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The map label for this gene is dppD [H]

Identifier: 189353213

GI number: 189353213

Start: 1442470

End: 1443375

Strand: Direct

Name: dppD [H]

Synonym: BMULJ_04451

Alternate gene names: 189353213

Gene position: 1442470-1443375 (Clockwise)

Preceding gene: 189353212

Following gene: 189353214

Centisome position: 58.32

GC content: 70.75

Gene sequence:

>906_bases
ATGCCAACCCCTTCCACCGTCGCAACCGTCGCGCCGCTGTGCGAGATCGACGGCCTGAAAATCGGCTTTCGTGGCCACGA
CGGCACCGTGACCGACGCGGTGCGCGACCTGTCGTTGACGCTCGCACCGGGCGAGCGGCTCGGCATCGTCGGCGAATCGG
GTTCCGGCAAGTCGCTGACGGGCCGCGCGCTGCTCGGGCTGCTGCCGGACGCCGCGCGCTGCTCGGCACGGACGATGCGC
TTCGCGGGCCACGACCTGCTCGCGATGTCGCCGCGCGAGCGCCGGCGCCTGTGCGGCAGCCAGATGGGCATGATCCTGCA
GGATCCGAAGTATTCGCTGAACCCCGTGATGACCGTCGCGAAGCAGATGGGCGAAGCGTTCCGGCGGCACGAGCCGGGCC
TGCGCGGCCGCGCGCTGCGCGAGCGGATCGTCGAGGCGCTCGCGGCCGTGCAGATCCGCGATCCCGAGCGGGTCGCCGAC
GCGTATCCGCACGAGCTGTCCGGCGGGATGGGCCAGCGCGTGATGATCGCGATGATGGTCTCGACCGGGCCGCGGCTGCT
GATTGCCGACGAGCCGACGTCCGCGCTCGACGTCGCCGTGTCGATGCAGGTGCTCGCGGTACTCGACGCGATGATCGCGC
GGCACGGCACGGGGCTGATGTTCATCAGCCACGACCTGCCGCTCGTGATGTCGTTCTGCGATCGCGTCGCCGTGATGTAC
GCGGGACGCGTCGTCGAGACCTGCGCCGCGCGCGATCTGCAGCATGCGACACATCCGTACACGCGCGGGCTGCTCGCGGC
CAATCCGCCGCTCGCGAATCCGCCGGACGAGCTGCCCGTGCTGCAGCGCGATCCGGCATGGCTCGACGTGCCTGCGCGCG
CCATTCGACAGGAGGCTGCACGATGA

Upstream 100 bases:

>100_bases
GCGACGCTGCCCGGCGCGGCGATCCTGCTCGTGAGCCTCGCGTTCAACCTGCTCGGCGACGGGCTGCGCGACGTCTTCGA
TCCGCGACATGGAGCGTGAC

Downstream 100 bases:

>100_bases
TCGACGTCGATCATGTATCGATCCGTTTTCCGACTCGCACGGGCCATGTCGACGCCGTGCGCGACGCGAGCTTCGCGGTG
CGCGACGGCGAGGTGTTCGG

Product: peptide/nickel transport system ATP-binding protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MPTPSTVATVAPLCEIDGLKIGFRGHDGTVTDAVRDLSLTLAPGERLGIVGESGSGKSLTGRALLGLLPDAARCSARTMR
FAGHDLLAMSPRERRRLCGSQMGMILQDPKYSLNPVMTVAKQMGEAFRRHEPGLRGRALRERIVEALAAVQIRDPERVAD
AYPHELSGGMGQRVMIAMMVSTGPRLLIADEPTSALDVAVSMQVLAVLDAMIARHGTGLMFISHDLPLVMSFCDRVAVMY
AGRVVETCAARDLQHATHPYTRGLLAANPPLANPPDELPVLQRDPAWLDVPARAIRQEAAR

Sequences:

>Translated_301_residues
MPTPSTVATVAPLCEIDGLKIGFRGHDGTVTDAVRDLSLTLAPGERLGIVGESGSGKSLTGRALLGLLPDAARCSARTMR
FAGHDLLAMSPRERRRLCGSQMGMILQDPKYSLNPVMTVAKQMGEAFRRHEPGLRGRALRERIVEALAAVQIRDPERVAD
AYPHELSGGMGQRVMIAMMVSTGPRLLIADEPTSALDVAVSMQVLAVLDAMIARHGTGLMFISHDLPLVMSFCDRVAVMY
AGRVVETCAARDLQHATHPYTRGLLAANPPLANPPDELPVLQRDPAWLDVPARAIRQEAAR
>Mature_300_residues
PTPSTVATVAPLCEIDGLKIGFRGHDGTVTDAVRDLSLTLAPGERLGIVGESGSGKSLTGRALLGLLPDAARCSARTMRF
AGHDLLAMSPRERRRLCGSQMGMILQDPKYSLNPVMTVAKQMGEAFRRHEPGLRGRALRERIVEALAAVQIRDPERVADA
YPHELSGGMGQRVMIAMMVSTGPRLLIADEPTSALDVAVSMQVLAVLDAMIARHGTGLMFISHDLPLVMSFCDRVAVMYA
GRVVETCAARDLQHATHPYTRGLLAANPPLANPPDELPVLQRDPAWLDVPARAIRQEAAR

Specific function: Part of the binding-protein-dependent transport system for dipeptides. Probably responsible for energy coupling to the transport system [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI21536378, Length=242, Percent_Identity=28.099173553719, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI27436953, Length=213, Percent_Identity=23.943661971831, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1789963, Length=270, Percent_Identity=44.4444444444444, Blast_Score=213, Evalue=9e-57,
Organism=Escherichia coli, GI48994883, Length=278, Percent_Identity=43.8848920863309, Blast_Score=205, Evalue=4e-54,
Organism=Escherichia coli, GI1787759, Length=272, Percent_Identity=42.6470588235294, Blast_Score=202, Evalue=2e-53,
Organism=Escherichia coli, GI1788506, Length=273, Percent_Identity=44.3223443223443, Blast_Score=197, Evalue=1e-51,
Organism=Escherichia coli, GI145693107, Length=263, Percent_Identity=43.3460076045627, Blast_Score=195, Evalue=4e-51,
Organism=Escherichia coli, GI1787548, Length=269, Percent_Identity=39.0334572490706, Blast_Score=179, Evalue=1e-46,
Organism=Escherichia coli, GI1787500, Length=266, Percent_Identity=39.4736842105263, Blast_Score=171, Evalue=6e-44,
Organism=Escherichia coli, GI1787758, Length=268, Percent_Identity=35.4477611940299, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1789962, Length=250, Percent_Identity=36.8, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1789890, Length=236, Percent_Identity=37.2881355932203, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI48994997, Length=239, Percent_Identity=34.3096234309623, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI1789891, Length=227, Percent_Identity=37.0044052863436, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1789032, Length=233, Percent_Identity=34.7639484978541, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1786398, Length=268, Percent_Identity=30.9701492537313, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1787370, Length=246, Percent_Identity=31.3008130081301, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787547, Length=270, Percent_Identity=28.5185185185185, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI87081791, Length=263, Percent_Identity=32.6996197718631, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1788761, Length=239, Percent_Identity=30.5439330543933, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1790467, Length=276, Percent_Identity=27.1739130434783, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1787105, Length=237, Percent_Identity=31.2236286919831, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1789991, Length=224, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1789672, Length=240, Percent_Identity=31.25, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789873, Length=203, Percent_Identity=34.4827586206897, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1790525, Length=229, Percent_Identity=27.5109170305677, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI87081834, Length=210, Percent_Identity=32.3809523809524, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1787029, Length=224, Percent_Identity=30.3571428571429, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1787712, Length=226, Percent_Identity=29.646017699115, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1788225, Length=257, Percent_Identity=29.9610894941634, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI1787089, Length=236, Percent_Identity=28.8135593220339, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI87082267, Length=219, Percent_Identity=29.2237442922374, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1786703, Length=237, Percent_Identity=29.957805907173, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788450, Length=214, Percent_Identity=27.5700934579439, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI87081782, Length=223, Percent_Identity=28.2511210762332, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI87081709, Length=221, Percent_Identity=26.6968325791855, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1788644, Length=171, Percent_Identity=32.1637426900585, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787041, Length=234, Percent_Identity=26.0683760683761, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1790190, Length=223, Percent_Identity=27.3542600896861, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1786319, Length=221, Percent_Identity=24.4343891402715, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786345, Length=214, Percent_Identity=30.3738317757009, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI48995001, Length=260, Percent_Identity=27.6923076923077, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786872, Length=202, Percent_Identity=28.2178217821782, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1786253, Length=217, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789586, Length=232, Percent_Identity=29.7413793103448, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI48994943, Length=252, Percent_Identity=29.3650793650794, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1786563, Length=216, Percent_Identity=28.2407407407407, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787164, Length=212, Percent_Identity=28.3018867924528, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI193202349, Length=228, Percent_Identity=27.6315789473684, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71984940, Length=224, Percent_Identity=28.125, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI25146777, Length=234, Percent_Identity=26.4957264957265, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24641565, Length=222, Percent_Identity=31.981981981982, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24643674, Length=211, Percent_Identity=24.1706161137441, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI23397593, Length=239, Percent_Identity=28.8702928870293, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010066
- InterPro:   IPR013563 [H]

Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]

EC number: NA

Molecular weight: Translated: 32450; Mature: 32319

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPSTVATVAPLCEIDGLKIGFRGHDGTVTDAVRDLSLTLAPGERLGIVGESGSGKSLT
CCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCEEEECCCCEEEEEECCCCCCCCH
GRALLGLLPDAARCSARTMRFAGHDLLAMSPRERRRLCGSQMGMILQDPKYSLNPVMTVA
HHHHHHHCCCHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCEEECCCCCCCHHHHHH
KQMGEAFRRHEPGLRGRALRERIVEALAAVQIRDPERVADAYPHELSGGMGQRVMIAMMV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHCCCCCCHHHEEHEE
STGPRLLIADEPTSALDVAVSMQVLAVLDAMIARHGTGLMFISHDLPLVMSFCDRVAVMY
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHH
AGRVVETCAARDLQHATHPYTRGLLAANPPLANPPDELPVLQRDPAWLDVPARAIRQEAA
HHHHHHHHHHHHHHHHCCHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC
R
C
>Mature Secondary Structure 
PTPSTVATVAPLCEIDGLKIGFRGHDGTVTDAVRDLSLTLAPGERLGIVGESGSGKSLT
CCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCEEEECCCCEEEEEECCCCCCCCH
GRALLGLLPDAARCSARTMRFAGHDLLAMSPRERRRLCGSQMGMILQDPKYSLNPVMTVA
HHHHHHHCCCHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCEEECCCCCCCHHHHHH
KQMGEAFRRHEPGLRGRALRERIVEALAAVQIRDPERVADAYPHELSGGMGQRVMIAMMV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHCCCCCCHHHEEHEE
STGPRLLIADEPTSALDVAVSMQVLAVLDAMIARHGTGLMFISHDLPLVMSFCDRVAVMY
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHH
AGRVVETCAARDLQHATHPYTRGLLAANPPLANPPDELPVLQRDPAWLDVPARAIRQEAA
HHHHHHHHHHHHHHHHCCHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]