Definition Burkholderia multivorans ATCC 17616 chromosome 2, complete genome.
Accession NC_010805
Length 2,473,162

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The map label for this gene is ydjE [H]

Identifier: 189353816

GI number: 189353816

Start: 2112752

End: 2114170

Strand: Reverse

Name: ydjE [H]

Synonym: BMULJ_05063

Alternate gene names: 189353816

Gene position: 2114170-2112752 (Counterclockwise)

Preceding gene: 189353818

Following gene: 189353815

Centisome position: 85.48

GC content: 67.44

Gene sequence:

>1419_bases
ATGGCTTCAACGGACAGCATCCCGCAGGCGCCGGCCCGATCCCCGCTGATCGACGCCGGCACGATTTCGGCCCGCCTCGA
CCGGCTGCCGCCGACGCGCAGCGTGTGGAAGCTCGTCGTGCTGCTGAGCCTCGGCTTCTTCTTCGAACTCTACGATCTGC
TGTACAGCGGCTACGTCGCGCCCGGTCTCGTGAAAAGCGGGATCCTCAGCGCGACGACGCACGGGCTGTTCGGCACGACG
GGCGTCGCGAGCTTCATCGCCGCGCTGTTTTCGGGGCTGTTCGTCGGCACGATCGCCTGCGGCTTTCTCGCCGACCGCTT
CGGCCGCCGCGCGATCTTCACGTGGTCGCTGCTGTGGTACACGGCCGCGAACGTCGTGATGGCGTTCCAGGACACCGCGA
CGGGCCTGAATTTCTGGCGCTTCGTCGTCGGTCTCGGCCTCGGCGTCGAGATGGTGACGATCGGCACGTACATCTCCGAG
CTCGTGCCGAAGCAGATTCGCGGCCGCGCGTTCGCGTGCGAGCAGGCGGTCGGTTTCGTCGCGGTGCCGGTGGTCGCGTT
CCTCGCGTATCTGCTCGTGCCGCGTGCGCCGTTCGGCCTCGACGGCTGGCGCTGGGTCGTGCTGATCGGCGCGCACGGCG
CGATCTTCGTCTGGTGGATTCGCCGCGAACTGCCGGAAAGCCCGCGCTGGCTCGCGCAGCAGGGCCGGCTCGACGAAGCC
GATCGCGTGATGCGTGCGCTCGAAGCGAAGGTCGAGGCCGAATACGGGCGGCCGCTGCCGGCGCCCGCCCCGGCGGAGCC
GGTTGCCGAACGCGGCAGCTTCCGCGACATGTGGGTGCCGCCGTATCGTAGCCGCACGATCATGATGACGATCTTCAACG
TGTTCCAGACGGTCGGCTTCTACGGGTTCGCGAACTGGGTGCCGACGCTGCTGATCAAGCAGGGGATCACGATCACCTCG
AGCCTGATGTATTCGAGCGTGATCGCGCTCGCCGCACCGGTCGGCCCGCTGATCGGGCTCGTGATCGCGGACCGCTTCGA
GCGCAAGTCGGTGATCGTCGCGATGGCGGCGACGGTGCTCGTCTGCGGGCTGCTGTTCAGCCAGACGACGATCGGCGCGC
TGCTGATCGTGCTCGGCATCGGCCTGACGCTCGCGAGCAACATCATGTCGTACAGCTTCCATGCGTATCAGGCCGAGCTG
TTCCCGACGTCGATCCGTGCGCGCGCGGTCGGCTTCGTCTACTCGTGGAGCCGCTTCTCGGCGATTTTCTCGTCGTTCGT
GATTGCCGCGGTGCTCAAGGGCTTCGGCACGGTCGGCGTGTTCGCGTTCATTGCGGGCGCGATGGCGATCGTGATGGCCG
CGATCGGCATCATGGGGCCGCGCACGAGGGGCATCGCGCTCGAAGCGATCTCGCGATGA

Upstream 100 bases:

>100_bases
CAAGGCACGTAAGCGCGACACGTGCCGGTACAATGCAGCGATTCGCGCGGCGCCGGACGGCCGCGACAACAACAGACGAC
ACGACAGGAGACGCATCACG

Downstream 100 bases:

>100_bases
GACGGTGCGCGCGGCACGGTCACGCGTTGAAACAACGGTAACGAAACGCAAATTCGCGGCGAAACGGGCGCCGCGTCGCT
GCCGATTTCGCCATGCACGC

Product: putative metabolite:H+ symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MASTDSIPQAPARSPLIDAGTISARLDRLPPTRSVWKLVVLLSLGFFFELYDLLYSGYVAPGLVKSGILSATTHGLFGTT
GVASFIAALFSGLFVGTIACGFLADRFGRRAIFTWSLLWYTAANVVMAFQDTATGLNFWRFVVGLGLGVEMVTIGTYISE
LVPKQIRGRAFACEQAVGFVAVPVVAFLAYLLVPRAPFGLDGWRWVVLIGAHGAIFVWWIRRELPESPRWLAQQGRLDEA
DRVMRALEAKVEAEYGRPLPAPAPAEPVAERGSFRDMWVPPYRSRTIMMTIFNVFQTVGFYGFANWVPTLLIKQGITITS
SLMYSSVIALAAPVGPLIGLVIADRFERKSVIVAMAATVLVCGLLFSQTTIGALLIVLGIGLTLASNIMSYSFHAYQAEL
FPTSIRARAVGFVYSWSRFSAIFSSFVIAAVLKGFGTVGVFAFIAGAMAIVMAAIGIMGPRTRGIALEAISR

Sequences:

>Translated_472_residues
MASTDSIPQAPARSPLIDAGTISARLDRLPPTRSVWKLVVLLSLGFFFELYDLLYSGYVAPGLVKSGILSATTHGLFGTT
GVASFIAALFSGLFVGTIACGFLADRFGRRAIFTWSLLWYTAANVVMAFQDTATGLNFWRFVVGLGLGVEMVTIGTYISE
LVPKQIRGRAFACEQAVGFVAVPVVAFLAYLLVPRAPFGLDGWRWVVLIGAHGAIFVWWIRRELPESPRWLAQQGRLDEA
DRVMRALEAKVEAEYGRPLPAPAPAEPVAERGSFRDMWVPPYRSRTIMMTIFNVFQTVGFYGFANWVPTLLIKQGITITS
SLMYSSVIALAAPVGPLIGLVIADRFERKSVIVAMAATVLVCGLLFSQTTIGALLIVLGIGLTLASNIMSYSFHAYQAEL
FPTSIRARAVGFVYSWSRFSAIFSSFVIAAVLKGFGTVGVFAFIAGAMAIVMAAIGIMGPRTRGIALEAISR
>Mature_471_residues
ASTDSIPQAPARSPLIDAGTISARLDRLPPTRSVWKLVVLLSLGFFFELYDLLYSGYVAPGLVKSGILSATTHGLFGTTG
VASFIAALFSGLFVGTIACGFLADRFGRRAIFTWSLLWYTAANVVMAFQDTATGLNFWRFVVGLGLGVEMVTIGTYISEL
VPKQIRGRAFACEQAVGFVAVPVVAFLAYLLVPRAPFGLDGWRWVVLIGAHGAIFVWWIRRELPESPRWLAQQGRLDEAD
RVMRALEAKVEAEYGRPLPAPAPAEPVAERGSFRDMWVPPYRSRTIMMTIFNVFQTVGFYGFANWVPTLLIKQGITITSS
LMYSSVIALAAPVGPLIGLVIADRFERKSVIVAMAATVLVCGLLFSQTTIGALLIVLGIGLTLASNIMSYSFHAYQAELF
PTSIRARAVGFVYSWSRFSAIFSSFVIAAVLKGFGTVGVFAFIAGAMAIVMAAIGIMGPRTRGIALEAISR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Homo sapiens, GI166064021, Length=389, Percent_Identity=25.9640102827763, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI4506999, Length=398, Percent_Identity=24.8743718592965, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI302148518, Length=359, Percent_Identity=26.7409470752089, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI24308167, Length=501, Percent_Identity=21.9560878243513, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI203098995, Length=309, Percent_Identity=26.2135922330097, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI166197673, Length=358, Percent_Identity=28.7709497206704, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI4507005, Length=408, Percent_Identity=25.4901960784314, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI23510410, Length=334, Percent_Identity=26.0479041916168, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI24497490, Length=414, Percent_Identity=25.1207729468599, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI216548223, Length=337, Percent_Identity=23.7388724035608, Blast_Score=66, Evalue=8e-11,
Organism=Homo sapiens, GI213021148, Length=423, Percent_Identity=23.8770685579196, Blast_Score=66, Evalue=9e-11,
Organism=Escherichia coli, GI1788068, Length=465, Percent_Identity=28.6021505376344, Blast_Score=172, Evalue=6e-44,
Organism=Escherichia coli, GI1788074, Length=463, Percent_Identity=29.1576673866091, Blast_Score=162, Evalue=6e-41,
Organism=Escherichia coli, GI87082159, Length=423, Percent_Identity=27.4231678486998, Blast_Score=116, Evalue=3e-27,
Organism=Escherichia coli, GI1786229, Length=441, Percent_Identity=24.4897959183673, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI87082404, Length=430, Percent_Identity=23.953488372093, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1789207, Length=411, Percent_Identity=24.0875912408759, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI87082231, Length=206, Percent_Identity=29.6116504854369, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1789312, Length=325, Percent_Identity=24.3076923076923, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1790463, Length=436, Percent_Identity=21.7889908256881, Blast_Score=68, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25145172, Length=406, Percent_Identity=25.615763546798, Blast_Score=75, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6319718, Length=324, Percent_Identity=25.3086419753086, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6323653, Length=481, Percent_Identity=22.4532224532225, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6320705, Length=469, Percent_Identity=22.1748400852878, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI19922616, Length=396, Percent_Identity=24.7474747474747, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24640198, Length=417, Percent_Identity=23.021582733813, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24640196, Length=417, Percent_Identity=23.021582733813, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24640200, Length=417, Percent_Identity=23.021582733813, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21355657, Length=361, Percent_Identity=24.9307479224377, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24652793, Length=435, Percent_Identity=21.8390804597701, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24652795, Length=394, Percent_Identity=21.8274111675127, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR005828 [H]

Pfam domain/function: PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 51130; Mature: 50999

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTDSIPQAPARSPLIDAGTISARLDRLPPTRSVWKLVVLLSLGFFFELYDLLYSGYVA
CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PGLVKSGILSATTHGLFGTTGVASFIAALFSGLFVGTIACGFLADRFGRRAIFTWSLLWY
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
TAANVVMAFQDTATGLNFWRFVVGLGLGVEMVTIGTYISELVPKQIRGRAFACEQAVGFV
HHHHHHEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AVPVVAFLAYLLVPRAPFGLDGWRWVVLIGAHGAIFVWWIRRELPESPRWLAQQGRLDEA
HHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEHHHHHHCCCCCHHHHHCCCCCHH
DRVMRALEAKVEAEYGRPLPAPAPAEPVAERGSFRDMWVPPYRSRTIMMTIFNVFQTVGF
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
YGFANWVPTLLIKQGITITSSLMYSSVIALAAPVGPLIGLVIADRFERKSVIVAMAATVL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VCGLLFSQTTIGALLIVLGIGLTLASNIMSYSFHAYQAELFPTSIRARAVGFVYSWSRFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
AIFSSFVIAAVLKGFGTVGVFAFIAGAMAIVMAAIGIMGPRTRGIALEAISR
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCC
>Mature Secondary Structure 
ASTDSIPQAPARSPLIDAGTISARLDRLPPTRSVWKLVVLLSLGFFFELYDLLYSGYVA
CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PGLVKSGILSATTHGLFGTTGVASFIAALFSGLFVGTIACGFLADRFGRRAIFTWSLLWY
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
TAANVVMAFQDTATGLNFWRFVVGLGLGVEMVTIGTYISELVPKQIRGRAFACEQAVGFV
HHHHHHEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AVPVVAFLAYLLVPRAPFGLDGWRWVVLIGAHGAIFVWWIRRELPESPRWLAQQGRLDEA
HHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEHHHHHHCCCCCHHHHHCCCCCHH
DRVMRALEAKVEAEYGRPLPAPAPAEPVAERGSFRDMWVPPYRSRTIMMTIFNVFQTVGF
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
YGFANWVPTLLIKQGITITSSLMYSSVIALAAPVGPLIGLVIADRFERKSVIVAMAATVL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VCGLLFSQTTIGALLIVLGIGLTLASNIMSYSFHAYQAELFPTSIRARAVGFVYSWSRFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
AIFSSFVIAAVLKGFGTVGVFAFIAGAMAIVMAAIGIMGPRTRGIALEAISR
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 8011666; 9384377 [H]