Click here to switch to the map view.

The map label for this gene is ykgB [H]

Identifier: 189353303

GI number: 189353303

Start: 1541473

End: 1541979

Strand: Reverse

Name: ykgB [H]

Synonym: BMULJ_04543

Alternate gene names: 189353303

Gene position: 1541979-1541473 (Counterclockwise)

Preceding gene: 189353304

Following gene: 189353301

Centisome position: 62.35

GC content: 63.71

Gene sequence:

>507_bases
ATGAGCACGCGTGCAAATCAGTTCCATCTGCAGATCGCTGAAAAGGGTGTTGGGTCGCTGTCGCTTCTTGCGCTGCTCCG
ATGGGCGCTCGTCGTCATCTTTCTGTGGTTCGGCGGCATGAAGTTCACGGGATATGAAGCCAACGGCATCGCACCGTTCG
TCGTCAACAGCCCGATCATGAGCTGGCTGAACGCGTCGTTCGGCGTTCAGGGCGCAAGCAACGTGATCGGCGTGCTCGAA
CTCTCGACGGCTGCGGCGCTGATCGCCGGGGCGTTCCAGCCCGTGCTGTCCGCGCTGGGTGCGGCGATGTCGGCCGCGAC
TTATCTGATCACGCTGACGTTTTTCCTGAGCACACCGGGTGTCGCGGAAGCGACGGCCGGCGGCTTTCCGGCGATCTCGG
CGCTGCCTGGCCAGTTCCTGCTCAAGGACCTGGTGCTGCTCGCCGCGTCGCTTTGTCTGCTCGTCGCATCTGTGCGAAGC
GCGGAGCCCGGCATCGACCGGCAGTGA

Upstream 100 bases:

>100_bases
CCGGATGTCGGCGCGTGTCGCAAACGTGCGATCGCTCGAGCGGCCGCGCGTGAAATTTCTCGCCAACGAAGTCAGTTCTC
ACTTGAATCGGATATCGAAT

Downstream 100 bases:

>100_bases
CCGGTTACGGCCGAGACGCATCGCGCGCGAGAACCGATGGGGGTGAAGCGCGGCGGACGGCGGAGACCGCCTGCCGCGAT
CGCAGGCGACCGGTCGCTAC

Product: probable membrane spanning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MSTRANQFHLQIAEKGVGSLSLLALLRWALVVIFLWFGGMKFTGYEANGIAPFVVNSPIMSWLNASFGVQGASNVIGVLE
LSTAAALIAGAFQPVLSALGAAMSAATYLITLTFFLSTPGVAEATAGGFPAISALPGQFLLKDLVLLAASLCLLVASVRS
AEPGIDRQ

Sequences:

>Translated_168_residues
MSTRANQFHLQIAEKGVGSLSLLALLRWALVVIFLWFGGMKFTGYEANGIAPFVVNSPIMSWLNASFGVQGASNVIGVLE
LSTAAALIAGAFQPVLSALGAAMSAATYLITLTFFLSTPGVAEATAGGFPAISALPGQFLLKDLVLLAASLCLLVASVRS
AEPGIDRQ
>Mature_167_residues
STRANQFHLQIAEKGVGSLSLLALLRWALVVIFLWFGGMKFTGYEANGIAPFVVNSPIMSWLNASFGVQGASNVIGVLEL
STAAALIAGAFQPVLSALGAAMSAATYLITLTFFLSTPGVAEATAGGFPAISALPGQFLLKDLVLLAASLCLLVASVRSA
EPGIDRQ

Specific function: Unknown

COG id: COG3059

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081715, Length=167, Percent_Identity=32.3353293413174, Blast_Score=77, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007339 [H]

Pfam domain/function: PF04224 DUF417 [H]

EC number: NA

Molecular weight: Translated: 17388; Mature: 17256

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTRANQFHLQIAEKGVGSLSLLALLRWALVVIFLWFGGMKFTGYEANGIAPFVVNSPIM
CCCCCCHHEEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHCCHHHH
SWLNASFGVQGASNVIGVLELSTAAALIAGAFQPVLSALGAAMSAATYLITLTFFLSTPG
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VAEATAGGFPAISALPGQFLLKDLVLLAASLCLLVASVRSAEPGIDRQ
CCHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
STRANQFHLQIAEKGVGSLSLLALLRWALVVIFLWFGGMKFTGYEANGIAPFVVNSPIM
CCCCCHHEEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHCCHHHH
SWLNASFGVQGASNVIGVLELSTAAALIAGAFQPVLSALGAAMSAATYLITLTFFLSTPG
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VAEATAGGFPAISALPGQFLLKDLVLLAASLCLLVASVRSAEPGIDRQ
CCHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]