CTGGCACTGGCAACGATCCT

Product: integral membrane protein TerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MSPTTIMWIVFAALISFMLVIDLSLNRKSGRVSFKKAATWTVVWMLLALLFGGGIWYTMGQQKALEFLTGYLIEQSLSVD
NLFVFIMIFTVFGVRGELQAKVLKWGILGAIVMRLVFIFIGAALLKEFQWLFYIFGALLVYTAWKMAFSGDDEIEPDKNP
LVKLARRFLPMTKRIRGDWFITRRMQLWIASPLFMVLLVVESSDLVFAMDSIPAIFAITLDPFIVLTSNVFAIMGLRSLF
FLLSNLMGMFAYLKFGIALILAFVGVKMILMMLGFHIPISLSLAVIVVTLAIAVVASLLLRKPETDELLETA

Sequences:

>Translated_312_residues
MSPTTIMWIVFAALISFMLVIDLSLNRKSGRVSFKKAATWTVVWMLLALLFGGGIWYTMGQQKALEFLTGYLIEQSLSVD
NLFVFIMIFTVFGVRGELQAKVLKWGILGAIVMRLVFIFIGAALLKEFQWLFYIFGALLVYTAWKMAFSGDDEIEPDKNP
LVKLARRFLPMTKRIRGDWFITRRMQLWIASPLFMVLLVVESSDLVFAMDSIPAIFAITLDPFIVLTSNVFAIMGLRSLF
FLLSNLMGMFAYLKFGIALILAFVGVKMILMMLGFHIPISLSLAVIVVTLAIAVVASLLLRKPETDELLETA
>Mature_311_residues
SPTTIMWIVFAALISFMLVIDLSLNRKSGRVSFKKAATWTVVWMLLALLFGGGIWYTMGQQKALEFLTGYLIEQSLSVDN
LFVFIMIFTVFGVRGELQAKVLKWGILGAIVMRLVFIFIGAALLKEFQWLFYIFGALLVYTAWKMAFSGDDEIEPDKNPL
VKLARRFLPMTKRIRGDWFITRRMQLWIASPLFMVLLVVESSDLVFAMDSIPAIFAITLDPFIVLTSNVFAIMGLRSLFF
LLSNLMGMFAYLKFGIALILAFVGVKMILMMLGFHIPISLSLAVIVVTLAIAVVASLLLRKPETDELLETA

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the terC family [H]

Homologues:

Organism=Escherichia coli, GI48994922, Length=293, Percent_Identity=47.7815699658703, Blast_Score=263, Evalue=1e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496
- InterPro:   IPR022369 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 35157; Mature: 35026

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPTTIMWIVFAALISFMLVIDLSLNRKSGRVSFKKAATWTVVWMLLALLFGGGIWYTMG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECC
QQKALEFLTGYLIEQSLSVDNLFVFIMIFTVFGVRGELQAKVLKWGILGAIVMRLVFIFI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GAALLKEFQWLFYIFGALLVYTAWKMAFSGDDEIEPDKNPLVKLARRFLPMTKRIRGDWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHH
ITRRMQLWIASPLFMVLLVVESSDLVFAMDSIPAIFAITLDPFIVLTSNVFAIMGLRSLF
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEHHCHHHHHHHHHHHHHHHHHHH
FLLSNLMGMFAYLKFGIALILAFVGVKMILMMLGFHIPISLSLAVIVVTLAIAVVASLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
RKPETDELLETA
CCCCHHHHHHCC
>Mature Secondary Structure 
SPTTIMWIVFAALISFMLVIDLSLNRKSGRVSFKKAATWTVVWMLLALLFGGGIWYTMG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECC
QQKALEFLTGYLIEQSLSVDNLFVFIMIFTVFGVRGELQAKVLKWGILGAIVMRLVFIFI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GAALLKEFQWLFYIFGALLVYTAWKMAFSGDDEIEPDKNPLVKLARRFLPMTKRIRGDWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHH
ITRRMQLWIASPLFMVLLVVESSDLVFAMDSIPAIFAITLDPFIVLTSNVFAIMGLRSLF
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEHHCHHHHHHHHHHHHHHHHHHH
FLLSNLMGMFAYLKFGIALILAFVGVKMILMMLGFHIPISLSLAVIVVTLAIAVVASLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
RKPETDELLETA
CCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA