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The map label for this gene is ybiX [C]

Identifier: 189353697

GI number: 189353697

Start: 1957895

End: 1958578

Strand: Reverse

Name: ybiX [C]

Synonym: BMULJ_04942

Alternate gene names: 189353697

Gene position: 1958578-1957895 (Counterclockwise)

Preceding gene: 189353698

Following gene: 189353696

Centisome position: 79.19

GC content: 67.54

Gene sequence:

>684_bases
ATGCTTGTACACATTCCGAACGTGCTGACGCCCGAGCAGGTGCGCATGATCCGCGACCGGCTCGATCAGGCGGGCGACGC
CTGGGTCGACGGCCGCGCGACGGCCGGCTACACGGGCGCGCCGGTCAAGCGCAACCAGCAGATCGCCGAGCATTCGCCGA
TCGCGCGCGAGCTCGGCGACGTGATCCTGGCGGCGATCGAGCGCCATCCGCTCTTCATCAGCGCGGCGCTGCCGAATCAG
GTCTATCCGCCGCTGTTCAACCGTTACGAAGGCGGGATGACGTTCGGCAGCCACGTCGACGGCGCGGTGCGCGTGCTGCC
GAACGGCGTCAAGCTGCGCACCGACGTGTCGGTCACGCTGTTCCTGTCCGCGCCCGACGAATACGACGGCGGCGAACTCG
TGATCGAGGATGCGTACGGCGTGCAGCAGGTGAAGCTGCCGGCCGGCGACATGATCGTCTATCCGGCGACGAGCCTGCAT
CAGGTCACGCCGGTCACGCGCGGCGTGCGCGTCGCGAGTTTCTTCTGGGTGCAGAGCCTCGTGCGCAGCGATGCGCAGCG
CGCGCTGCTGTTCGACATGGATACGGCGATCCAGCGGCTCAATGCCGGCGGCGCCGATCCGCAGGCATGCCGCAGCCTCG
TCGGCTGCTACCACAACCTTTTGCGAATCTGGAGCGAGATGTGA

Upstream 100 bases:

>100_bases
CGCGGTGCCGGGCATCGGGCGCACGTTCCTCGCGACGCTCGACTACCGGTTCTGAGCGGCGCGTGCGGCCGGCGTGCCAA
TCGACGAAACAGGTGAAACG

Downstream 100 bases:

>100_bases
GCGTGATCGATTCCGTCGAAATTGCAGCGACGCCCGTGTCGCGGACGGCGCCCGGCGCGCGGACCGGCAGCGCGCGCTCG
CGTCGCGGCACATTCCTGCA

Product: putative hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MLVHIPNVLTPEQVRMIRDRLDQAGDAWVDGRATAGYTGAPVKRNQQIAEHSPIARELGDVILAAIERHPLFISAALPNQ
VYPPLFNRYEGGMTFGSHVDGAVRVLPNGVKLRTDVSVTLFLSAPDEYDGGELVIEDAYGVQQVKLPAGDMIVYPATSLH
QVTPVTRGVRVASFFWVQSLVRSDAQRALLFDMDTAIQRLNAGGADPQACRSLVGCYHNLLRIWSEM

Sequences:

>Translated_227_residues
MLVHIPNVLTPEQVRMIRDRLDQAGDAWVDGRATAGYTGAPVKRNQQIAEHSPIARELGDVILAAIERHPLFISAALPNQ
VYPPLFNRYEGGMTFGSHVDGAVRVLPNGVKLRTDVSVTLFLSAPDEYDGGELVIEDAYGVQQVKLPAGDMIVYPATSLH
QVTPVTRGVRVASFFWVQSLVRSDAQRALLFDMDTAIQRLNAGGADPQACRSLVGCYHNLLRIWSEM
>Mature_227_residues
MLVHIPNVLTPEQVRMIRDRLDQAGDAWVDGRATAGYTGAPVKRNQQIAEHSPIARELGDVILAAIERHPLFISAALPNQ
VYPPLFNRYEGGMTFGSHVDGAVRVLPNGVKLRTDVSVTLFLSAPDEYDGGELVIEDAYGVQQVKLPAGDMIVYPATSLH
QVTPVTRGVRVASFFWVQSLVRSDAQRALLFDMDTAIQRLNAGGADPQACRSLVGCYHNLLRIWSEM

Specific function: Unknown

COG id: COG3128

COG function: function code S; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe2OG dioxygenase domain [H]

Homologues:

Organism=Escherichia coli, GI87081784, Length=227, Percent_Identity=53.3039647577093, Blast_Score=256, Evalue=1e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005123
- InterPro:   IPR006620 [H]

Pfam domain/function: PF03171 2OG-FeII_Oxy [H]

EC number: 1.14.11.- [C]

Molecular weight: Translated: 24934; Mature: 24934

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVHIPNVLTPEQVRMIRDRLDQAGDAWVDGRATAGYTGAPVKRNQQIAEHSPIARELGD
CEEECCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCHHHHCCHHHHHHHH
VILAAIERHPLFISAALPNQVYPPLFNRYEGGMTFGSHVDGAVRVLPNGVKLRTDVSVTL
HHHHHHHCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCEEEECCCCEEEEECCEEEE
FLSAPDEYDGGELVIEDAYGVQQVKLPAGDMIVYPATSLHQVTPVTRGVRVASFFWVQSL
EEECCCCCCCCEEEEECCCCCEEEECCCCCEEEECCCCCHHHCHHHHHHHHHHHHHHHHH
VRSDAQRALLFDMDTAIQRLNAGGADPQACRSLVGCYHNLLRIWSEM
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLVHIPNVLTPEQVRMIRDRLDQAGDAWVDGRATAGYTGAPVKRNQQIAEHSPIARELGD
CEEECCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCHHHHCCHHHHHHHH
VILAAIERHPLFISAALPNQVYPPLFNRYEGGMTFGSHVDGAVRVLPNGVKLRTDVSVTL
HHHHHHHCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCEEEECCCCEEEEECCEEEE
FLSAPDEYDGGELVIEDAYGVQQVKLPAGDMIVYPATSLHQVTPVTRGVRVASFFWVQSL
EEECCCCCCCCEEEEECCCCCEEEECCCCCEEEECCCCCHHHCHHHHHHHHHHHHHHHHH
VRSDAQRALLFDMDTAIQRLNAGGADPQACRSLVGCYHNLLRIWSEM
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA