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The map label for this gene is ykoX [H]

Identifier: 189423410

GI number: 189423410

Start: 310701

End: 311321

Strand: Reverse

Name: ykoX [H]

Synonym: Glov_0339

Alternate gene names: 189423410

Gene position: 311321-310701 (Counterclockwise)

Preceding gene: 189423413

Following gene: 189423409

Centisome position: 7.95

GC content: 57.81

Gene sequence:

>621_bases
ATGATTCACGAACTAATCAGCTGGCTGCTGGAAACCGTCGGCCACTTGGGGTATCCCGGCATTTTTCTGCTGATGGCGAT
GGAAAGCTCCATCATCCCTGTCCCCAGTGAGTTGGTGATGCCGCCGGCAGGCTATTTGATCCACCAGGGGAGGATGGCAT
GGCTGCCGGCAATCCTGGCCGGCACCTTTGGCAGTCTGGCCGGGGCCTACGCCAATTACTATGCCGCCCATTATCTGGGA
CGCCCCCTGATCCTTAAATATGGCCGTTATGTCCTGATCCCGCCGGACAAGTTTGAGCGCGTTGAGTCTTTTTTTCTGCG
CCACGGCGAGATATCCACCTTTATCGGCCGCTTGCTGCCGGTTATCAGGCATCTCATTTCAATTCCTGCCGGCGTAGCCG
GCATGAATCATCTGCGTTTTACCCTCTACACCCTGCTGGGAGCCGGCATCTGGTGCAGCATCCTGACCTGGATCGGCTAC
GCCATCGGCCAGAATCAGGAGCTGGTCATGGCCTGGTCCCACCGTGCCCTGGCCTGGGTCATTCTGGCAAGCTGTGGACT
GGTGGCAGGCTATATCTGGTGGCAGCGCCGCCGGCAGACATTAAACCGTAATAAGCCTTGA

Upstream 100 bases:

>100_bases
AAAATCTGATACTCATGAGCAGATTCCTTTCATGGGGGCGGTTGTATCGCCCAGCTTTTTAAGGTATAAGGAGGGGCATT
TTGCCCGGTAAAGGACTTTC

Downstream 100 bases:

>100_bases
AAGGCAAAGGAATTCAAATGGAAACAACCCGCATCGGACGCATTCACTATCTTGCGCCCAGCTTTGAAACGACAGCACCG
GCAACGATTCAGGGCTTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MIHELISWLLETVGHLGYPGIFLLMAMESSIIPVPSELVMPPAGYLIHQGRMAWLPAILAGTFGSLAGAYANYYAAHYLG
RPLILKYGRYVLIPPDKFERVESFFLRHGEISTFIGRLLPVIRHLISIPAGVAGMNHLRFTLYTLLGAGIWCSILTWIGY
AIGQNQELVMAWSHRALAWVILASCGLVAGYIWWQRRRQTLNRNKP

Sequences:

>Translated_206_residues
MIHELISWLLETVGHLGYPGIFLLMAMESSIIPVPSELVMPPAGYLIHQGRMAWLPAILAGTFGSLAGAYANYYAAHYLG
RPLILKYGRYVLIPPDKFERVESFFLRHGEISTFIGRLLPVIRHLISIPAGVAGMNHLRFTLYTLLGAGIWCSILTWIGY
AIGQNQELVMAWSHRALAWVILASCGLVAGYIWWQRRRQTLNRNKP
>Mature_206_residues
MIHELISWLLETVGHLGYPGIFLLMAMESSIIPVPSELVMPPAGYLIHQGRMAWLPAILAGTFGSLAGAYANYYAAHYLG
RPLILKYGRYVLIPPDKFERVESFFLRHGEISTFIGRLLPVIRHLISIPAGVAGMNHLRFTLYTLLGAGIWCSILTWIGY
AIGQNQELVMAWSHRALAWVILASCGLVAGYIWWQRRRQTLNRNKP

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1789384, Length=149, Percent_Identity=30.2013422818792, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1789481, Length=151, Percent_Identity=26.4900662251656, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23188; Mature: 23188

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHELISWLLETVGHLGYPGIFLLMAMESSIIPVPSELVMPPAGYLIHQGRMAWLPAILA
CHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHCCCCCHHHHCCCHHHHHHHHHH
GTFGSLAGAYANYYAAHYLGRPLILKYGRYVLIPPDKFERVESFFLRHGEISTFIGRLLP
HHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHH
VIRHLISIPAGVAGMNHLRFTLYTLLGAGIWCSILTWIGYAIGQNQELVMAWSHRALAWV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHH
ILASCGLVAGYIWWQRRRQTLNRNKP
HHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIHELISWLLETVGHLGYPGIFLLMAMESSIIPVPSELVMPPAGYLIHQGRMAWLPAILA
CHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHCCCCCHHHHCCCHHHHHHHHHH
GTFGSLAGAYANYYAAHYLGRPLILKYGRYVLIPPDKFERVESFFLRHGEISTFIGRLLP
HHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHH
VIRHLISIPAGVAGMNHLRFTLYTLLGAGIWCSILTWIGYAIGQNQELVMAWSHRALAWV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHH
ILASCGLVAGYIWWQRRRQTLNRNKP
HHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]