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The map label for this gene is yecD [C]

Identifier: 189353605

GI number: 189353605

Start: 1861535

End: 1862173

Strand: Direct

Name: yecD [C]

Synonym: BMULJ_04849

Alternate gene names: 189353605

Gene position: 1861535-1862173 (Clockwise)

Preceding gene: 189353604

Following gene: 189353608

Centisome position: 75.27

GC content: 67.14

Gene sequence:

>639_bases
GTGACGCATCCGGGAAACGCATCCGATACCGTACCCGCCACCGGCAACGCCTCCGGGCAGCACGAAGCATCGCCGCTGCC
GGCCATCACGCCCGCGCGCACCGCGCTGCTCGTCATGCATTACCAGACCGACATCCTCCGGCTCTTTCCGTCGGTCGCGC
CGACCCTGCTCGCCAACACGCGCGCGCTATGCGACGCGGCCCGCGCCAGCGGCGTCGCGGTCTATTTCGCGAACCTGCGA
TTCAGCCCGGGCTACCCGGAAGTGAGCCCGCTGAACAAGAACGGGCAAGGCATCAAGCAACTGGGCCTGTTCATCGACGA
CGCGCCGTCGCCGGAACTCGCGCGGCGCGACGACGAGCCGCTGATCGTCGCGCATCGCGCCAGCGTCTTCTTCGGCACCG
ATCTGCAGGCGCGTCTGGCGGCACAACACATCGACACGCTGATCATGGTCGGCATCGCGTCGACCGGCGTCGTGCTGTCG
TCGGTCGCCTATGCGAGCGACGCGGACTTCCGCCTGTACACGGTCAAGGACTGCTGCTACGACCCGGATCCGGTGGTTCA
CGAACACCTGTTCGCCACCGCGTTCGAAACGCGCACGACGGTGCTGTCGCTCGACGATGCGTTGCGCATGCTCGCATAG

Upstream 100 bases:

>100_bases
GCGTAGGATGCACGACACGCCGTGCGCCTACGCTGGACGGTCGATACACTTTGCCGGTACAAATAGCGCTATCCGAATCC
GCAGCCCTGGGAGATCCTCC

Downstream 100 bases:

>100_bases
CGTCGCGATCGTCACGACATCGCCGTCACCGCGCGATAACGCGGCATCAGCCAGGCGGTCAAGGTCCGGGCCTTCGACGC
CCCTGCGCCGATTCGCACGG

Product: YcaC-related amidohydrolase

Products: NA

Alternate protein names: Isochorismatase; Pyrimidine Utilization Protein B; Isochorismatase Family Protein; Isochorismatase-Family Hydrolase; Isochorismatase Hydrolase Family Protein; Amidase; Hydrolase Protein; Amidase Related Nicotinamidase; Isochorismatase Family; Isochorismatase Family Hydrolase; N-Carbamoylsarcosine Amidase; Hydrolase; Isochorismate Hydrolase

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MTHPGNASDTVPATGNASGQHEASPLPAITPARTALLVMHYQTDILRLFPSVAPTLLANTRALCDAARASGVAVYFANLR
FSPGYPEVSPLNKNGQGIKQLGLFIDDAPSPELARRDDEPLIVAHRASVFFGTDLQARLAAQHIDTLIMVGIASTGVVLS
SVAYASDADFRLYTVKDCCYDPDPVVHEHLFATAFETRTTVLSLDDALRMLA

Sequences:

>Translated_212_residues
MTHPGNASDTVPATGNASGQHEASPLPAITPARTALLVMHYQTDILRLFPSVAPTLLANTRALCDAARASGVAVYFANLR
FSPGYPEVSPLNKNGQGIKQLGLFIDDAPSPELARRDDEPLIVAHRASVFFGTDLQARLAAQHIDTLIMVGIASTGVVLS
SVAYASDADFRLYTVKDCCYDPDPVVHEHLFATAFETRTTVLSLDDALRMLA
>Mature_211_residues
THPGNASDTVPATGNASGQHEASPLPAITPARTALLVMHYQTDILRLFPSVAPTLLANTRALCDAARASGVAVYFANLRF
SPGYPEVSPLNKNGQGIKQLGLFIDDAPSPELARRDDEPLIVAHRASVFFGTDLQARLAAQHIDTLIMVGIASTGVVLSS
VAYASDADFRLYTVKDCCYDPDPVVHEHLFATAFETRTTVLSLDDALRMLA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22705; Mature: 22574

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHPGNASDTVPATGNASGQHEASPLPAITPARTALLVMHYQTDILRLFPSVAPTLLANT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
RALCDAARASGVAVYFANLRFSPGYPEVSPLNKNGQGIKQLGLFIDDAPSPELARRDDEP
HHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHCEEECCCCCCHHHCCCCCC
LIVAHRASVFFGTDLQARLAAQHIDTLIMVGIASTGVVLSSVAYASDADFRLYTVKDCCY
EEEEEECEEEECCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
DPDPVVHEHLFATAFETRTTVLSLDDALRMLA
CCCHHHHHHHHHHHHHHHHEEEEHHHHHHHCC
>Mature Secondary Structure 
THPGNASDTVPATGNASGQHEASPLPAITPARTALLVMHYQTDILRLFPSVAPTLLANT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
RALCDAARASGVAVYFANLRFSPGYPEVSPLNKNGQGIKQLGLFIDDAPSPELARRDDEP
HHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHCEEECCCCCCHHHCCCCCC
LIVAHRASVFFGTDLQARLAAQHIDTLIMVGIASTGVVLSSVAYASDADFRLYTVKDCCY
EEEEEECEEEECCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
DPDPVVHEHLFATAFETRTTVLSLDDALRMLA
CCCHHHHHHHHHHHHHHHHEEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA