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The map label for this gene is ycjR [C]

Identifier: 189353709

GI number: 189353709

Start: 1972805

End: 1973698

Strand: Reverse

Name: ycjR [C]

Synonym: BMULJ_04954

Alternate gene names: 189353709

Gene position: 1973698-1972805 (Counterclockwise)

Preceding gene: 189353710

Following gene: 189353708

Centisome position: 79.8

GC content: 66.0

Gene sequence:

>894_bases
ATGAACAAGCTTGGCGTACATGCACTGGTCTGGGAAGCCGGCTGGAGCCGCGACGAATGCGCGCGCGCAATCGCGCGCAC
GGCCGAAACCGGCTTCGACTTCATCGAGGTGCCGGCGCTCGATCCGGCGTCCATCGACGCCGAATTCACGCGACGCGAAC
TCGAGCGGCACGGACTCGGCGTCACGTTTTCGCTCGGGCTCGACGCGCAGACGGACATCTCGAGCGGCGACCCGGCGCGC
GCGGCGCGCGGCAAGGCGAAGCTGGACGACGTGCTGCGCGTTGCACGCGACTGCGGCGCCACGCACGTGTGCGGGATCCT
GTATTCCGCGTTCCAGAAGAACGCGGTGCCGACGACGCGCGCCGGCGTCGCAATGGCTGCCGACATCCTCGGGCAGGTCG
CCGACACGGCCGCGCAATACGGGATCACGCTCGGGCTCGAGGTCGTGAACCGATACGAATCGAACGTGCTCAATACGGCG
TCGCAGGGCGTCGAGCTCTGCGAGCGCATCGGCCGGCCGAACGTCAAGGTGCATCTCGACACCTATCACATGAACATCGA
GGAGTCGGACATCATGTCGGCGATCCGCGATACCGGCGATCGCCTCGGCTATTTCCACATCGGCGATTCGCATCGCGGCT
ATCTCGGCTCGGGCAACGTCGACTTCACGGCCGTGTTTCGCGCGCTGGTGTTCAGCTGCTATACGGGGCCGATCACGTTC
GAGAGCTTTTCGTCGCGCGTCGTCGGCCAGCCGCTCGAAGGCATTCTCGCGATCTGGCGCAATCTTTGGGAGGACAGCAG
CGATCTCGCGTCGCATGCGCTGGCGTACACGCGCGTGCAGCTGAAGTCGGCGCAGGAGGCGTTGAAGCAGGCCGAGCGGA
GCCGTTTGCCGTGA

Upstream 100 bases:

>100_bases
CCGCTGGGCATGGGCGTACGGCGTTGACGCGTCCGTTCGCCGATTACGCGCGGGATTCCGCGCACGGCGGCCCGGCACAC
CTTCGACGAAAGGAGAATGA

Downstream 100 bases:

>100_bases
GCGATGCGATCGCCGCCGCGCAGCCCGTCGCGTTCGCCGCGTTGGTCGATCATCTGCACCGGACGCAGCGTGCGACGCGG
CGCGTCGTCGCGATTGCGGG

Product: sugar phosphate isomerase/epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MNKLGVHALVWEAGWSRDECARAIARTAETGFDFIEVPALDPASIDAEFTRRELERHGLGVTFSLGLDAQTDISSGDPAR
AARGKAKLDDVLRVARDCGATHVCGILYSAFQKNAVPTTRAGVAMAADILGQVADTAAQYGITLGLEVVNRYESNVLNTA
SQGVELCERIGRPNVKVHLDTYHMNIEESDIMSAIRDTGDRLGYFHIGDSHRGYLGSGNVDFTAVFRALVFSCYTGPITF
ESFSSRVVGQPLEGILAIWRNLWEDSSDLASHALAYTRVQLKSAQEALKQAERSRLP

Sequences:

>Translated_297_residues
MNKLGVHALVWEAGWSRDECARAIARTAETGFDFIEVPALDPASIDAEFTRRELERHGLGVTFSLGLDAQTDISSGDPAR
AARGKAKLDDVLRVARDCGATHVCGILYSAFQKNAVPTTRAGVAMAADILGQVADTAAQYGITLGLEVVNRYESNVLNTA
SQGVELCERIGRPNVKVHLDTYHMNIEESDIMSAIRDTGDRLGYFHIGDSHRGYLGSGNVDFTAVFRALVFSCYTGPITF
ESFSSRVVGQPLEGILAIWRNLWEDSSDLASHALAYTRVQLKSAQEALKQAERSRLP
>Mature_297_residues
MNKLGVHALVWEAGWSRDECARAIARTAETGFDFIEVPALDPASIDAEFTRRELERHGLGVTFSLGLDAQTDISSGDPAR
AARGKAKLDDVLRVARDCGATHVCGILYSAFQKNAVPTTRAGVAMAADILGQVADTAAQYGITLGLEVVNRYESNVLNTA
SQGVELCERIGRPNVKVHLDTYHMNIEESDIMSAIRDTGDRLGYFHIGDSHRGYLGSGNVDFTAVFRALVFSCYTGPITF
ESFSSRVVGQPLEGILAIWRNLWEDSSDLASHALAYTRVQLKSAQEALKQAERSRLP

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hyi family [H]

Homologues:

Organism=Escherichia coli, GI87081874, Length=117, Percent_Identity=36.7521367521368, Blast_Score=81, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 32364; Mature: 32364

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLGVHALVWEAGWSRDECARAIARTAETGFDFIEVPALDPASIDAEFTRRELERHGLG
CCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCCC
VTFSLGLDAQTDISSGDPARAARGKAKLDDVLRVARDCGATHVCGILYSAFQKNAVPTTR
EEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHH
AGVAMAADILGQVADTAAQYGITLGLEVVNRYESNVLNTASQGVELCERIGRPNVKVHLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
TYHMNIEESDIMSAIRDTGDRLGYFHIGDSHRGYLGSGNVDFTAVFRALVFSCYTGPITF
EEEECCCHHHHHHHHHHCHHHCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEH
ESFSSRVVGQPLEGILAIWRNLWEDSSDLASHALAYTRVQLKSAQEALKQAERSRLP
HHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKLGVHALVWEAGWSRDECARAIARTAETGFDFIEVPALDPASIDAEFTRRELERHGLG
CCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCCC
VTFSLGLDAQTDISSGDPARAARGKAKLDDVLRVARDCGATHVCGILYSAFQKNAVPTTR
EEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHH
AGVAMAADILGQVADTAAQYGITLGLEVVNRYESNVLNTASQGVELCERIGRPNVKVHLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
TYHMNIEESDIMSAIRDTGDRLGYFHIGDSHRGYLGSGNVDFTAVFRALVFSCYTGPITF
EEEECCCHHHHHHHHHHCHHHCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEH
ESFSSRVVGQPLEGILAIWRNLWEDSSDLASHALAYTRVQLKSAQEALKQAERSRLP
HHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA