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The map label for this gene is yiaD [C]

Identifier: 189353338

GI number: 189353338

Start: 1578848

End: 1580065

Strand: Reverse

Name: yiaD [C]

Synonym: BMULJ_04578

Alternate gene names: 189353338

Gene position: 1580065-1578848 (Counterclockwise)

Preceding gene: 189353339

Following gene: 189353335

Centisome position: 63.89

GC content: 66.5

Gene sequence:

>1218_bases
ATGAGTCTGATAACAGCCGATCCGCAAAGCCACGGCGGGAGCCTGGCGTCGCCGTCCGTCGCGACGAGGCTCAAGCGGGC
GGAGCAGTCGGTCAACCCGCTGCTCGAAGCGGCGCGCGTCCTGTTGAGCGCGTTGGCAGATACGCCCGATGTGCTCGATG
CCGATTCGATAGCCCGGCGGCGACGGTGGCTCGAGCATGAACTCCGGCTATTTGCGCGGCTCGGCGCTGAACTCGGGCTT
TCGCCGGAGCATATCCGGAGCGCCAGCTACTGCCTGTGTTCGGCGCTCGACGAGTCTGCGATGCAGACGCGCTGGGGCAA
AGGAGAGGCAACCGGTGTCGCATGGGAAGTCGATGGGCTCGCCGCGGCGATGGGTCACGACCGTCAGGCCGGCGACCGCG
TTTTCCAGCTGATCGACGAGGCGTTATGCAGCCCGCGCGAGGACCTTGATCTGATCGAGCTGTACCAGAACATCCTCGAT
CTCGGCTTTCGCGGGCGTTATCGATTCGAGCGCGACGGACAGCAGCGCTTGACGCGCGTTCGCGAGCGCGTGCACGACGT
GGTCGTGACGGGCGGGGTGGGCGCGAATTTCGCAAGGGAGTCGCTTCGACAAAGGCGGCGCACGGTCGACCCTTGGGTGC
GTCCATTGGCGAGGCGGCGATCGTCGCGCGTCGGGGCTGTCGTCGCCATAACCGCGGCGTTGCTGCTCGGAGCCGCCGGA
TATGCCGCTGTGGACCGTTGGGTCGTGTCGAGAGAGGCGCAACGCCTGTCGCCGTTCGACGCGCTGGCTCGCAATCTGGA
ACGGCGGCTCCGTGACGAGGTCGCAGCAGGGAATGTCGAACTGATCCGGGATCCCGCACGCCATGTCTTGACGCTCCGCT
TTGCCGGCATGTTCGTACCGGGCGCGGTAACGGTGGCGCCTTGGGGTGCTTCCGTCGTGGCGTCGGCTGGCCGGGAAATT
GCGTCGATCGCTGAAGGTATGGTCGTCAGGGTAGTGGGATACGCGGACAGCGCGCCGGCCGGGTCCGCGCGTCAGGTCTC
CAATCAGGCACTTTCCGAAGCACGTGCCGAAGATGTCGCCCGGATTCTTGTCGCGGCCGGCGTACCGGCGCATGGCCTCC
GCGTGGAAGGGCGCGGGGATGCAGACGCGTTGGCGGACAACGGTACCGAGTCGGGAAGGGCGAGGAATCGGCGCGTCGAA
GTGATCGTCGCGGAATAA

Upstream 100 bases:

>100_bases
TTCAGTTTGCCGGACAGCGGTCCGCCGCCGGGATTGCCACAGGGCATGTTGCCGATGAACGCCGGAAGCGTTTCCCGTTG
AATCGGAAGGGGCGAACAAG

Downstream 100 bases:

>100_bases
CGCGGAAAAACGTGGCGCTGGCGATTCTCTGCGATCGATACCATATCGAATGCCATTGATCGTCGGTGTCGATGCGCTCG
TCGACTCGGGCCGGGAGGCC

Product: putative OmpA/MotB family outer membrane protein

Products: NA

Alternate protein names: Type IV / VI Secretion System Protein DotU Family; DotU Family Type IV/VI Secretion System Protein; OmpA Family Protein; Outer Membrane Protein; Type VI Secretion System OmpA/MotB Family Protein; OmpA/MotB Domain Protein; Type VI Secretion System Core Protein; OmpA/MotB; SciP Protein; Flagellar Motor Rotation Protein MotB; Replication/Virulence Associated Protein; Type IV/VI Secretion System Protein; Ompa/Motb Domain Protein; DotU Family Type IV / VI Secretion System Protein; Type VI Secretion System Protein ImpK; OmpA-Family Protein; Chemotaxis Protein MotB; Outer Membrane Protein Ompa/Motb Family; OmpA Family; OmpA/MotB Family Outer Membrane Protein; T6ss U; Flagellar Motor Protein; OmpA/MotB-Family Outer Membrane Protein; Type IV / VI Secretion System Family Protein DotU

