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The map label for this gene is cimH [H]

Identifier: 189353884

GI number: 189353884

Start: 2192246

End: 2193610

Strand: Direct

Name: cimH [H]

Synonym: BMULJ_05136

Alternate gene names: 189353884

Gene position: 2192246-2193610 (Clockwise)

Preceding gene: 189353877

Following gene: 189353885

Centisome position: 88.64

GC content: 66.08

Gene sequence:

>1365_bases
TTGCAGACCTCAATCCCTACCCCGTCCCATCCGGAATCGGTCGTCGAAGCCGGTTCGACCGCGCGCACGCGCTTCTGGCC
CGAAGGCTGGTGGAAGCTGATGGAAATCGGCATCGGCATCATTCCGCTGCCGGTCTACCTCATCCTGTTCGCGCTGATCG
TCGGCTTCGCGGTGACGGGCAAGGTGCCCGGCGAAATCTCGATGGCGATCGCGGTGCTCGCGTTCTTCGGCTTCACGTGC
GCGGAACTCGGCAAGCGTCTGCCGCTGCTGCGCAATATCGGCGCGGCCGCGATCTTCGCGACCTTCGTGCCGTCGGCGCT
CACCTACTATCACGTGCTGCCGAAGCCGGTGCTGAACCTGACCGTCGAATTCACGAAGTCGACGAACTTCCTGTACCTGT
TCATCGCATCGATCATCGTCGGCAGCATCCTGAGCATGGATCGCCGCGTGCTGATCCAGGGCTTCCTGAAGATCTTCGTG
CCGCTCGCGCTCGGCTCGGTCGCCGCGGCGATCGTCGGCACGGCCGTCGGCACCGCGCTCGGCCTCGGCGCGCGCCACAC
GCTGCTGTACATCGTCGTGCCGATCATGGCCGGCGGCGTCGGCGAAGGCGCGATCCCGCTGTCGATCGGCTATTCGGAAA
TCCTGCATCTGCCGCAAGGCGAGATGTTCGCGATGGTGCTGCCGTCGGTGATGCTCGGCAGCCTGACCGCGATCATCCTG
TCGGGCGCGCTCGACATGCTCGGCAAGCGCCTGCCGCATCTGACCGGCAACGGCCGCCTGCAGGTCGGCGAAACCGGCGA
CATGACGCCGGAACACGAGGAAAAGCGCGGCCTCGTCGACGTGACGCATATCGCGGGCGCCGGCATCACCGCGATCACGC
TGTACCTCGTCGGGCTGATGGCGCACAAGCTGTTCGGGCTGCCGGCGCCGGTCGCGATGCTGTTCCTCGCGGTGCTCGTG
AAGCTCGCGCGTGCCGTGTCGCCGCCGCTGCAGGAAGGCGCGTTCGTCGTCTACAAGTTCTTCTCGACTGCCGTCACGTA
TCCGCTGCTGTTCGCGATCGGCGTCGCGATGACGCCGTGGGACAAGTTGACCGCCGCGTTCACGCTCGTCAACGTCGTGA
CGATCGTCGCGACCGTCGCGACGCTGATGGGCACCGGTTTCGTGGTCGGCCGCCTGTTGAAGATGTACCCTATCGACACC
GCAATCGTGAACGCCTGCCACAGCGGGCAAGGCGGCACCGGCGACGTCGCGATCCTGACCGCCGCGAACCGGATGCAGCT
GATGCCGTTCGCGCAGATCGCGACGCGCATCGGCGGCGCGATCGTCGTCACGGTCACGCTGATCCTGCTCGCGCACTTCG
GATGA

Upstream 100 bases:

>100_bases
CGCGCGCATCAAGCGACGCAATCCTGGCACGGCGGTTGCGTAATAGAGCGCACACGATGCCGCGCAGCAGCGCCGGCCTG
CCAACATCAGGAGACACGTC

Downstream 100 bases:

>100_bases
CGCACGGCCGCGCGCATCGTCGCGCACGCCGCGCGCGCCGCGTCGCACGCGCCGCCGCCGGGTCGACCGGCGCGCGGCGC
GTGTCGTTGAGGACGGCCGG

Product: putative citrate carrier protein

Products: NA

Alternate protein names: Citrate/malate-proton symporter [H]

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MQTSIPTPSHPESVVEAGSTARTRFWPEGWWKLMEIGIGIIPLPVYLILFALIVGFAVTGKVPGEISMAIAVLAFFGFTC
AELGKRLPLLRNIGAAAIFATFVPSALTYYHVLPKPVLNLTVEFTKSTNFLYLFIASIIVGSILSMDRRVLIQGFLKIFV
PLALGSVAAAIVGTAVGTALGLGARHTLLYIVVPIMAGGVGEGAIPLSIGYSEILHLPQGEMFAMVLPSVMLGSLTAIIL
SGALDMLGKRLPHLTGNGRLQVGETGDMTPEHEEKRGLVDVTHIAGAGITAITLYLVGLMAHKLFGLPAPVAMLFLAVLV
KLARAVSPPLQEGAFVVYKFFSTAVTYPLLFAIGVAMTPWDKLTAAFTLVNVVTIVATVATLMGTGFVVGRLLKMYPIDT
AIVNACHSGQGGTGDVAILTAANRMQLMPFAQIATRIGGAIVVTVTLILLAHFG

Sequences:

>Translated_454_residues
MQTSIPTPSHPESVVEAGSTARTRFWPEGWWKLMEIGIGIIPLPVYLILFALIVGFAVTGKVPGEISMAIAVLAFFGFTC
AELGKRLPLLRNIGAAAIFATFVPSALTYYHVLPKPVLNLTVEFTKSTNFLYLFIASIIVGSILSMDRRVLIQGFLKIFV
PLALGSVAAAIVGTAVGTALGLGARHTLLYIVVPIMAGGVGEGAIPLSIGYSEILHLPQGEMFAMVLPSVMLGSLTAIIL
SGALDMLGKRLPHLTGNGRLQVGETGDMTPEHEEKRGLVDVTHIAGAGITAITLYLVGLMAHKLFGLPAPVAMLFLAVLV
KLARAVSPPLQEGAFVVYKFFSTAVTYPLLFAIGVAMTPWDKLTAAFTLVNVVTIVATVATLMGTGFVVGRLLKMYPIDT
AIVNACHSGQGGTGDVAILTAANRMQLMPFAQIATRIGGAIVVTVTLILLAHFG
>Mature_454_residues
MQTSIPTPSHPESVVEAGSTARTRFWPEGWWKLMEIGIGIIPLPVYLILFALIVGFAVTGKVPGEISMAIAVLAFFGFTC
AELGKRLPLLRNIGAAAIFATFVPSALTYYHVLPKPVLNLTVEFTKSTNFLYLFIASIIVGSILSMDRRVLIQGFLKIFV
PLALGSVAAAIVGTAVGTALGLGARHTLLYIVVPIMAGGVGEGAIPLSIGYSEILHLPQGEMFAMVLPSVMLGSLTAIIL
SGALDMLGKRLPHLTGNGRLQVGETGDMTPEHEEKRGLVDVTHIAGAGITAITLYLVGLMAHKLFGLPAPVAMLFLAVLV
KLARAVSPPLQEGAFVVYKFFSTAVTYPLLFAIGVAMTPWDKLTAAFTLVNVVTIVATVATLMGTGFVVGRLLKMYPIDT
AIVNACHSGQGGTGDVAILTAANRMQLMPFAQIATRIGGAIVVTVTLILLAHFG

Specific function: Proton motive force-driven secondary transporter that catalyzes the uptake of both citrate and malate. Appears to be an electroneutral proton-solute symporter; the number of protons transported is equal to the valence of the transported anions. Is strictl

COG id: COG3493

COG function: function code C; Na+/citrate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:citrate (SCF) symporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004679
- InterPro:   IPR018025 [H]

Pfam domain/function: PF03390 2HCT [H]

EC number: NA

Molecular weight: Translated: 47888; Mature: 47888

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTSIPTPSHPESVVEAGSTARTRFWPEGWWKLMEIGIGIIPLPVYLILFALIVGFAVTG
CCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
KVPGEISMAIAVLAFFGFTCAELGKRLPLLRNIGAAAIFATFVPSALTYYHVLPKPVLNL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHE
TVEFTKSTNFLYLFIASIIVGSILSMDRRVLIQGFLKIFVPLALGSVAAAIVGTAVGTAL
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGARHTLLYIVVPIMAGGVGEGAIPLSIGYSEILHLPQGEMFAMVLPSVMLGSLTAIIL
CCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
SGALDMLGKRLPHLTGNGRLQVGETGDMTPEHEEKRGLVDVTHIAGAGITAITLYLVGLM
HHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHCCCEEEHHHCCCHHHHHHHHHHHHH
AHKLFGLPAPVAMLFLAVLVKLARAVSPPLQEGAFVVYKFFSTAVTYPLLFAIGVAMTPW
HHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCH
DKLTAAFTLVNVVTIVATVATLMGTGFVVGRLLKMYPIDTAIVNACHSGQGGTGDVAILT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEE
AANRMQLMPFAQIATRIGGAIVVTVTLILLAHFG
ECCCHHHCHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQTSIPTPSHPESVVEAGSTARTRFWPEGWWKLMEIGIGIIPLPVYLILFALIVGFAVTG
CCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
KVPGEISMAIAVLAFFGFTCAELGKRLPLLRNIGAAAIFATFVPSALTYYHVLPKPVLNL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHE
TVEFTKSTNFLYLFIASIIVGSILSMDRRVLIQGFLKIFVPLALGSVAAAIVGTAVGTAL
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGARHTLLYIVVPIMAGGVGEGAIPLSIGYSEILHLPQGEMFAMVLPSVMLGSLTAIIL
CCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
SGALDMLGKRLPHLTGNGRLQVGETGDMTPEHEEKRGLVDVTHIAGAGITAITLYLVGLM
HHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHCCCEEEHHHCCCHHHHHHHHHHHHH
AHKLFGLPAPVAMLFLAVLVKLARAVSPPLQEGAFVVYKFFSTAVTYPLLFAIGVAMTPW
HHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCH
DKLTAAFTLVNVVTIVATVATLMGTGFVVGRLLKMYPIDTAIVNACHSGQGGTGDVAILT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEE
AANRMQLMPFAQIATRIGGAIVVTVTLILLAHFG
ECCCHHHCHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377; 11566984 [H]