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The map label for this gene is ccsA [H]

Identifier: 189423618

GI number: 189423618

Start: 518243

End: 519091

Strand: Reverse

Name: ccsA [H]

Synonym: Glov_0547

Alternate gene names: 189423618

Gene position: 519091-518243 (Counterclockwise)

Preceding gene: 189423619

Following gene: 189423617

Centisome position: 13.25

GC content: 58.54

Gene sequence:

>849_bases
ATGAACAGCGGATCATTGATGAACGGTACCACCATCTTCTACATGCTCTCCACCCTGGCCTTCTTCATCTACCTGGCCGG
GCGCAACAAGCAGATCGGCCTGGCAGGTTCCGTTCTGGCCTGGACCGGTTTTGCCCTCCAGACCGTCGCACTGGGGCTGC
GCTGGAAAGAGTCCTACGACATGGGAGTCGGCCATGCGCCGATGTCCAACCTGTACGAATCAGTGGTATTTTTTGCCTGG
AGCATCGTGCTGATCTTCGGGATCATTGATGCAAAATACCACTACCGGGTGATCGGCGCCTTTGTGATGCCGTTTGCCCT
GCTGGGCATGACCTGGGGCCAGCTCTACCTGCCCAGCGACATCAGTCCCTTGATGCCGGCCCTGCAGAGCAACTGGCTGA
CCTACCATGTCATCAGCTGCTTTCTGGGCTATGCCGCCTTTGCCGTGGCCTGCGGCGTCTCGATCATGTACCTGATCAAG
GCCAAAAGCGAAGCAAGCAGTACCGAACCTGCCGATGGAATCCTGTCGGTCTTTCCCCCCACCCGGGTGCTGGACGACCT
GAACTACAAGGCGATCATGGTCGGCTTTCCGCTTTTGACCCTGGGGATCATCACCGGTGCGGCCTGGGCCAACTATGCCT
GGGGCACCTACTGGAGCTGGGACCCCAAAGAGACCTGGTCGCTGATTGTCTGGTTTGTCTATGCCGCCTTCCTGCATGCC
CGCTTCACCAAGGGCTGGGTCGGCAAACGGGCAGCCTGGCTCTCGATCATCGGCTTTGCAGCCACCATTTTCTGCTACCT
GGGTGTCAACCTGCTGCTGTCCGGTCTACACAGCTACGGAGGAATGTAA

Upstream 100 bases:

>100_bases
TGATTGCCGGTCATACCACCAAGTCCCAGGCAGCCTTCCGTCAGCGCATTGAGCGGATCGAACAACAACTGAAGGCAACA
CTGCAGCAGGAGGAGACACG

Downstream 100 bases:

>100_bases
CCATGAAAAAACTGTTAATTCTGACTATCCTGGCCCTGGTCGGCATGCTGGCAGCCTGCAGCAGCGGTTCGCACAAGTCT
GTGCAGGCAGACGGCAGCGT

Product: cytochrome C biogenesis protein CcsB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MNSGSLMNGTTIFYMLSTLAFFIYLAGRNKQIGLAGSVLAWTGFALQTVALGLRWKESYDMGVGHAPMSNLYESVVFFAW
SIVLIFGIIDAKYHYRVIGAFVMPFALLGMTWGQLYLPSDISPLMPALQSNWLTYHVISCFLGYAAFAVACGVSIMYLIK
AKSEASSTEPADGILSVFPPTRVLDDLNYKAIMVGFPLLTLGIITGAAWANYAWGTYWSWDPKETWSLIVWFVYAAFLHA
RFTKGWVGKRAAWLSIIGFAATIFCYLGVNLLLSGLHSYGGM

Sequences:

>Translated_282_residues
MNSGSLMNGTTIFYMLSTLAFFIYLAGRNKQIGLAGSVLAWTGFALQTVALGLRWKESYDMGVGHAPMSNLYESVVFFAW
SIVLIFGIIDAKYHYRVIGAFVMPFALLGMTWGQLYLPSDISPLMPALQSNWLTYHVISCFLGYAAFAVACGVSIMYLIK
AKSEASSTEPADGILSVFPPTRVLDDLNYKAIMVGFPLLTLGIITGAAWANYAWGTYWSWDPKETWSLIVWFVYAAFLHA
RFTKGWVGKRAAWLSIIGFAATIFCYLGVNLLLSGLHSYGGM
>Mature_282_residues
MNSGSLMNGTTIFYMLSTLAFFIYLAGRNKQIGLAGSVLAWTGFALQTVALGLRWKESYDMGVGHAPMSNLYESVVFFAW
SIVLIFGIIDAKYHYRVIGAFVMPFALLGMTWGQLYLPSDISPLMPALQSNWLTYHVISCFLGYAAFAVACGVSIMYLIK
AKSEASSTEPADGILSVFPPTRVLDDLNYKAIMVGFPLLTLGIITGAAWANYAWGTYWSWDPKETWSLIVWFVYAAFLHA
RFTKGWVGKRAAWLSIIGFAATIFCYLGVNLLLSGLHSYGGM

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

Organism=Escherichia coli, GI1788524, Length=161, Percent_Identity=27.9503105590062, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 31147; Mature: 31147

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA