BacMap

Definition	Geobacter lovleyi SZ chromosome, complete genome.
Accession	NC_010814
Length	3,917,761

Click here to switch to the map view.

The map label for this gene is dnaJ [H]

Identifier: 189423590

GI number: 189423590

Start: 490885

End: 491781

Strand: Reverse

Name: dnaJ [H]

Synonym: Glov_0519

Alternate gene names: 189423590

Gene position: 491781-490885 (Counterclockwise)

Preceding gene: 189423591

Following gene: 189423589

Centisome position: 12.55

GC content: 59.09

Gene sequence:

>897_bases
ATGGCACAGAAAGACTACTACGAGGCACTGGGTGTTGCCAAGGATGCCTCAGCTGACGATATCAAGAAGGCATTCCGCAA
ACTGGCGGTCAAATACCACCCGGACCGCAACCAGGGCGATACAGCGGCAGAGGAGAAGTTCAAGGAGATCAACGAGGCCT
ATGCCGTCCTCTCCGACCCTGACAAACGCAAAAAGTACGACACCTTCGGTTCTTCTGACTTCCATCAGCAGTACAGCCAG
GAAGATATCTTCCGCAATTTTGACTTCTCCGGCACCTTCAAGGATATGGGCATGGGCGGTGGCGAAGATATTTTCTCGCG
CCTGTTCGGCGGTGCCTTTGGCCGGGGTGGGGGACGCGGTTTTGGCAAAGGCCCCCGTCAGGGGGGGGATCTTTCCCTGA
CCGTTGATGTCGGATTCCGCGATGCAGCCACCGGCGGCGAACGGCTGGTGGCCTTCCGCCGTAACGGCCAGCGTGAGGAG
CTGAAGGTAAAGATTCCGGCCGGGGTGGACAACGGCAGCAGGATCAGAATTGCCGGCAAGGGAAGCGACGGAGAAAACGG
CGGCCCCAATGGCGATCTCTATCTTGATATCCGGGTGGCCAATGATCCGGTCTTTACCCGCGACGGCGGCGACCTGTTTG
TGGAGCGCACCATCCGCTTCAGCGAGGCCTGCCTGGGGGTCAGCCTTGAAGTGCCCACCCTTGAAGAGCCCAAAAGGATC
AAGGTCCCGGCCGGCATCCAGCCCGGCACCAAGATCCGCCTGAAAGGATGCGGTATCAAGTCGCTTGGCTCCAATGCCAA
GGGCGATCTGTACGTCAAGATTAGCGTGCATGTGCCGGAAGGGCTGAACAGCAGTCAGAAAAAGCTGGTGGAAGAGCTGG
CCAGGGCAGGGCTCTGA

Upstream 100 bases:

>100_bases
TTGTATCATACACTTGGCAACCTGCCAGAACCTGAGGCTACCCACAGATTCTGCTGAAGAGCCAAATTGTTATGGGAAAT
GGATGAAAGGAGCAGTGACA

Downstream 100 bases:

>100_bases
ATCGCCGCTACTCTACCCGTCTTCTCCGCCCGAATGACGCAACATATTGTTTCTTGCAGTACTACCACCTGATTTTGTAT
AATTTTGGTATGGGATAGCA

Product: chaperone DnaJ domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MAQKDYYEALGVAKDASADDIKKAFRKLAVKYHPDRNQGDTAAEEKFKEINEAYAVLSDPDKRKKYDTFGSSDFHQQYSQ
EDIFRNFDFSGTFKDMGMGGGEDIFSRLFGGAFGRGGGRGFGKGPRQGGDLSLTVDVGFRDAATGGERLVAFRRNGQREE
LKVKIPAGVDNGSRIRIAGKGSDGENGGPNGDLYLDIRVANDPVFTRDGGDLFVERTIRFSEACLGVSLEVPTLEEPKRI
KVPAGIQPGTKIRLKGCGIKSLGSNAKGDLYVKISVHVPEGLNSSQKKLVEELARAGL

Sequences:

>Translated_298_residues
MAQKDYYEALGVAKDASADDIKKAFRKLAVKYHPDRNQGDTAAEEKFKEINEAYAVLSDPDKRKKYDTFGSSDFHQQYSQ
EDIFRNFDFSGTFKDMGMGGGEDIFSRLFGGAFGRGGGRGFGKGPRQGGDLSLTVDVGFRDAATGGERLVAFRRNGQREE
LKVKIPAGVDNGSRIRIAGKGSDGENGGPNGDLYLDIRVANDPVFTRDGGDLFVERTIRFSEACLGVSLEVPTLEEPKRI
KVPAGIQPGTKIRLKGCGIKSLGSNAKGDLYVKISVHVPEGLNSSQKKLVEELARAGL
>Mature_297_residues
AQKDYYEALGVAKDASADDIKKAFRKLAVKYHPDRNQGDTAAEEKFKEINEAYAVLSDPDKRKKYDTFGSSDFHQQYSQE
DIFRNFDFSGTFKDMGMGGGEDIFSRLFGGAFGRGGGRGFGKGPRQGGDLSLTVDVGFRDAATGGERLVAFRRNGQREEL
KVKIPAGVDNGSRIRIAGKGSDGENGGPNGDLYLDIRVANDPVFTRDGGDLFVERTIRFSEACLGVSLEVPTLEEPKRIK
VPAGIQPGTKIRLKGCGIKSLGSNAKGDLYVKISVHVPEGLNSSQKKLVEELARAGL

