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The map label for this gene is bfrD [H]

Identifier: 189353479

GI number: 189353479

Start: 1697287

End: 1699533

Strand: Direct

Name: bfrD [H]

Synonym: BMULJ_04723

Alternate gene names: 189353479

Gene position: 1697287-1699533 (Clockwise)

Preceding gene: 189353476

Following gene: 189353480

Centisome position: 68.63

GC content: 66.13

Gene sequence:

>2247_bases
ATGAAGTCCCGTTCCGACGAGTCGAAGCTCGGAAAATTCACCACCCTGTGCAGCGTGCTCGCCGCCGGTCCCGCATTCGC
CGCCGACGGCGCCCCGCCGCCCGCGCCGGCAGACGCGGAAGGCCATCTCGCGCCGATCGAGATCAAGGGCCGCGCTGAGC
ACAGCTACAAGGCCGATTTTTCCGCGTCGGCCAAATTCACCGCGCCGCTCGTCGACACGCCGAAATCGGTCACCGTGATT
CCGCAGGAGCTGATCCAGACGAGCGGCGCCTCGACGCTGACCGAAGCGCTGCGCACCGTGCCCGGCATCACGTTCGGCGC
CGGCGAAGGCGGCAACCCGCTCGGCGACCGCCCGTTCATCCGCGGCTACGACACGCAGGGCAGCATGTTCGTCGACGGCA
TGCGCGACACCGGCGCGACCACGCGCGAAATCTTCAACACCGAACGCGTCGAGATCACGAAAGGCTCGGACGGCGCGTAC
GGCGGCCGCGGCGGCGCGGGCGGCAGCATCAACCTGATCACGAAGGCGCCGCACCTCGGCACGACGGCCGCCGCGAGCGC
CGGGCTCGGCACCGATCGCTACCGTCGCTTCACCGCCGACGGCAACTGGCAGTTCGCCGATCATGCGGCGTTCCGGCTGA
ACCTGATGAGCCACAACAACGACGTGGCGGGCCGCGACGCCGTGAACAACGAACGCTGGGGCGTCGCGCCGTCGATCGCG
TTCGGCCTCGGCACGCCGACACGCGTGACCGCGAGCTACTACCATCTGTCGACGGACGACCTGCCCGACGGCGGCATTCC
GTACTTCTACACGACGACGAACAAGCCCGCGAACGTCGACACGATCTATCCGGCGCCCGTCGACCGCCACAACTTCTACG
GCCTGATCGACCGCGACTTCCGCAAGACGACGTCGGACATCAGCACGCTGCGCATCGAGCACGACATCACGCCGGCGCTG
ACCGTGCGCAACACGACGCGCTACACCGAATCGACGCAGGACTACATCTGGACGCAGCCCGACGACAGTCAGGGCAACGT
GATCAACGGCAAGGTCTGGCGCCGCAACAACAACCGCAACAGTTCGATCAACAGCATCGCGAACCAGACCGAGCTGTTCG
GCGAATTCCGCACCGGTCCGTTCAAGCACAGCTTCACGACCGGCATCGAGCTGTCGCGCGAATGGGGCAAGCGCGACACG
TACACGGTCGCGACCGGCACCGGCGCGATCTGCAACAACGGCATCGGCGCGCCGTCCGGCTACAACTGCACGAGCCTGTG
GTCGCCGAACCCGGCCGATCCGTGGGCCGGTTCGATCTCGCGCAACAACGACTATGCGCATGCGCGCACGACGACGAAGT
CGATCTACGGCTTCGACACGATCGAGCTGACGCCGCGCTGGCAGCTCAATGCCGGCGTGCGCGTCGACGATTACTCGACG
CGCTTCACCGATACCAAGGCGAACGGCGGCAAGACCTACACGCGCGACGACACGCTGTTCAACTGGCAGCTCGGCGCGGT
GTTCAAGCCCGCGCAGAACGGCAGCATCTATGCGTCGTACGCGACGTCGTCGACGCCGGCCGGGATGCTGCTCGGCGAAG
GCAGCGAGACGCAGTCGCTGACGCCGGGCCGCGGCGGCGTCGGCTCGAACGCCGACCAGCTGTCGCCCGAGAAGAACCGC
AGCATCGAGGTCGGCACGAAATGGAACGTGCTGAACGACAAGCTGTCGCTGACGGCCGCGCTGTTCCAGATCGATACGAC
GAACGCGCGCGTGACGCTGCCGAACAATCAGTACGCGATGGTCGGCAACAAGCGCGTGCAGGGCCTCGAGCTCGGCGTCG
CGGGCCAGCTCACGAAACAGTGGCAGGTGTTCGGCGGCTACACGTACATGAAGAGCGAACTGCGCGACAACGGCAAGGAC
ACCGCGAACAACGGCCATCGCTTCCCGAATACGCCGAAGCACAGCTTCACGATGTGGACGAACTACGACGTCACGCCGAA
GTTCACGGTCGGCGGCGGCGCGTTCTACATGTCGGAAGTGTTCGGCGATCCGGCGAACCTGCGCGCGGTGCCGTCGTACT
GGCGCTTCGATGCGATGGCGCAGTACCGCATCAACAAGAAGCTCGACCTGCAGCTGAACGTGAACAACCTGTTCAACCGC
ACGTACTTCGATCAGGCGTATCCGGCGCACTACGCGTCGATCGCGCCGGGCCGCTCCGCGTTCGTCACGCTGAACGCGCG
CTACTGA

Upstream 100 bases:

>100_bases
CATAGAATGCGCGCTGAAAAGAAATCGTAATAATTCCCGGCGGCATGCACCATCGTGCAGCACTTCGCCGCCGGGCCACA
CAGCGAGGTCGAAGCGCATC

Downstream 100 bases:

>100_bases
TCGATGGAAGCCGTATCGCTGAAGGCGCTCGCGTCGGTCTCGCCGCGCGAGTTCGCCGAGATTCTGGCCGGCCCGCCCGA
GCGCGCGGCCGCGTGGGTCG

Product: iron complex outer membrane receptor protein

Products: NA

Alternate protein names: Virulence-associated outer membrane protein Vir-90 [H]

Number of amino acids: Translated: 748; Mature: 748

Protein sequence:

>748_residues
MKSRSDESKLGKFTTLCSVLAAGPAFAADGAPPPAPADAEGHLAPIEIKGRAEHSYKADFSASAKFTAPLVDTPKSVTVI
PQELIQTSGASTLTEALRTVPGITFGAGEGGNPLGDRPFIRGYDTQGSMFVDGMRDTGATTREIFNTERVEITKGSDGAY
GGRGGAGGSINLITKAPHLGTTAAASAGLGTDRYRRFTADGNWQFADHAAFRLNLMSHNNDVAGRDAVNNERWGVAPSIA
FGLGTPTRVTASYYHLSTDDLPDGGIPYFYTTTNKPANVDTIYPAPVDRHNFYGLIDRDFRKTTSDISTLRIEHDITPAL
TVRNTTRYTESTQDYIWTQPDDSQGNVINGKVWRRNNNRNSSINSIANQTELFGEFRTGPFKHSFTTGIELSREWGKRDT
YTVATGTGAICNNGIGAPSGYNCTSLWSPNPADPWAGSISRNNDYAHARTTTKSIYGFDTIELTPRWQLNAGVRVDDYST
RFTDTKANGGKTYTRDDTLFNWQLGAVFKPAQNGSIYASYATSSTPAGMLLGEGSETQSLTPGRGGVGSNADQLSPEKNR
SIEVGTKWNVLNDKLSLTAALFQIDTTNARVTLPNNQYAMVGNKRVQGLELGVAGQLTKQWQVFGGYTYMKSELRDNGKD
TANNGHRFPNTPKHSFTMWTNYDVTPKFTVGGGAFYMSEVFGDPANLRAVPSYWRFDAMAQYRINKKLDLQLNVNNLFNR
TYFDQAYPAHYASIAPGRSAFVTLNARY

Sequences:

>Translated_748_residues
MKSRSDESKLGKFTTLCSVLAAGPAFAADGAPPPAPADAEGHLAPIEIKGRAEHSYKADFSASAKFTAPLVDTPKSVTVI
PQELIQTSGASTLTEALRTVPGITFGAGEGGNPLGDRPFIRGYDTQGSMFVDGMRDTGATTREIFNTERVEITKGSDGAY
GGRGGAGGSINLITKAPHLGTTAAASAGLGTDRYRRFTADGNWQFADHAAFRLNLMSHNNDVAGRDAVNNERWGVAPSIA
FGLGTPTRVTASYYHLSTDDLPDGGIPYFYTTTNKPANVDTIYPAPVDRHNFYGLIDRDFRKTTSDISTLRIEHDITPAL
TVRNTTRYTESTQDYIWTQPDDSQGNVINGKVWRRNNNRNSSINSIANQTELFGEFRTGPFKHSFTTGIELSREWGKRDT
YTVATGTGAICNNGIGAPSGYNCTSLWSPNPADPWAGSISRNNDYAHARTTTKSIYGFDTIELTPRWQLNAGVRVDDYST
RFTDTKANGGKTYTRDDTLFNWQLGAVFKPAQNGSIYASYATSSTPAGMLLGEGSETQSLTPGRGGVGSNADQLSPEKNR
SIEVGTKWNVLNDKLSLTAALFQIDTTNARVTLPNNQYAMVGNKRVQGLELGVAGQLTKQWQVFGGYTYMKSELRDNGKD
TANNGHRFPNTPKHSFTMWTNYDVTPKFTVGGGAFYMSEVFGDPANLRAVPSYWRFDAMAQYRINKKLDLQLNVNNLFNR
TYFDQAYPAHYASIAPGRSAFVTLNARY
>Mature_748_residues
MKSRSDESKLGKFTTLCSVLAAGPAFAADGAPPPAPADAEGHLAPIEIKGRAEHSYKADFSASAKFTAPLVDTPKSVTVI
PQELIQTSGASTLTEALRTVPGITFGAGEGGNPLGDRPFIRGYDTQGSMFVDGMRDTGATTREIFNTERVEITKGSDGAY
GGRGGAGGSINLITKAPHLGTTAAASAGLGTDRYRRFTADGNWQFADHAAFRLNLMSHNNDVAGRDAVNNERWGVAPSIA
FGLGTPTRVTASYYHLSTDDLPDGGIPYFYTTTNKPANVDTIYPAPVDRHNFYGLIDRDFRKTTSDISTLRIEHDITPAL
TVRNTTRYTESTQDYIWTQPDDSQGNVINGKVWRRNNNRNSSINSIANQTELFGEFRTGPFKHSFTTGIELSREWGKRDT
YTVATGTGAICNNGIGAPSGYNCTSLWSPNPADPWAGSISRNNDYAHARTTTKSIYGFDTIELTPRWQLNAGVRVDDYST
RFTDTKANGGKTYTRDDTLFNWQLGAVFKPAQNGSIYASYATSSTPAGMLLGEGSETQSLTPGRGGVGSNADQLSPEKNR
SIEVGTKWNVLNDKLSLTAALFQIDTTNARVTLPNNQYAMVGNKRVQGLELGVAGQLTKQWQVFGGYTYMKSELRDNGKD
TANNGHRFPNTPKHSFTMWTNYDVTPKFTVGGGAFYMSEVFGDPANLRAVPSYWRFDAMAQYRINKKLDLQLNVNNLFNR
TYFDQAYPAHYASIAPGRSAFVTLNARY

Specific function: Probably involved in iron transport [H]

COG id: COG4774

COG function: function code P; Outer membrane receptor for monomeric catechols

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787024, Length=748, Percent_Identity=36.8983957219251, Blast_Score=426, Evalue=1e-120,
Organism=Escherichia coli, GI1786344, Length=812, Percent_Identity=22.0443349753695, Blast_Score=116, Evalue=6e-27,
Organism=Escherichia coli, GI1787344, Length=749, Percent_Identity=24.1655540720961, Blast_Score=110, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 81558; Mature: 81558

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRSDESKLGKFTTLCSVLAAGPAFAADGAPPPAPADAEGHLAPIEIKGRAEHSYKADF
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
SASAKFTAPLVDTPKSVTVIPQELIQTSGASTLTEALRTVPGITFGAGEGGNPLGDRPFI
CCCCEEEECCCCCCCCEEECCHHHHHCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCEE
RGYDTQGSMFVDGMRDTGATTREIFNTERVEITKGSDGAYGGRGGAGGSINLITKAPHLG
EEECCCCCEEECCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCC
TTAAASAGLGTDRYRRFTADGNWQFADHAAFRLNLMSHNNDVAGRDAVNNERWGVAPSIA
CHHHHHCCCCHHHHEEEECCCCEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEE
FGLGTPTRVTASYYHLSTDDLPDGGIPYFYTTTNKPANVDTIYPAPVDRHNFYGLIDRDF
ECCCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCCCEEEEECCHH
RKTTSDISTLRIEHDITPALTVRNTTRYTESTQDYIWTQPDDSQGNVINGKVWRRNNNRN
HHHHCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCEEECEEEECCCCCC
SSINSIANQTELFGEFRTGPFKHSFTTGIELSREWGKRDTYTVATGTGAICNNGIGAPSG
CHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHCCCCCEEEEECCCHHHCCCCCCCCC
YNCTSLWSPNPADPWAGSISRNNDYAHARTTTKSIYGFDTIELTPRWQLNAGVRVDDYST
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCEEEEECCCEEECCCEEECCCCC
RFTDTKANGGKTYTRDDTLFNWQLGAVFKPAQNGSIYASYATSSTPAGMLLGEGSETQSL
EEECCCCCCCCEEECCCCEEEEEECEEECCCCCCCEEEEECCCCCCCEEEEECCCCCCCC
TPGRGGVGSNADQLSPEKNRSIEVGTKWNVLNDKLSLTAALFQIDTTNARVTLPNNQYAM
CCCCCCCCCCHHHCCCCCCCEEEECCEEEECCCCCEEEEEEEEEECCCCEEEECCCCEEE
VGNKRVQGLELGVAGQLTKQWQVFGGYTYMKSELRDNGKDTANNGHRFPNTPKHSFTMWT
ECCCEECEEEECCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEE
NYDVTPKFTVGGGAFYMSEVFGDPANLRAVPSYWRFDAMAQYRINKKLDLQLNVNNLFNR
CCCCCEEEEECCCCEEHHHHHCCCCCCEECCCHHHHHHEEEEECCCEEEEEECHHHHHCH
TYFDQAYPAHYASIAPGRSAFVTLNARY
HHCCCCCCCHHHCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKSRSDESKLGKFTTLCSVLAAGPAFAADGAPPPAPADAEGHLAPIEIKGRAEHSYKADF
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
SASAKFTAPLVDTPKSVTVIPQELIQTSGASTLTEALRTVPGITFGAGEGGNPLGDRPFI
CCCCEEEECCCCCCCCEEECCHHHHHCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCEE
RGYDTQGSMFVDGMRDTGATTREIFNTERVEITKGSDGAYGGRGGAGGSINLITKAPHLG
EEECCCCCEEECCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCC
TTAAASAGLGTDRYRRFTADGNWQFADHAAFRLNLMSHNNDVAGRDAVNNERWGVAPSIA
CHHHHHCCCCHHHHEEEECCCCEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEE
FGLGTPTRVTASYYHLSTDDLPDGGIPYFYTTTNKPANVDTIYPAPVDRHNFYGLIDRDF
ECCCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCCCEEEEECCHH
RKTTSDISTLRIEHDITPALTVRNTTRYTESTQDYIWTQPDDSQGNVINGKVWRRNNNRN
HHHHCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCEEECEEEECCCCCC
SSINSIANQTELFGEFRTGPFKHSFTTGIELSREWGKRDTYTVATGTGAICNNGIGAPSG
CHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHCCCCCEEEEECCCHHHCCCCCCCCC
YNCTSLWSPNPADPWAGSISRNNDYAHARTTTKSIYGFDTIELTPRWQLNAGVRVDDYST
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCEEEEECCCEEECCCEEECCCCC
RFTDTKANGGKTYTRDDTLFNWQLGAVFKPAQNGSIYASYATSSTPAGMLLGEGSETQSL
EEECCCCCCCCEEECCCCEEEEEECEEECCCCCCCEEEEECCCCCCCEEEEECCCCCCCC
TPGRGGVGSNADQLSPEKNRSIEVGTKWNVLNDKLSLTAALFQIDTTNARVTLPNNQYAM
CCCCCCCCCCHHHCCCCCCCEEEECCEEEECCCCCEEEEEEEEEECCCCEEEECCCCEEE
VGNKRVQGLELGVAGQLTKQWQVFGGYTYMKSELRDNGKDTANNGHRFPNTPKHSFTMWT
ECCCEECEEEECCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEE
NYDVTPKFTVGGGAFYMSEVFGDPANLRAVPSYWRFDAMAQYRINKKLDLQLNVNNLFNR
CCCCCEEEEECCCCEEHHHHHCCCCCCEECCCHHHHHHEEEEECCCEEEEEECHHHHHCH
TYFDQAYPAHYASIAPGRSAFVTLNARY
HHCCCCCCCHHHCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12910271; 10079522 [H]