| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is folD [H]
Identifier: 189423579
GI number: 189423579
Start: 482698
End: 483552
Strand: Reverse
Name: folD [H]
Synonym: Glov_0508
Alternate gene names: 189423579
Gene position: 483552-482698 (Counterclockwise)
Preceding gene: 189423580
Following gene: 189423578
Centisome position: 12.34
GC content: 59.77
Gene sequence:
>855_bases ATGGCAGCACAGATTATTGACGGTAAGGCGATTGCGGCAAAGGTTCGTGAACGGATCGGCAGCACGGTTTCAACCCTGAA ACAGCAGGGGATCACCCCCGGTCTGGCAGTGGTGCTGGTGGGTGATGATCCGGCCAGCCGGGTCTATGTCGGCATGAAGA AAAAAATGTGTGTGGAACTGGGGATGTACTCGGCTGACCATGAACTGCCGGCCTCCACCAGCGAGGCAGAGCTGCTGACC CTGATCGGACAGCTGAATGCCGATCCCCGGGTACACGGTATTCTGGTGCAGTTGCCACTGCCTGACCATATCGATACAGA CAAGGTGCTGGAGGCGATCTCGCCGGACAAGGATGCTGACGGCTTCCATCCCTACAACGTGGGGCGCCTGGCCATCGGCA AACCGACCTTCCAGCCCTGCACCCCCTATGGCGTAATGGTGATGCTGGATGAGATCGGCTATGACCTGAAGGGCAAAGAG GTGGTCGTTGTGGGACGCTCCAACATCGTGGGCAAGCCGGTGGCACTGATGTGCCTGTCCCGTCATGCCACCGTCACCAT CTGTCACTCCCGCACCAAGGATCTGGCAGATGTGGTCCGCCGGGCGGATGTGGTCATTGCAGCGGTGGGCAAGGCCGAGA TGGTCAAAGGCGACTGGATCAAGCCGGGGGCCGTGGTGATTGATGTCGGCATCAACCGGGTAGGTGAGAAAAAACTGGTG GGGGATGTGGAGTATGCTGCGGCTGCCGAACGGGCCAGCGCGATCACCCCGGTACCGGGCGGTGTTGGCCCGATGACCAT TGCCATGCTGCTGCAAAATACGCTTGAATCTGCCCAACGGGCTGCAACGAGGTAA
Upstream 100 bases:
>100_bases ATGTTGGGATATTTTAAGACTCGTTCTGATTCCCGTACAAGCTGCCGGCCAACGCAGCCGACAGCTTGTACTGGAATGGG AATCACACTGGAGGGCAGCC
Downstream 100 bases:
>100_bases TCCATGAAAGTCCGCAAGGCGATCTTTCCGGTGGCCGGCCTGGGAACCCGCTTCCTGCCTGCCACCAAATCATCTCCCAA AGAGATGCTACCGCTGATCG
Product: Methenyltetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase [H]
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MAAQIIDGKAIAAKVRERIGSTVSTLKQQGITPGLAVVLVGDDPASRVYVGMKKKMCVELGMYSADHELPASTSEAELLT LIGQLNADPRVHGILVQLPLPDHIDTDKVLEAISPDKDADGFHPYNVGRLAIGKPTFQPCTPYGVMVMLDEIGYDLKGKE VVVVGRSNIVGKPVALMCLSRHATVTICHSRTKDLADVVRRADVVIAAVGKAEMVKGDWIKPGAVVIDVGINRVGEKKLV GDVEYAAAAERASAITPVPGGVGPMTIAMLLQNTLESAQRAATR
Sequences:
>Translated_284_residues MAAQIIDGKAIAAKVRERIGSTVSTLKQQGITPGLAVVLVGDDPASRVYVGMKKKMCVELGMYSADHELPASTSEAELLT LIGQLNADPRVHGILVQLPLPDHIDTDKVLEAISPDKDADGFHPYNVGRLAIGKPTFQPCTPYGVMVMLDEIGYDLKGKE VVVVGRSNIVGKPVALMCLSRHATVTICHSRTKDLADVVRRADVVIAAVGKAEMVKGDWIKPGAVVIDVGINRVGEKKLV GDVEYAAAAERASAITPVPGGVGPMTIAMLLQNTLESAQRAATR >Mature_283_residues AAQIIDGKAIAAKVRERIGSTVSTLKQQGITPGLAVVLVGDDPASRVYVGMKKKMCVELGMYSADHELPASTSEAELLTL IGQLNADPRVHGILVQLPLPDHIDTDKVLEAISPDKDADGFHPYNVGRLAIGKPTFQPCTPYGVMVMLDEIGYDLKGKEV VVVGRSNIVGKPVALMCLSRHATVTICHSRTKDLADVVRRADVVIAAVGKAEMVKGDWIKPGAVVIDVGINRVGEKKLVG DVEYAAAAERASAITPVPGGVGPMTIAMLLQNTLESAQRAATR
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate [H]
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=290, Percent_Identity=48.6206896551724, Blast_Score=270, Evalue=1e-72, Organism=Homo sapiens, GI222418558, Length=294, Percent_Identity=43.8775510204082, Blast_Score=215, Evalue=3e-56, Organism=Homo sapiens, GI94721354, Length=294, Percent_Identity=44.2176870748299, Blast_Score=212, Evalue=4e-55, Organism=Homo sapiens, GI36796743, Length=287, Percent_Identity=28.2229965156794, Blast_Score=96, Evalue=3e-20, Organism=Escherichia coli, GI1786741, Length=279, Percent_Identity=55.5555555555556, Blast_Score=300, Evalue=5e-83, Organism=Caenorhabditis elegans, GI17568735, Length=293, Percent_Identity=44.3686006825939, Blast_Score=225, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6319558, Length=287, Percent_Identity=48.0836236933798, Blast_Score=265, Evalue=8e-72, Organism=Saccharomyces cerevisiae, GI6321643, Length=298, Percent_Identity=45.3020134228188, Blast_Score=258, Evalue=6e-70, Organism=Saccharomyces cerevisiae, GI6322933, Length=315, Percent_Identity=26.6666666666667, Blast_Score=74, Evalue=2e-14, Organism=Drosophila melanogaster, GI24645718, Length=293, Percent_Identity=48.8054607508532, Blast_Score=270, Evalue=6e-73, Organism=Drosophila melanogaster, GI17137370, Length=293, Percent_Identity=48.8054607508532, Blast_Score=270, Evalue=6e-73, Organism=Drosophila melanogaster, GI62472483, Length=293, Percent_Identity=48.8054607508532, Blast_Score=270, Evalue=6e-73, Organism=Drosophila melanogaster, GI45551871, Length=293, Percent_Identity=48.8054607508532, Blast_Score=270, Evalue=6e-73, Organism=Drosophila melanogaster, GI17136818, Length=294, Percent_Identity=47.2789115646259, Blast_Score=251, Evalue=5e-67, Organism=Drosophila melanogaster, GI17136816, Length=294, Percent_Identity=47.2789115646259, Blast_Score=250, Evalue=6e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 [H]
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C [H]
EC number: =1.5.1.5; =3.5.4.9 [H]
Molecular weight: Translated: 30075; Mature: 29944
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: PS00766 THF_DHG_CYH_1 ; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAQIIDGKAIAAKVRERIGSTVSTLKQQGITPGLAVVLVGDDPASRVYVGMKKKMCVEL CCCEEECCHHHHHHHHHHHCHHHHHHHHHCCCCCEEEEEECCCCCCEEEECHHHHHHHHH GMYSADHELPASTSEAELLTLIGQLNADPRVHGILVQLPLPDHIDTDKVLEAISPDKDAD CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCC GFHPYNVGRLAIGKPTFQPCTPYGVMVMLDEIGYDLKGKEVVVVGRSNIVGKPVALMCLS CCCCCCCCEEEECCCCCCCCCCCHHEEEEEHHCCCCCCCEEEEECCCCCCCCCHHHHHHC RHATVTICHSRTKDLADVVRRADVVIAAVGKAEMVKGDWIKPGAVVIDVGINRVGEKKLV CCCEEEEECCCCHHHHHHHHHHCEEEEECCCHHCCCCCCCCCCCEEEEECCCCCCCHHHH GDVEYAAAAERASAITPVPGGVGPMTIAMLLQNTLESAQRAATR CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AAQIIDGKAIAAKVRERIGSTVSTLKQQGITPGLAVVLVGDDPASRVYVGMKKKMCVEL CCEEECCHHHHHHHHHHHCHHHHHHHHHCCCCCEEEEEECCCCCCEEEECHHHHHHHHH GMYSADHELPASTSEAELLTLIGQLNADPRVHGILVQLPLPDHIDTDKVLEAISPDKDAD CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCC GFHPYNVGRLAIGKPTFQPCTPYGVMVMLDEIGYDLKGKEVVVVGRSNIVGKPVALMCLS CCCCCCCCEEEECCCCCCCCCCCHHEEEEEHHCCCCCCCEEEEECCCCCCCCCHHHHHHC RHATVTICHSRTKDLADVVRRADVVIAAVGKAEMVKGDWIKPGAVVIDVGINRVGEKKLV CCCEEEEECCCCHHHHHHHHHHCEEEEECCCHHCCCCCCCCCCCEEEEECCCCCCCHHHH GDVEYAAAAERASAITPVPGGVGPMTIAMLLQNTLESAQRAATR CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA