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The map label for this gene is yphA [H]

Identifier: 189353172

GI number: 189353172

Start: 1389430

End: 1389849

Strand: Reverse

Name: yphA [H]

Synonym: BMULJ_04408

Alternate gene names: 189353172

Gene position: 1389849-1389430 (Counterclockwise)

Preceding gene: 189353173

Following gene: 189353171

Centisome position: 56.2

GC content: 63.57

Gene sequence:

>420_bases
ATGACACCGAACCAACCGTTTCTCGCGTCCCAGCGCGATGTGCTGCTGCTGCTTGCCCGTATCCTGCTCGTCATCCTGTT
CGTGATGTTCGGCTGGAAGAAGATCGTCGACTTCTCCGGCACGATCGCATTCATGGGCACCGAAGGCGCGCCCGCGCCGA
TCGTGTCCGCCGCGATCGCGGTCGTGATGGAACTCGTCGTCGGGATCGCGATCCTGGTCGGCTTCCAGACGCGGCCGCTC
GCGCTGCTGCTTGCGCTGTACACGATCGGCACCGCGCTCATCGGCCACCGCTACTGGACGATGACGGGCGGCGAGCAGAT
CAACAACATGATTCATTTCTACAAGAACATCGCGATCTCGGGCGGCCTGCTCGCGCTGTGCGCGGCGGGGCCCGGTCGGT
TTTCGATCGATCGCGGATGA

Upstream 100 bases:

>100_bases
GGTTGTTGCAGAGCGGGGCGGGCGGCACAGGCGGCCGCCCGCTCCGGTTCGTTCGCAATGCGGTGCGCGTCGCGCGCATC
GTCTTTCGCTGATCAATACC

Downstream 100 bases:

>100_bases
CCGGGCGCGCGCATGGGGCGCGCGTCGGACGGTCGAGACTCCGAGGGGGCATCACTTTGCGACTCACATACTTCGCATCG
CTGATCGCGGCCGCCGCACC

Product: predicted membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MTPNQPFLASQRDVLLLLARILLVILFVMFGWKKIVDFSGTIAFMGTEGAPAPIVSAAIAVVMELVVGIAILVGFQTRPL
ALLLALYTIGTALIGHRYWTMTGGEQINNMIHFYKNIAISGGLLALCAAGPGRFSIDRG

Sequences:

>Translated_139_residues
MTPNQPFLASQRDVLLLLARILLVILFVMFGWKKIVDFSGTIAFMGTEGAPAPIVSAAIAVVMELVVGIAILVGFQTRPL
ALLLALYTIGTALIGHRYWTMTGGEQINNMIHFYKNIAISGGLLALCAAGPGRFSIDRG
>Mature_138_residues
TPNQPFLASQRDVLLLLARILLVILFVMFGWKKIVDFSGTIAFMGTEGAPAPIVSAAIAVVMELVVGIAILVGFQTRPLA
LLLALYTIGTALIGHRYWTMTGGEQINNMIHFYKNIAISGGLLALCAAGPGRFSIDRG

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI145693171, Length=129, Percent_Identity=51.937984496124, Blast_Score=137, Evalue=2e-34,
Organism=Escherichia coli, GI87082210, Length=127, Percent_Identity=41.7322834645669, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 14904; Mature: 14773

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPNQPFLASQRDVLLLLARILLVILFVMFGWKKIVDFSGTIAFMGTEGAPAPIVSAAIA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
VVMELVVGIAILVGFQTRPLALLLALYTIGTALIGHRYWTMTGGEQINNMIHFYKNIAIS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHEEECCHHHHHHHHHHHHHHHCC
GGLLALCAAGPGRFSIDRG
CCHHHEECCCCCCCCCCCC
>Mature Secondary Structure 
TPNQPFLASQRDVLLLLARILLVILFVMFGWKKIVDFSGTIAFMGTEGAPAPIVSAAIA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
VVMELVVGIAILVGFQTRPLALLLALYTIGTALIGHRYWTMTGGEQINNMIHFYKNIAIS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHEEECCHHHHHHHHHHHHHHHCC
GGLLALCAAGPGRFSIDRG
CCHHHEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]