| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189423422
Identifier: 189423422
GI number: 189423422
Start: 322170
End: 322934
Strand: Reverse
Name: 189423422
Synonym: Glov_0351
Alternate gene names: NA
Gene position: 322934-322170 (Counterclockwise)
Preceding gene: 189423423
Following gene: 189423421
Centisome position: 8.24
GC content: 61.7
Gene sequence:
>765_bases ATGGAACAGCTTGGGCATTTTCTTGCGACGGTCAAAGAGACCGTCAATCCGGTCACACAACCGGTCGGCGTCACCATGGT CAGAGACCTTGCACTGATTGCCGGCAAGAAGATCCGGGTCAAGGGGCAGCGTCTGGCAGTCTGCCAGCAGATCGCCTACA GCCGGATGTACGGCTGGTCCACCTGGGCAGACAAGCAGACCGCCCATTGCGTATTAGGTGCCGGTTGCGTCGGTCTGATC ACGCCGCCGCAACGGGTACTGGATGGCTCGGTCAATAACGGCATCTACCAGCAGGATCAGGCTGCAGCCGCTGCCATGCA GCAGGCCATGCCCCGGCTGGCCCCTGATGTGCAAGGGCTTTTGACCTATCCCCTGGCCCGTCCGGTGGAAGGGATAATCC CTGATCTGGTGGTCGTGTATGTTAATTCAGCCCAGGCCATGCGCTTTGTACAGGCCTTCCTGTTTCACCAGGGGGGCGAG TTTACCATGAAAAGCTCCGGCGATGCCGGGGTCTGCTCCCGGGCCGTGGCCCAGGTGGCGCTGACCGGTGAGCCCACGGT GGAGATCCCCTGCCTGGGTGACCGCCGCTTCGGCATGACTCAGGACCATGAGCTGTGCATTGGCATCCCGTTTAGCTGGC TGGAGCGGACTGCAGAAGGGCTGGCAGCTACCCACAAGGCCGGCATCCGCTACCCGGTGCCGTTCCAGATCCCGTCCGGC TGCGACTTGCCGCCGGATTACATCACTGCTGAAGGCGATTGTTAA
Upstream 100 bases:
>100_bases TCACCCGTGGTGCCGGCAATACCCAGCCGGGATCGCGGCGGGCGCGGGCACGCCAGAAGCAGTAGCCGCAGACGGTCACG CACTCAGGGAGGTCAGGGAC
Downstream 100 bases:
>100_bases TGAGCATGGATCCCCTGTTGCTGCCGTTGTTTGTGGTGAATATCCTGCTGGTACTGGTGGATGCCTCGGTGGGCTACCAC TTGGCACCGCTGCTGTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MEQLGHFLATVKETVNPVTQPVGVTMVRDLALIAGKKIRVKGQRLAVCQQIAYSRMYGWSTWADKQTAHCVLGAGCVGLI TPPQRVLDGSVNNGIYQQDQAAAAAMQQAMPRLAPDVQGLLTYPLARPVEGIIPDLVVVYVNSAQAMRFVQAFLFHQGGE FTMKSSGDAGVCSRAVAQVALTGEPTVEIPCLGDRRFGMTQDHELCIGIPFSWLERTAEGLAATHKAGIRYPVPFQIPSG CDLPPDYITAEGDC
Sequences:
>Translated_254_residues MEQLGHFLATVKETVNPVTQPVGVTMVRDLALIAGKKIRVKGQRLAVCQQIAYSRMYGWSTWADKQTAHCVLGAGCVGLI TPPQRVLDGSVNNGIYQQDQAAAAAMQQAMPRLAPDVQGLLTYPLARPVEGIIPDLVVVYVNSAQAMRFVQAFLFHQGGE FTMKSSGDAGVCSRAVAQVALTGEPTVEIPCLGDRRFGMTQDHELCIGIPFSWLERTAEGLAATHKAGIRYPVPFQIPSG CDLPPDYITAEGDC >Mature_254_residues MEQLGHFLATVKETVNPVTQPVGVTMVRDLALIAGKKIRVKGQRLAVCQQIAYSRMYGWSTWADKQTAHCVLGAGCVGLI TPPQRVLDGSVNNGIYQQDQAAAAAMQQAMPRLAPDVQGLLTYPLARPVEGIIPDLVVVYVNSAQAMRFVQAFLFHQGGE FTMKSSGDAGVCSRAVAQVALTGEPTVEIPCLGDRRFGMTQDHELCIGIPFSWLERTAEGLAATHKAGIRYPVPFQIPSG CDLPPDYITAEGDC
Specific function: Unknown
COG id: COG2043
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003748 [H]
Pfam domain/function: PF02596 DUF169 [H]
EC number: NA
Molecular weight: Translated: 27372; Mature: 27372
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQLGHFLATVKETVNPVTQPVGVTMVRDLALIAGKKIRVKGQRLAVCQQIAYSRMYGWS CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCCC TWADKQTAHCVLGAGCVGLITPPQRVLDGSVNNGIYQQDQAAAAAMQQAMPRLAPDVQGL CCCCCCCCCEEECCCEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHH LTYPLARPVEGIIPDLVVVYVNSAQAMRFVQAFLFHQGGEFTMKSSGDAGVCSRAVAQVA HHHHHHCCHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHE LTGEPTVEIPCLGDRRFGMTQDHELCIGIPFSWLERTAEGLAATHKAGIRYPVPFQIPSG ECCCCCEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC CDLPPDYITAEGDC CCCCCCCEECCCCC >Mature Secondary Structure MEQLGHFLATVKETVNPVTQPVGVTMVRDLALIAGKKIRVKGQRLAVCQQIAYSRMYGWS CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCCC TWADKQTAHCVLGAGCVGLITPPQRVLDGSVNNGIYQQDQAAAAAMQQAMPRLAPDVQGL CCCCCCCCCEEECCCEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHH LTYPLARPVEGIIPDLVVVYVNSAQAMRFVQAFLFHQGGEFTMKSSGDAGVCSRAVAQVA HHHHHHCCHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHE LTGEPTVEIPCLGDRRFGMTQDHELCIGIPFSWLERTAEGLAATHKAGIRYPVPFQIPSG ECCCCCEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC CDLPPDYITAEGDC CCCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]