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The map label for this gene is ccsB [H]

Identifier: 189423619

GI number: 189423619

Start: 519088

End: 520473

Strand: Reverse

Name: ccsB [H]

Synonym: Glov_0548

Alternate gene names: 189423619

Gene position: 520473-519088 (Counterclockwise)

Preceding gene: 189423620

Following gene: 189423618

Centisome position: 13.28

GC content: 58.95

Gene sequence:

>1386_bases
ATGACGACTGAACACCGTTCGGTCAGCGACAAGGTCATGCAGACCCTTGCCTCGCTGCGCCTGACCATGGCTGTACTGAT
TCTGCTGGCCCTGGTTTCCATCATCGGGACCGTTATTCCCCAGGGGCAACTGCCCCCTGAATATGTCGCATCCATCGGCG
GTGAACAGGGCAACCGTTTCCGCCTCTATGCCTTGCTCGGCTTCTTTGACATGTACCACGCCTGGTGGTTTCAGGGGCTT
TTGGCCCTGCTGTCGATCAACCTGCTGGCCTGCACCATCAAACGACTGCCCCATGTCTGGCGGATCGCCACCAGACCGGA
CATCACCCTCAGCAGCGCCCAGGAAGCAGCCGCCACCTGCAGCGCTGTTTTAACCGTCCCGGAATCTGTTGACCGTGCCA
GACTGACCGCAGCGATCGCTGCCGTTGCAGGCAAACCGGTACTGACCGAAAAGGATCATGAACTGCACCTGTTTGTGCAG
CAGCGCCCCTGGGCCAGACTGGCGGTCTATGGCGTACATGCCAGCGTGATCCTGATCTTCATTGGCGCCATTATCGGTAA
TATCTTCGGTTTCAAGGGCTTTGTGGCCATACCGGAAGGCAGTACCGTCTCCAGCTTCACCGACCGCAAAGGGCAGCAGC
GGCCGCTCGGTTTTGAGCTGCGCTGCGACCAGTTTACGGTCAGTTTCTATGATGCCCCCGGTGGCGGCCCCAGTCAGATG
CCCAAAGAGTTCAAGAGCATCCTGACTCTTACCGAGAATGGCAAGGAGATTCCCGGCTACAAACATGCCCGCCTGATCGT
CAACGATCCGTTGACCTACAAGGGGATCACCTTTTATCAGTCCAGTTACGGCACCACTGGTAACCACACCTTTACCGTCG
GTACCACACGCCTGACGGTCGGCAGTGAAGAAACCGCCCATCTGCCGGACGGCAGCAGCATGCACCTGATTGAGGCGGTA
CAGGATGTCTCGCCATTCCTGCCGGGCAAGACCGGACCGGCGGCCAGGATTGACGTGCATCCCGCCAATGGCGGCGCAGC
AGTGACCTTGTTGAGCCTTGCCAACTACCCTGAAGAGAACAGACGTGAGGCAGCCAAACACAACCTGCCGGTCATCACCT
ACCAGGGTGGCACCGAACGCCCGTATACCGGCCTGCAGGTCAACAAGGACCCCGGTGTCTGGGTGGTCTGGATCGGCAGC
CTGCTGATGTGCGTCGGGCTGTATGTAGCCTTTTTCCTGCCGCACCAGCGGATCTGGTTCAGATTTGGCCAGGGCAGACT
GGTGATTGCCGGTCATACCACCAAGTCCCAGGCAGCCTTCCGTCAGCGCATTGAGCGGATCGAACAACAACTGAAGGCAA
CACTGCAGCAGGAGGAGACACGATGA

Upstream 100 bases:

>100_bases
CTCTCCTGACTGTAATCACAGCATCCTAGCGGCATTTTCTGCCTGTTCCTTTGCGCCACCTGGCTGCAAAGACTGATTAT
CTGTTTCAGGAGATCCACCT

Downstream 100 bases:

>100_bases
ACAGCGGATCATTGATGAACGGTACCACCATCTTCTACATGCTCTCCACCCTGGCCTTCTTCATCTACCTGGCCGGGCGC
AACAAGCAGATCGGCCTGGC

Product: ResB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MTTEHRSVSDKVMQTLASLRLTMAVLILLALVSIIGTVIPQGQLPPEYVASIGGEQGNRFRLYALLGFFDMYHAWWFQGL
LALLSINLLACTIKRLPHVWRIATRPDITLSSAQEAAATCSAVLTVPESVDRARLTAAIAAVAGKPVLTEKDHELHLFVQ
QRPWARLAVYGVHASVILIFIGAIIGNIFGFKGFVAIPEGSTVSSFTDRKGQQRPLGFELRCDQFTVSFYDAPGGGPSQM
PKEFKSILTLTENGKEIPGYKHARLIVNDPLTYKGITFYQSSYGTTGNHTFTVGTTRLTVGSEETAHLPDGSSMHLIEAV
QDVSPFLPGKTGPAARIDVHPANGGAAVTLLSLANYPEENRREAAKHNLPVITYQGGTERPYTGLQVNKDPGVWVVWIGS
LLMCVGLYVAFFLPHQRIWFRFGQGRLVIAGHTTKSQAAFRQRIERIEQQLKATLQQEETR

Sequences:

>Translated_461_residues
MTTEHRSVSDKVMQTLASLRLTMAVLILLALVSIIGTVIPQGQLPPEYVASIGGEQGNRFRLYALLGFFDMYHAWWFQGL
LALLSINLLACTIKRLPHVWRIATRPDITLSSAQEAAATCSAVLTVPESVDRARLTAAIAAVAGKPVLTEKDHELHLFVQ
QRPWARLAVYGVHASVILIFIGAIIGNIFGFKGFVAIPEGSTVSSFTDRKGQQRPLGFELRCDQFTVSFYDAPGGGPSQM
PKEFKSILTLTENGKEIPGYKHARLIVNDPLTYKGITFYQSSYGTTGNHTFTVGTTRLTVGSEETAHLPDGSSMHLIEAV
QDVSPFLPGKTGPAARIDVHPANGGAAVTLLSLANYPEENRREAAKHNLPVITYQGGTERPYTGLQVNKDPGVWVVWIGS
LLMCVGLYVAFFLPHQRIWFRFGQGRLVIAGHTTKSQAAFRQRIERIEQQLKATLQQEETR
>Mature_460_residues
TTEHRSVSDKVMQTLASLRLTMAVLILLALVSIIGTVIPQGQLPPEYVASIGGEQGNRFRLYALLGFFDMYHAWWFQGLL
ALLSINLLACTIKRLPHVWRIATRPDITLSSAQEAAATCSAVLTVPESVDRARLTAAIAAVAGKPVLTEKDHELHLFVQQ
RPWARLAVYGVHASVILIFIGAIIGNIFGFKGFVAIPEGSTVSSFTDRKGQQRPLGFELRCDQFTVSFYDAPGGGPSQMP
KEFKSILTLTENGKEIPGYKHARLIVNDPLTYKGITFYQSSYGTTGNHTFTVGTTRLTVGSEETAHLPDGSSMHLIEAVQ
DVSPFLPGKTGPAARIDVHPANGGAAVTLLSLANYPEENRREAAKHNLPVITYQGGTERPYTGLQVNKDPGVWVVWIGSL
LMCVGLYVAFFLPHQRIWFRFGQGRLVIAGHTTKSQAAFRQRIERIEQQLKATLQQEETR

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG1333

COG function: function code O; ResB protein required for cytochrome c biosynthesis

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccs1/ccsB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007816 [H]

Pfam domain/function: PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 50679; Mature: 50548

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTEHRSVSDKVMQTLASLRLTMAVLILLALVSIIGTVIPQGQLPPEYVASIGGEQGNRF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEE
RLYALLGFFDMYHAWWFQGLLALLSINLLACTIKRLPHVWRIATRPDITLSSAQEAAATC
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCHHHHHHHH
SAVLTVPESVDRARLTAAIAAVAGKPVLTEKDHELHLFVQQRPWARLAVYGVHASVILIF
HHEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEEHHHHHHHHHH
IGAIIGNIFGFKGFVAIPEGSTVSSFTDRKGQQRPLGFELRCDQFTVSFYDAPGGGPSQM
HHHHHHHHHCCCCEEECCCCCCCCHHHHCCCCCCCCCEEEEECEEEEEEEECCCCCHHHH
PKEFKSILTLTENGKEIPGYKHARLIVNDPLTYKGITFYQSSYGTTGNHTFTVGTTRLTV
HHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCEEEEEEEEEEEE
GSEETAHLPDGSSMHLIEAVQDVSPFLPGKTGPAARIDVHPANGGAAVTLLSLANYPEEN
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHEEEEHHHCCCHHH
RREAAKHNLPVITYQGGTERPYTGLQVNKDPGVWVVWIGSLLMCVGLYVAFFLPHQRIWF
HHHHHHCCCCEEEECCCCCCCCCCEEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEE
RFGQGRLVIAGHTTKSQAAFRQRIERIEQQLKATLQQEETR
EECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTEHRSVSDKVMQTLASLRLTMAVLILLALVSIIGTVIPQGQLPPEYVASIGGEQGNRF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEE
RLYALLGFFDMYHAWWFQGLLALLSINLLACTIKRLPHVWRIATRPDITLSSAQEAAATC
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCHHHHHHHH
SAVLTVPESVDRARLTAAIAAVAGKPVLTEKDHELHLFVQQRPWARLAVYGVHASVILIF
HHEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEEHHHHHHHHHH
IGAIIGNIFGFKGFVAIPEGSTVSSFTDRKGQQRPLGFELRCDQFTVSFYDAPGGGPSQM
HHHHHHHHHCCCCEEECCCCCCCCHHHHCCCCCCCCCEEEEECEEEEEEEECCCCCHHHH
PKEFKSILTLTENGKEIPGYKHARLIVNDPLTYKGITFYQSSYGTTGNHTFTVGTTRLTV
HHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCEEEEEEEEEEEE
GSEETAHLPDGSSMHLIEAVQDVSPFLPGKTGPAARIDVHPANGGAAVTLLSLANYPEEN
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHEEEEHHHCCCHHH
RREAAKHNLPVITYQGGTERPYTGLQVNKDPGVWVVWIGSLLMCVGLYVAFFLPHQRIWF
HHHHHHCCCCEEEECCCCCCCCCCEEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEE
RFGQGRLVIAGHTTKSQAAFRQRIERIEQQLKATLQQEETR
EECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA