Click here to switch to the map view.

The map label for this gene is oruR [H]

Identifier: 189353618

GI number: 189353618

Start: 1877068

End: 1878105

Strand: Direct

Name: oruR [H]

Synonym: BMULJ_04862

Alternate gene names: 189353618

Gene position: 1877068-1878105 (Clockwise)

Preceding gene: 189353611

Following gene: 189353619

Centisome position: 75.9

GC content: 69.36

Gene sequence:

>1038_bases
ATGAAGCAGGAAGACAAGGGAACCGTCGCGATCGGTCTCGTCGCGTACAGCGTCGCGCTGGCCGTGCGCCGCGGCGTGGC
GGCCGCGCCGCTGCTCGCGCAGGCCGGCATCGCGCCCGCGCTGCTCGAGCAGCCGCGCGCGCGCGTGTCCGCGCAGCAGT
ACGGCGCGCTGTGGAACGCGATCGCGCGTGCGCTCGACGACGAATTCTTCGGGCAGGACAGCCATCCGATGCGCAGCGGC
AGCTTCGTCGCGATGAGCCAGGCCGCGCTGTCGGCGGCCGACGGGCTGCACGCGATGGCGCGAGCGGTGAACTTCATGCA
TTGCGTGCTCGACGATCTGCACGCGGAACTCGACGCGAACCCGCAGCGCGTGCGGCTGCGTTTCGTGCATCGCAACAGCG
GCGCGACGCCCGCGATGTTCACGTACGCGACCTATTTCATCATCGTGTACGGGCTGACCTGCTGGCTGATCGGCCGGCGC
ATCCCGCTGCTGCACGCAAGCTTCCGCTGCGATACGCCGCCCGCCGATCACGAATATCCGTCGATGTTCTGCGACGACAT
GCGCTTCAACCAGCCCGATTCGTATGTGGATTTCGATCCGGAATTCGCGACGCTGCCGGTCGTGCAGAACGCGAAAACGC
TGAAGACGTTCCTGCGCAACGCGCCGGCCAGTTTCATCGTCAAGTACCGCAACCCGAACGCGCTCGCGCCGCGCGTGCGC
GCGGTGCTGCGCGGGATGCCGCCCGCCGCGTGGCCGGGCGCGGCGGGAATGGCCGCGCGGCTGTACGTCGCCGAAGCGAC
GCTGCGGCGCAAGCTGCATCAGGAAGGTCACGCGTATCAGTCGATCAAGGACACGCTGCGGCGCGATCTCGCGTTCGAAG
CGCTCGCCGATCCGACGCGCACGATCGCGGACGTCGCGGCGGCCGCGGGCTTCGCGGAGCCGAGCGCGTTCTATCGCGCG
TTCCGCAAATGGAGCGGGCGCAGTCCGGCCGAATACCGCGACGAAGTGCTCGCGCGGGCGGGCAACGCGCGGCCCTGA

Upstream 100 bases:

>100_bases
TCGTTCTGTTTCGATGCAATCAGTGTAGGCAAGCGTGCGCATCTGTTCGATGCTCGCGCCGCTCATTTACACTGAGCGTT
TTTGCCATACCGGCACCGGG

Downstream 100 bases:

>100_bases
GTCGCGCGGCGACCGTCTTCCCGCTCTGCGCCGAAACCGCCTAATCTTTAAGCGTCGGGCCCAGCCCATTCCGCGAACCG
GACGGCATGCGGCCGCGCGC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MKQEDKGTVAIGLVAYSVALAVRRGVAAAPLLAQAGIAPALLEQPRARVSAQQYGALWNAIARALDDEFFGQDSHPMRSG
SFVAMSQAALSAADGLHAMARAVNFMHCVLDDLHAELDANPQRVRLRFVHRNSGATPAMFTYATYFIIVYGLTCWLIGRR
IPLLHASFRCDTPPADHEYPSMFCDDMRFNQPDSYVDFDPEFATLPVVQNAKTLKTFLRNAPASFIVKYRNPNALAPRVR
AVLRGMPPAAWPGAAGMAARLYVAEATLRRKLHQEGHAYQSIKDTLRRDLAFEALADPTRTIADVAAAAGFAEPSAFYRA
FRKWSGRSPAEYRDEVLARAGNARP

Sequences:

>Translated_345_residues
MKQEDKGTVAIGLVAYSVALAVRRGVAAAPLLAQAGIAPALLEQPRARVSAQQYGALWNAIARALDDEFFGQDSHPMRSG
SFVAMSQAALSAADGLHAMARAVNFMHCVLDDLHAELDANPQRVRLRFVHRNSGATPAMFTYATYFIIVYGLTCWLIGRR
IPLLHASFRCDTPPADHEYPSMFCDDMRFNQPDSYVDFDPEFATLPVVQNAKTLKTFLRNAPASFIVKYRNPNALAPRVR
AVLRGMPPAAWPGAAGMAARLYVAEATLRRKLHQEGHAYQSIKDTLRRDLAFEALADPTRTIADVAAAAGFAEPSAFYRA
FRKWSGRSPAEYRDEVLARAGNARP
>Mature_345_residues
MKQEDKGTVAIGLVAYSVALAVRRGVAAAPLLAQAGIAPALLEQPRARVSAQQYGALWNAIARALDDEFFGQDSHPMRSG
SFVAMSQAALSAADGLHAMARAVNFMHCVLDDLHAELDANPQRVRLRFVHRNSGATPAMFTYATYFIIVYGLTCWLIGRR
IPLLHASFRCDTPPADHEYPSMFCDDMRFNQPDSYVDFDPEFATLPVVQNAKTLKTFLRNAPASFIVKYRNPNALAPRVR
AVLRGMPPAAWPGAAGMAARLYVAEATLRRKLHQEGHAYQSIKDTLRRDLAFEALADPTRTIADVAAAAGFAEPSAFYRA
FRKWSGRSPAEYRDEVLARAGNARP

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37937; Mature: 37937

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQEDKGTVAIGLVAYSVALAVRRGVAAAPLLAQAGIAPALLEQPRARVSAQQYGALWNA
CCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHH
IARALDDEFFGQDSHPMRSGSFVAMSQAALSAADGLHAMARAVNFMHCVLDDLHAELDAN
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PQRVRLRFVHRNSGATPAMFTYATYFIIVYGLTCWLIGRRIPLLHASFRCDTPPADHEYP
HHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCCCCCCCH
SMFCDDMRFNQPDSYVDFDPEFATLPVVQNAKTLKTFLRNAPASFIVKYRNPNALAPRVR
HHHHHCCCCCCCCCCCCCCCCCEECCHHCCHHHHHHHHHCCCHHEEEEECCCCCHHHHHH
AVLRGMPPAAWPGAAGMAARLYVAEATLRRKLHQEGHAYQSIKDTLRRDLAFEALADPTR
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHH
TIADVAAAAGFAEPSAFYRAFRKWSGRSPAEYRDEVLARAGNARP
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKQEDKGTVAIGLVAYSVALAVRRGVAAAPLLAQAGIAPALLEQPRARVSAQQYGALWNA
CCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHH
IARALDDEFFGQDSHPMRSGSFVAMSQAALSAADGLHAMARAVNFMHCVLDDLHAELDAN
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PQRVRLRFVHRNSGATPAMFTYATYFIIVYGLTCWLIGRRIPLLHASFRCDTPPADHEYP
HHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCCCCCCCH
SMFCDDMRFNQPDSYVDFDPEFATLPVVQNAKTLKTFLRNAPASFIVKYRNPNALAPRVR
HHHHHCCCCCCCCCCCCCCCCCEECCHHCCHHHHHHHHHCCCHHEEEEECCCCCHHHHHH
AVLRGMPPAAWPGAAGMAARLYVAEATLRRKLHQEGHAYQSIKDTLRRDLAFEALADPTR
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHH
TIADVAAAAGFAEPSAFYRAFRKWSGRSPAEYRDEVLARAGNARP
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]