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI205360838, Length=351, Percent_Identity=31.3390313390313, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI205360840, Length=351, Percent_Identity=31.3390313390313, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI7706495, Length=338, Percent_Identity=32.2485207100592, Blast_Score=126, Evalue=3e-29,
Organism=Homo sapiens, GI6631085, Length=335, Percent_Identity=32.5373134328358, Blast_Score=125, Evalue=5e-29,
Organism=Homo sapiens, GI56549115, Length=344, Percent_Identity=29.3604651162791, Blast_Score=117, Evalue=9e-27,
Organism=Homo sapiens, GI201862518, Length=344, Percent_Identity=29.9418604651163, Blast_Score=117, Evalue=9e-27,
Organism=Homo sapiens, GI201862587, Length=344, Percent_Identity=29.9418604651163, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI5453690, Length=348, Percent_Identity=27.5862068965517, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI39204547, Length=317, Percent_Identity=27.7602523659306, Blast_Score=98, Evalue=7e-21,
Organism=Homo sapiens, GI72534740, Length=122, Percent_Identity=45.9016393442623, Blast_Score=95, Evalue=8e-20,
Organism=Homo sapiens, GI4504511, Length=279, Percent_Identity=30.8243727598566, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI194306642, Length=124, Percent_Identity=43.5483870967742, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI194306640, Length=124, Percent_Identity=43.5483870967742, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI9558755, Length=107, Percent_Identity=51.4018691588785, Blast_Score=92, Evalue=7e-19,
Organism=Homo sapiens, GI194328758, Length=285, Percent_Identity=28.4210526315789, Blast_Score=88, Evalue=8e-18,
Organism=Homo sapiens, GI194328760, Length=285, Percent_Identity=28.4210526315789, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI17388799, Length=109, Percent_Identity=45.8715596330275, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI4885495, Length=109, Percent_Identity=45.8715596330275, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI29126218, Length=89, Percent_Identity=48.314606741573, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI45504382, Length=89, Percent_Identity=46.0674157303371, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI22749377, Length=122, Percent_Identity=39.344262295082, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI23503241, Length=118, Percent_Identity=42.3728813559322, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI27151736, Length=66, Percent_Identity=57.5757575757576, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI47777312, Length=109, Percent_Identity=42.2018348623853, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI88501736, Length=66, Percent_Identity=57.5757575757576, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI21553335, Length=68, Percent_Identity=54.4117647058823, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI24308127, Length=96, Percent_Identity=43.75, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI68077168, Length=66, Percent_Identity=57.5757575757576, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI68077166, Length=66, Percent_Identity=57.5757575757576, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI56687498, Length=109, Percent_Identity=36.697247706422, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI5031741, Length=91, Percent_Identity=42.8571428571429, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI21361912, Length=78, Percent_Identity=42.3076923076923, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI27735107, Length=81, Percent_Identity=45.679012345679, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI221219056, Length=71, Percent_Identity=52.112676056338, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI262206280, Length=71, Percent_Identity=52.112676056338, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1787235, Length=306, Percent_Identity=35.2941176470588, Blast_Score=170, Evalue=8e-44,
Organism=Escherichia coli, GI1786197, Length=133, Percent_Identity=48.8721804511278, Blast_Score=135, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI17534355, Length=331, Percent_Identity=32.02416918429, Blast_Score=134, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI17554644, Length=117, Percent_Identity=44.4444444444444, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI212645553, Length=69, Percent_Identity=56.5217391304348, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI115532378, Length=67, Percent_Identity=58.2089552238806, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17538236, Length=117, Percent_Identity=41.8803418803419, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17568643, Length=91, Percent_Identity=45.0549450549451, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17507263, Length=347, Percent_Identity=26.2247838616715, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17553096, Length=138, Percent_Identity=31.8840579710145, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17553098, Length=138, Percent_Identity=31.8840579710145, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI115532476, Length=79, Percent_Identity=46.8354430379747, Blast_Score=72, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6324265, Length=155, Percent_Identity=37.4193548387097, Blast_Score=83, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6323870, Length=68, Percent_Identity=54.4117647058823, Blast_Score=82, Evalue=7e-17,
Organism=Saccharomyces cerevisiae, GI6322194, Length=66, Percent_Identity=51.5151515151515, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6324321, Length=64, Percent_Identity=53.125, Blast_Score=74, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6320888, Length=85, Percent_Identity=43.5294117647059, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6323119, Length=67, Percent_Identity=49.2537313432836, Blast_Score=71, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6322388, Length=110, Percent_Identity=41.8181818181818, Blast_Score=71, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6324252, Length=67, Percent_Identity=44.7761194029851, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6323813, Length=143, Percent_Identity=37.7622377622378, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6324103, Length=64, Percent_Identity=51.5625, Blast_Score=64, Evalue=4e-11,
Organism=Drosophila melanogaster, GI45549272, Length=360, Percent_Identity=28.3333333333333, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI45552813, Length=361, Percent_Identity=28.2548476454294, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI45552811, Length=361, Percent_Identity=27.9778393351801, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI85726398, Length=349, Percent_Identity=30.945558739255, Blast_Score=125, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24658562, Length=333, Percent_Identity=29.7297297297297, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI24658555, Length=333, Percent_Identity=29.7297297297297, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI18858081, Length=346, Percent_Identity=28.6127167630058, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI17737735, Length=83, Percent_Identity=48.1927710843374, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24668523, Length=83, Percent_Identity=48.1927710843374, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI28574723, Length=83, Percent_Identity=48.1927710843374, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24654066, Length=117, Percent_Identity=39.3162393162393, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24654070, Length=117, Percent_Identity=39.3162393162393, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24654068, Length=117, Percent_Identity=39.3162393162393, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24654072, Length=117, Percent_Identity=39.3162393162393, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24646562, Length=81, Percent_Identity=49.3827160493827, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24646560, Length=81, Percent_Identity=49.3827160493827, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24646558, Length=81, Percent_Identity=49.3827160493827, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24646556, Length=81, Percent_Identity=49.3827160493827, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21357547, Length=81, Percent_Identity=49.3827160493827, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI19920464, Length=69, Percent_Identity=49.2753623188406, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24584630, Length=97, Percent_Identity=43.298969072165, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI17648033, Length=97, Percent_Identity=43.298969072165, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24651436, Length=154, Percent_Identity=31.1688311688312, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24668492, Length=67, Percent_Identity=47.7611940298507, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI21358273, Length=67, Percent_Identity=52.2388059701493, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24762799, Length=116, Percent_Identity=37.9310344827586, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI20129487, Length=70, Percent_Identity=51.4285714285714, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24584014, Length=70, Percent_Identity=51.4285714285714, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=50, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21358311, Length=165, Percent_Identity=30.3030303030303, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21355073, Length=65, Percent_Identity=46.1538461538462, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24651439, Length=77, Percent_Identity=38.961038961039, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21355911, Length=67, Percent_Identity=47.7611940298507, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 32337; Mature: 32205

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQKDYYEALGVAKDASADDIKKAFRKLAVKYHPDRNQGDTAAEEKFKEINEAYAVLSDP
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHEECCCC
DKRKKYDTFGSSDFHQQYSQEDIFRNFDFSGTFKDMGMGGGEDIFSRLFGGAFGRGGGRG
HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCCCC
FGKGPRQGGDLSLTVDVGFRDAATGGERLVAFRRNGQREELKVKIPAGVDNGSRIRIAGK
CCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCEEEEEEC
GSDGENGGPNGDLYLDIRVANDPVFTRDGGDLFVERTIRFSEACLGVSLEVPTLEEPKRI
CCCCCCCCCCCCEEEEEEECCCCEEEECCCCEEEEEHHHHHHHHEEEEEECCCCCCCCEE
KVPAGIQPGTKIRLKGCGIKSLGSNAKGDLYVKISVHVPEGLNSSQKKLVEELARAGL
ECCCCCCCCCEEEEECCCCHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AQKDYYEALGVAKDASADDIKKAFRKLAVKYHPDRNQGDTAAEEKFKEINEAYAVLSDP
CCHHHHHHHCCCCCCCHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHEECCCC
DKRKKYDTFGSSDFHQQYSQEDIFRNFDFSGTFKDMGMGGGEDIFSRLFGGAFGRGGGRG
HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCCCC
FGKGPRQGGDLSLTVDVGFRDAATGGERLVAFRRNGQREELKVKIPAGVDNGSRIRIAGK
CCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCEEEEEEC
GSDGENGGPNGDLYLDIRVANDPVFTRDGGDLFVERTIRFSEACLGVSLEVPTLEEPKRI
CCCCCCCCCCCCEEEEEEECCCCEEEECCCCEEEEEHHHHHHHHEEEEEECCCCCCCCEE
KVPAGIQPGTKIRLKGCGIKSLGSNAKGDLYVKISVHVPEGLNSSQKKLVEELARAGL
ECCCCCCCCCEEEEECCCCHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA