Click here to switch to the map view.

The map label for this gene is atoE [H]

Identifier: 189353511

GI number: 189353511

Start: 1733542

End: 1734870

Strand: Direct

Name: atoE [H]

Synonym: BMULJ_04755

Alternate gene names: 189353511

Gene position: 1733542-1734870 (Clockwise)

Preceding gene: 189353510

Following gene: 189353512

Centisome position: 70.09

GC content: 64.18

Gene sequence:

>1329_bases
ATGCAGAGATTGACCGCCTTCTTCACCGAGCTGATGCGCCGGTACTTGCCCGATCCGTTCGTCTTCGCGATCGGCCTCAC
GCTGCTGACGATGGTGCTGGCCGTGGTCGTGCAAGGCCAGGCCGTGACCGCACTTGCGTCGAGCTGGGGCAAAGGTTTCT
GGACGCTGCTCGCCTTCACGACGCAGATGGCCGTGATTCTCGCCATGGGCTACGTGCTCGCCACCGCGCCGCTCGTCGAC
CGCTTTCTCGACCGCATCGTCTCGCACGTGAATTCGCCGCGCATGGCCATCGTCGTCGCGACGCTGGTCGGCGGCATCGG
CAGTTGGCTGAACTGGGGATTCGGACTCGTAGTGGGCGGCATCGTCGCGCGCAAGCTCGCGCTGCGCGTGCGGGGCGTGC
ACCATCCGCTCATCATCGCGTCGGCATACAGCGGCTTCACGCTCTATGGCCTCGGCCTTTCCGCAAGCATTCCCGTGCTG
ATCTCAACGAAGGGCCATCCGCTCGAAGCGCAGATGGGCGTCATTCCGCTGTCCGAAACGATTTTCTCGCCCGCGATGCT
GATGACGAGCCTCGTGACGATCGTCACGCTGCCGCTGCTGAACGCGTGGCTGCATCCGAAGGCAGGCCAGCCGGTGAAGG
AAATCGACCGCACGCGCGAAGCCGCACCCACGGCCGCCGCGCCCGCGCTCGACCTCGACGATGGCGACACGCTCGCCAAC
CGGCTGAACCACAGCCGCGTGCTGAGCTACGTGATCGGCGCGATCGGCATGGGCTACGTCGCACTGCACTTCGTGCAGGG
CGGCTCGATCGATCTGAACCTCATCAACTTCTTCATCCTGTTCCTCGGCATCCTGCTGCTCGGCACGCCGATCCGCTATG
TCGAGAAGCTCAACGAGGGCATCCGCACGATCGGCGGCATCATCCTGCAGTATCCGTTCTACGCGGGCATCATGGCGATC
ATGGCGTCGTCGGGGCTCGTCGAGACGCTGTCCGCCGCATTCGTCAAGATCGCGACGCCCGACACGCTGCCGTTCTGGGG
GCTGGTCAGCTCGTTCGTGATCAACTTCTTCGCGCCCTCGGCCGGCGGCCATTGGGTCATCCAGGGGCCGTTCATGATCG
AAGCGGCCAAGACGATCGGCGCGTCCGTCGGCCATACCTCCACGGCCGTCATGCTCGGCAACGCATGGAACGATCTCGTG
CAGCCGTTCTGGATCCTGCCGGCGCTCGCGCTGTCGAAGCTCAAGCTCAAGGACATCATGGGTTATACGGTCATCATGAT
GTTCTGGGTCGGCATCGTCTATTCGGTGGCGATCCTCGCATGGCGCTGA

Upstream 100 bases:

>100_bases
GCTCGCGCGGCATCGCAGGCTCGCCGCACCCGACGACGACTGATCGCCCGGACGCCACCGGGGAATCGCAGAACAATCAC
GACACAACGGAGACAAAACC

Downstream 100 bases:

>100_bases
GCCTTGCGCATCACGTCGCGCCGCGCGCGCCCCGACAAATCATCGAACGAGGTAGCCAATGCCGTTTCTGATCGAAACTT
TCGACAAGCCCGATCATGCC

Product: short-chain fatty acids transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MQRLTAFFTELMRRYLPDPFVFAIGLTLLTMVLAVVVQGQAVTALASSWGKGFWTLLAFTTQMAVILAMGYVLATAPLVD
RFLDRIVSHVNSPRMAIVVATLVGGIGSWLNWGFGLVVGGIVARKLALRVRGVHHPLIIASAYSGFTLYGLGLSASIPVL
ISTKGHPLEAQMGVIPLSETIFSPAMLMTSLVTIVTLPLLNAWLHPKAGQPVKEIDRTREAAPTAAAPALDLDDGDTLAN
RLNHSRVLSYVIGAIGMGYVALHFVQGGSIDLNLINFFILFLGILLLGTPIRYVEKLNEGIRTIGGIILQYPFYAGIMAI
MASSGLVETLSAAFVKIATPDTLPFWGLVSSFVINFFAPSAGGHWVIQGPFMIEAAKTIGASVGHTSTAVMLGNAWNDLV
QPFWILPALALSKLKLKDIMGYTVIMMFWVGIVYSVAILAWR

Sequences:

>Translated_442_residues
MQRLTAFFTELMRRYLPDPFVFAIGLTLLTMVLAVVVQGQAVTALASSWGKGFWTLLAFTTQMAVILAMGYVLATAPLVD
RFLDRIVSHVNSPRMAIVVATLVGGIGSWLNWGFGLVVGGIVARKLALRVRGVHHPLIIASAYSGFTLYGLGLSASIPVL
ISTKGHPLEAQMGVIPLSETIFSPAMLMTSLVTIVTLPLLNAWLHPKAGQPVKEIDRTREAAPTAAAPALDLDDGDTLAN
RLNHSRVLSYVIGAIGMGYVALHFVQGGSIDLNLINFFILFLGILLLGTPIRYVEKLNEGIRTIGGIILQYPFYAGIMAI
MASSGLVETLSAAFVKIATPDTLPFWGLVSSFVINFFAPSAGGHWVIQGPFMIEAAKTIGASVGHTSTAVMLGNAWNDLV
QPFWILPALALSKLKLKDIMGYTVIMMFWVGIVYSVAILAWR
>Mature_442_residues
MQRLTAFFTELMRRYLPDPFVFAIGLTLLTMVLAVVVQGQAVTALASSWGKGFWTLLAFTTQMAVILAMGYVLATAPLVD
RFLDRIVSHVNSPRMAIVVATLVGGIGSWLNWGFGLVVGGIVARKLALRVRGVHHPLIIASAYSGFTLYGLGLSASIPVL
ISTKGHPLEAQMGVIPLSETIFSPAMLMTSLVTIVTLPLLNAWLHPKAGQPVKEIDRTREAAPTAAAPALDLDDGDTLAN
RLNHSRVLSYVIGAIGMGYVALHFVQGGSIDLNLINFFILFLGILLLGTPIRYVEKLNEGIRTIGGIILQYPFYAGIMAI
MASSGLVETLSAAFVKIATPDTLPFWGLVSSFVINFFAPSAGGHWVIQGPFMIEAAKTIGASVGHTSTAVMLGNAWNDLV
QPFWILPALALSKLKLKDIMGYTVIMMFWVGIVYSVAILAWR

Specific function: Responsible for the intake of short-chain fatty acids [H]

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=445, Percent_Identity=38.876404494382, Blast_Score=331, Evalue=5e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006161
- InterPro:   IPR006160 [H]

Pfam domain/function: PF02667 SCFA_trans [H]

EC number: NA

Molecular weight: Translated: 47610; Mature: 47610

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRLTAFFTELMRRYLPDPFVFAIGLTLLTMVLAVVVQGQAVTALASSWGKGFWTLLAFT
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHH
TQMAVILAMGYVLATAPLVDRFLDRIVSHVNSPRMAIVVATLVGGIGSWLNWGFGLVVGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVARKLALRVRGVHHPLIIASAYSGFTLYGLGLSASIPVLISTKGHPLEAQMGVIPLSET
HHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCEECHHH
IFSPAMLMTSLVTIVTLPLLNAWLHPKAGQPVKEIDRTREAAPTAAAPALDLDDGDTLAN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
RLNHSRVLSYVIGAIGMGYVALHFVQGGSIDLNLINFFILFLGILLLGTPIRYVEKLNEG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IRTIGGIILQYPFYAGIMAIMASSGLVETLSAAFVKIATPDTLPFWGLVSSFVINFFAPS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCC
AGGHWVIQGPFMIEAAKTIGASVGHTSTAVMLGNAWNDLVQPFWILPALALSKLKLKDIM
CCCCEEEECCHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
GYTVIMMFWVGIVYSVAILAWR
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQRLTAFFTELMRRYLPDPFVFAIGLTLLTMVLAVVVQGQAVTALASSWGKGFWTLLAFT
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHH
TQMAVILAMGYVLATAPLVDRFLDRIVSHVNSPRMAIVVATLVGGIGSWLNWGFGLVVGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVARKLALRVRGVHHPLIIASAYSGFTLYGLGLSASIPVLISTKGHPLEAQMGVIPLSET
HHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCEECHHH
IFSPAMLMTSLVTIVTLPLLNAWLHPKAGQPVKEIDRTREAAPTAAAPALDLDDGDTLAN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
RLNHSRVLSYVIGAIGMGYVALHFVQGGSIDLNLINFFILFLGILLLGTPIRYVEKLNEG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IRTIGGIILQYPFYAGIMAIMASSGLVETLSAAFVKIATPDTLPFWGLVSSFVINFFAPS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCC
AGGHWVIQGPFMIEAAKTIGASVGHTSTAVMLGNAWNDLVQPFWILPALALSKLKLKDIM
CCCCEEEECCHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
GYTVIMMFWVGIVYSVAILAWR
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]