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MSLITADPQSHGGSLASPSVATRLKRAEQSVNPLLEAARVLLSALADTPDVLDADSIARRRRWLEHELRLFARLGAELGL
SPEHIRSASYCLCSALDESAMQTRWGKGEATGVAWEVDGLAAAMGHDRQAGDRVFQLIDEALCSPREDLDLIELYQNILD
LGFRGRYRFERDGQQRLTRVRERVHDVVVTGGVGANFARESLRQRRRTVDPWVRPLARRRSSRVGAVVAITAALLLGAAG
YAAVDRWVVSREAQRLSPFDALARNLERRLRDEVAAGNVELIRDPARHVLTLRFAGMFVPGAVTVAPWGASVVASAGREI
ASIAEGMVVRVVGYADSAPAGSARQVSNQALSEARAEDVARILVAAGVPAHGLRVEGRGDADALADNGTESGRARNRRVE
VIVAE

Sequences:

>Translated_405_residues
MSLITADPQSHGGSLASPSVATRLKRAEQSVNPLLEAARVLLSALADTPDVLDADSIARRRRWLEHELRLFARLGAELGL
SPEHIRSASYCLCSALDESAMQTRWGKGEATGVAWEVDGLAAAMGHDRQAGDRVFQLIDEALCSPREDLDLIELYQNILD
LGFRGRYRFERDGQQRLTRVRERVHDVVVTGGVGANFARESLRQRRRTVDPWVRPLARRRSSRVGAVVAITAALLLGAAG
YAAVDRWVVSREAQRLSPFDALARNLERRLRDEVAAGNVELIRDPARHVLTLRFAGMFVPGAVTVAPWGASVVASAGREI
ASIAEGMVVRVVGYADSAPAGSARQVSNQALSEARAEDVARILVAAGVPAHGLRVEGRGDADALADNGTESGRARNRRVE
VIVAE
>Mature_404_residues
SLITADPQSHGGSLASPSVATRLKRAEQSVNPLLEAARVLLSALADTPDVLDADSIARRRRWLEHELRLFARLGAELGLS
PEHIRSASYCLCSALDESAMQTRWGKGEATGVAWEVDGLAAAMGHDRQAGDRVFQLIDEALCSPREDLDLIELYQNILDL
GFRGRYRFERDGQQRLTRVRERVHDVVVTGGVGANFARESLRQRRRTVDPWVRPLARRRSSRVGAVVAITAALLLGAAGY
AAVDRWVVSREAQRLSPFDALARNLERRLRDEVAAGNVELIRDPARHVLTLRFAGMFVPGAVTVAPWGASVVASAGREIA
SIAEGMVVRVVGYADSAPAGSARQVSNQALSEARAEDVARILVAAGVPAHGLRVEGRGDADALADNGTESGRARNRRVEV
IVAE

Specific function: Unknown

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994946, Length=138, Percent_Identity=31.1594202898551, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43862; Mature: 43731

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLITADPQSHGGSLASPSVATRLKRAEQSVNPLLEAARVLLSALADTPDVLDADSIARR
CCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
RRWLEHELRLFARLGAELGLSPEHIRSASYCLCSALDESAMQTRWGKGEATGVAWEVDGL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHH
AAAMGHDRQAGDRVFQLIDEALCSPREDLDLIELYQNILDLGFRGRYRFERDGQQRLTRV
HHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
RERVHDVVVTGGVGANFARESLRQRRRTVDPWVRPLARRRSSRVGAVVAITAALLLGAAG
HHHHHHEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCH
YAAVDRWVVSREAQRLSPFDALARNLERRLRDEVAAGNVELIRDPARHVLTLRFAGMFVP
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECC
GAVTVAPWGASVVASAGREIASIAEGMVVRVVGYADSAPAGSARQVSNQALSEARAEDVA
CCEEECCCCHHHHHHCCHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
RILVAAGVPAHGLRVEGRGDADALADNGTESGRARNRRVEVIVAE
HHHHHCCCCCCCEEECCCCCHHHHHCCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure 
SLITADPQSHGGSLASPSVATRLKRAEQSVNPLLEAARVLLSALADTPDVLDADSIARR
CCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
RRWLEHELRLFARLGAELGLSPEHIRSASYCLCSALDESAMQTRWGKGEATGVAWEVDGL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHH
AAAMGHDRQAGDRVFQLIDEALCSPREDLDLIELYQNILDLGFRGRYRFERDGQQRLTRV
HHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
RERVHDVVVTGGVGANFARESLRQRRRTVDPWVRPLARRRSSRVGAVVAITAALLLGAAG
HHHHHHEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCH
YAAVDRWVVSREAQRLSPFDALARNLERRLRDEVAAGNVELIRDPARHVLTLRFAGMFVP
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECC
GAVTVAPWGASVVASAGREIASIAEGMVVRVVGYADSAPAGSARQVSNQALSEARAEDVA
CCEEECCCCHHHHHHCCHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
RILVAAGVPAHGLRVEGRGDADALADNGTESGRARNRRVEVIVAE
HHHHHCCCCCCCEEECCCCCHHHHHCCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA