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The map label for this gene is rbsC [H]

Identifier: 189353489

GI number: 189353489

Start: 1706888

End: 1707901

Strand: Reverse

Name: rbsC [H]

Synonym: BMULJ_04733

Alternate gene names: 189353489

Gene position: 1707901-1706888 (Counterclockwise)

Preceding gene: 189353490

Following gene: 189353488

Centisome position: 69.06

GC content: 68.05

Gene sequence:

>1014_bases
ATGAACCTGCCTGATTCCTCTTCTTCCACGCCTTCGACGACGCTCGCCGGCACGGCGGCCGACGCGCTGCCGCCGCCGCG
CGCGAAGTGGGCACAGCTGCGGCGCTCGACGCTGTTCTATCCGCTCGTCGGCCTCGTGGTCGTCTGCATCGCGATGATGA
TCGCGAGCCCGAGCTTCCTGTCCGCCGCGAACCTCGAGAACGTGCTGCGCCAGGTGTCGATCAACGCGATCATCGCGGTC
GGGATGACCTGCGTGATCCTGACGGGCGGAATCGATCTGTCGGTCGGCTCGGTCATGGCGCTGTCGGGCACGCTCGCGGC
CGGGCTGATGGTCGCGGGGGTGAACGCGGTCGCCGCGCTCGCGATCGGGATCGCGATCGGCTTCGGTTTCGGCTTTCTGA
ACGGCGTGTTCGTCGCCTTCGCGGGCATGCCGCCGATCATCGTCACGCTCGCGACGATGGGCATCGCGCGCGGCCTCGCG
CTGATCTATACGGGCGGCTATCCGATCGACGGGCTGCCCGACTGGGTCGCGTTCTTCGGCAGCGGCAAGGTGTTCGGCAT
CCAGGCCCCCGTGCTGATCATGCTCGTCGTCTATGCGATCGCGTGGCTGCTGCTCGAGCGCATGCCGTTCGGGCGCTACG
TGTACGCGATCGGCGGCAACGAGCAGGCGACGCGGCTCACCGGCGTGCGCGTCGCGCGCGTGAAGCTGATCGTCTACACG
CTGGCCGGCGTCACGTCCGCGCTCGCGGCGATCGTGCTGACCGGGCGGCTGATGAGCGGACAACCGAACGCGGGCGTCGG
CTTCGAGCTCGATGCGATCGCCGCGGTCGTGATGGGCGGCACGTCGATCTCCGGCGGACGCGGCGCGATCCTCGGCACGC
TCGTCGGCGCGCTGCTGCTCGGCGTGCTGAACAACGGGCTCAACATGATCGGCGTGAACCCTTACGTGCAGAACGTGATC
AAGGGCGGAATCATCCTGCTCGCGATCTACATCAGCCGCGAACGTTCGCGGTGA

Upstream 100 bases:

>100_bases
GTGTTCCGGCAGGGCCGCATCGAGGCGACGCTCGAAGGCGACGAGATCGATCCCGACACGGTCATGACCTATGCCACGGC
CGGCACGCGAGGAGCGACCC

Downstream 100 bases:

>100_bases
CGCGGCCGCCTCGCCGGCCCTCCAACCTTTCTCCTTGACCGAAACGAGACAACTCATGACGACACCCGAAGCCCAGCCGC
GGATGACCGCGGTCGTCTGC

Product: simple sugar transport system permease protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MNLPDSSSSTPSTTLAGTAADALPPPRAKWAQLRRSTLFYPLVGLVVVCIAMMIASPSFLSAANLENVLRQVSINAIIAV
GMTCVILTGGIDLSVGSVMALSGTLAAGLMVAGVNAVAALAIGIAIGFGFGFLNGVFVAFAGMPPIIVTLATMGIARGLA
LIYTGGYPIDGLPDWVAFFGSGKVFGIQAPVLIMLVVYAIAWLLLERMPFGRYVYAIGGNEQATRLTGVRVARVKLIVYT
LAGVTSALAAIVLTGRLMSGQPNAGVGFELDAIAAVVMGGTSISGGRGAILGTLVGALLLGVLNNGLNMIGVNPYVQNVI
KGGIILLAIYISRERSR

Sequences:

>Translated_337_residues
MNLPDSSSSTPSTTLAGTAADALPPPRAKWAQLRRSTLFYPLVGLVVVCIAMMIASPSFLSAANLENVLRQVSINAIIAV
GMTCVILTGGIDLSVGSVMALSGTLAAGLMVAGVNAVAALAIGIAIGFGFGFLNGVFVAFAGMPPIIVTLATMGIARGLA
LIYTGGYPIDGLPDWVAFFGSGKVFGIQAPVLIMLVVYAIAWLLLERMPFGRYVYAIGGNEQATRLTGVRVARVKLIVYT
LAGVTSALAAIVLTGRLMSGQPNAGVGFELDAIAAVVMGGTSISGGRGAILGTLVGALLLGVLNNGLNMIGVNPYVQNVI
KGGIILLAIYISRERSR
>Mature_337_residues
MNLPDSSSSTPSTTLAGTAADALPPPRAKWAQLRRSTLFYPLVGLVVVCIAMMIASPSFLSAANLENVLRQVSINAIIAV
GMTCVILTGGIDLSVGSVMALSGTLAAGLMVAGVNAVAALAIGIAIGFGFGFLNGVFVAFAGMPPIIVTLATMGIARGLA
LIYTGGYPIDGLPDWVAFFGSGKVFGIQAPVLIMLVVYAIAWLLLERMPFGRYVYAIGGNEQATRLTGVRVARVKLIVYT
LAGVTSALAAIVLTGRLMSGQPNAGVGFELDAIAAVVMGGTSISGGRGAILGTLVGALLLGVLNNGLNMIGVNPYVQNVI
KGGIILLAIYISRERSR

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=311, Percent_Identity=47.2668810289389, Blast_Score=253, Evalue=9e-69,
Organism=Escherichia coli, GI1790524, Length=294, Percent_Identity=39.7959183673469, Blast_Score=189, Evalue=2e-49,
Organism=Escherichia coli, GI145693152, Length=317, Percent_Identity=36.9085173501577, Blast_Score=174, Evalue=9e-45,
Organism=Escherichia coli, GI1788896, Length=320, Percent_Identity=35.9375, Blast_Score=172, Evalue=4e-44,
Organism=Escherichia coli, GI1789992, Length=351, Percent_Identity=33.6182336182336, Blast_Score=154, Evalue=8e-39,
Organism=Escherichia coli, GI87082395, Length=287, Percent_Identity=37.6306620209059, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI1788471, Length=320, Percent_Identity=37.1875, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1787793, Length=281, Percent_Identity=35.9430604982206, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI145693214, Length=271, Percent_Identity=35.4243542435424, Blast_Score=128, Evalue=6e-31,
Organism=Escherichia coli, GI1787794, Length=270, Percent_Identity=31.8518518518519, Blast_Score=114, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34540; Mature: 34540

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLPDSSSSTPSTTLAGTAADALPPPRAKWAQLRRSTLFYPLVGLVVVCIAMMIASPSFL
CCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
SAANLENVLRQVSINAIIAVGMTCVILTGGIDLSVGSVMALSGTLAAGLMVAGVNAVAAL
HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AIGIAIGFGFGFLNGVFVAFAGMPPIIVTLATMGIARGLALIYTGGYPIDGLPDWVAFFG
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHC
SGKVFGIQAPVLIMLVVYAIAWLLLERMPFGRYVYAIGGNEQATRLTGVRVARVKLIVYT
CCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
LAGVTSALAAIVLTGRLMSGQPNAGVGFELDAIAAVVMGGTSISGGRGAILGTLVGALLL
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
GVLNNGLNMIGVNPYVQNVIKGGIILLAIYISRERSR
HHHHCCCCEEECCHHHHHHHCCCCEEEEEEHHHCCCC
>Mature Secondary Structure
MNLPDSSSSTPSTTLAGTAADALPPPRAKWAQLRRSTLFYPLVGLVVVCIAMMIASPSFL
CCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
SAANLENVLRQVSINAIIAVGMTCVILTGGIDLSVGSVMALSGTLAAGLMVAGVNAVAAL
HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AIGIAIGFGFGFLNGVFVAFAGMPPIIVTLATMGIARGLALIYTGGYPIDGLPDWVAFFG
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHC
SGKVFGIQAPVLIMLVVYAIAWLLLERMPFGRYVYAIGGNEQATRLTGVRVARVKLIVYT
CCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
LAGVTSALAAIVLTGRLMSGQPNAGVGFELDAIAAVVMGGTSISGGRGAILGTLVGALLL
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
GVLNNGLNMIGVNPYVQNVIKGGIILLAIYISRERSR
HHHHCCCCEEECCHHHHHHHCCCCEEEEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]