| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is yeeZ [C]
Identifier: 189423449
GI number: 189423449
Start: 352432
End: 353295
Strand: Reverse
Name: yeeZ [C]
Synonym: Glov_0378
Alternate gene names: 189423449
Gene position: 353295-352432 (Counterclockwise)
Preceding gene: 189423450
Following gene: 189423448
Centisome position: 9.02
GC content: 61.34
Gene sequence:
>864_bases ATGCAGCAACTGTTTATAGCCGGCTGCGGCTACACCGGCAGTCTGGTGGCCAATCTGGCTCTTGCGCAGGGCTGGTCCGT GGCGGTTCACCTGAGGGATCAGGAAAAGGCTGCAGCCTTGACCAGGGCCGGTGCAGAGGTCTGTCTCTGCAGCATGGATG AACGTGATGACATCCCTCGGCTGCCGCTGGACGGACGGATGCTGCTGTACAGTGTCCCTCCTCAGGGAGGCGGCAGCATT GATCTGCGTGCCCGCAATTTCTGCGCCGCCCTGGAGCGGGATCAGACCTTCCCATCCAAAATCGTGTACCTCAGCGCCAC CAGCGTTTACGGTGACACCGGCGGCGCCGTGGTAACCGAACAGAGTCCCACAGAGCCGGCCTCAGCCATGGGCAAACGAC GGCTGGATGCCGAACAACTGTTTCAGGACTTTTGCCTGAAGCACGGTATTCCGGTGGTAATCCTGAGGGTCTCCGCCATC TACGGCAAGGGGCGCCTGCCGTTGATGCAGATCAACCAGGGCCAGCCGCTGCTGCGGGAGGAGCTGGCCAGGCCGTCCAA CCGGATTCACATTGATGATCTGGCCCGGGTCTGCCTGTCTGCCCTGCTCAAAGGGACCGGCATCTACAACGTCAGTGACG GTCATCCGGCCAGCATGACAGCCTACTTCAACGCCTGTGCCGATGCCCTGCAGAAACCCCGTCAGCCCCAGATCGACCTT GAGGAGGCCCGCCGGGTGATGCCGCCGCTCTTGTTCAACTATTTCATGGAATCACGGGTGGTTGACAACCGGCGGATGCT GGAGGATCTGGACATTTCCCTGCGCTATCCCGATCTGCAGCAGGGGATTGCCGCCTCACTCTGA
Upstream 100 bases:
>100_bases TCGGCCTGTGGGGCAAGGGTGCGATCAAGGTCAGGATTGTTGCAATCGAGAAAAAACATCCGCTGGACGAACTGCTTGAT GAAGGAAAGGGATAACAATT
Downstream 100 bases:
>100_bases GCCTTTACAGATCGCAAATCTCTGGTATAGGAGCAGAGTATTGCTCCTTTGGAGAGATGAAACTGATAAAATGAATGGAG GTGTGCCATGAAGAAACTGT
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase Protein; Nucleoside-Diphosphate-Sugar Epimerases; Nucleoside-Diphosphate-Sugar Epimerase Protein; NAD Dependent Epimerase/Dehydratase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family; Epimerase; Actc Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Oxidoreductase; NADP Oxidoreductase Co; NAD Dependent Epimerase/Dehydratase Family Protein; NAD Epimerase/Dehydratase Protein; NAD-Dependent Epimerase; NAD Dependent Epimerase/Dehydratase-Related Protein
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MQQLFIAGCGYTGSLVANLALAQGWSVAVHLRDQEKAAALTRAGAEVCLCSMDERDDIPRLPLDGRMLLYSVPPQGGGSI DLRARNFCAALERDQTFPSKIVYLSATSVYGDTGGAVVTEQSPTEPASAMGKRRLDAEQLFQDFCLKHGIPVVILRVSAI YGKGRLPLMQINQGQPLLREELARPSNRIHIDDLARVCLSALLKGTGIYNVSDGHPASMTAYFNACADALQKPRQPQIDL EEARRVMPPLLFNYFMESRVVDNRRMLEDLDISLRYPDLQQGIAASL
Sequences:
>Translated_287_residues MQQLFIAGCGYTGSLVANLALAQGWSVAVHLRDQEKAAALTRAGAEVCLCSMDERDDIPRLPLDGRMLLYSVPPQGGGSI DLRARNFCAALERDQTFPSKIVYLSATSVYGDTGGAVVTEQSPTEPASAMGKRRLDAEQLFQDFCLKHGIPVVILRVSAI YGKGRLPLMQINQGQPLLREELARPSNRIHIDDLARVCLSALLKGTGIYNVSDGHPASMTAYFNACADALQKPRQPQIDL EEARRVMPPLLFNYFMESRVVDNRRMLEDLDISLRYPDLQQGIAASL >Mature_287_residues MQQLFIAGCGYTGSLVANLALAQGWSVAVHLRDQEKAAALTRAGAEVCLCSMDERDDIPRLPLDGRMLLYSVPPQGGGSI DLRARNFCAALERDQTFPSKIVYLSATSVYGDTGGAVVTEQSPTEPASAMGKRRLDAEQLFQDFCLKHGIPVVILRVSAI YGKGRLPLMQINQGQPLLREELARPSNRIHIDDLARVCLSALLKGTGIYNVSDGHPASMTAYFNACADALQKPRQPQIDL EEARRVMPPLLFNYFMESRVVDNRRMLEDLDISLRYPDLQQGIAASL
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31550; Mature: 31550
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQLFIAGCGYTGSLVANLALAQGWSVAVHLRDQEKAAALTRAGAEVCLCSMDERDDIPR CCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCEEEECCCCCCCCCC LPLDGRMLLYSVPPQGGGSIDLRARNFCAALERDQTFPSKIVYLSATSVYGDTGGAVVTE CCCCCCEEEEECCCCCCCEEEEEHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCEEEEC QSPTEPASAMGKRRLDAEQLFQDFCLKHGIPVVILRVSAIYGKGRLPLMQINQGQPLLRE CCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCEEEECCCCCHHHH ELARPSNRIHIDDLARVCLSALLKGTGIYNVSDGHPASMTAYFNACADALQKPRQPQIDL HHCCCCCCEEHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCH EEARRVMPPLLFNYFMESRVVDNRRMLEDLDISLRYPDLQQGIAASL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHCC >Mature Secondary Structure MQQLFIAGCGYTGSLVANLALAQGWSVAVHLRDQEKAAALTRAGAEVCLCSMDERDDIPR CCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCEEEECCCCCCCCCC LPLDGRMLLYSVPPQGGGSIDLRARNFCAALERDQTFPSKIVYLSATSVYGDTGGAVVTE CCCCCCEEEEECCCCCCCEEEEEHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCEEEEC QSPTEPASAMGKRRLDAEQLFQDFCLKHGIPVVILRVSAIYGKGRLPLMQINQGQPLLRE CCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCEEEECCCCCHHHH ELARPSNRIHIDDLARVCLSALLKGTGIYNVSDGHPASMTAYFNACADALQKPRQPQIDL HHCCCCCCEEHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCH EEARRVMPPLLFNYFMESRVVDNRRMLEDLDISLRYPDLQQGIAASL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA