Click here to switch to the map view.

The map label for this gene is omp32 [H]

Identifier: 189353171

GI number: 189353171

Start: 1388270

End: 1389304

Strand: Reverse

Name: omp32 [H]

Synonym: BMULJ_04407

Alternate gene names: 189353171

Gene position: 1389304-1388270 (Counterclockwise)

Preceding gene: 189353172

Following gene: 189353170

Centisome position: 56.18

GC content: 66.38

Gene sequence:

>1035_bases
GTGACGCTGTACGGCCGTATCGACGGCGGCGTCGAATACCTCAACCACATCGCGACGCCGAACGGCAGCGCGACGCGCTG
GAGCGCCGAAGGCGGCGACTGGGGCACCAGCATGTTCGGGCTGAAGGGCGTCGAGGATCTCGGCGGCGGGATGTCGACCG
TGTTCAACCTCGAGACCGCGTTCCAGGTGATGAACGGCCGCACCGGCGGCGGCCGCCTCTGGTCGCGGCGCGCGTACGTC
GGGCTGAAGAGCGACACGTGGGGCCAGCTGCAGGCCGGTCGCAACCTGTTCATCGACAGCGACGGCGTGTGGGAATTCGA
TCCGTTCGTGCAGCAGGCGTTCTCGTCGGCCTCGCTCGTGCGCGGCCGCAACTGGCAGCAGACGAGCAACAACATCGAGT
ACCACAGCCCCGTGATCGGCGGGTTCGACGTGCAGGCGCAGTACGCGTTCGGCAATCAGTCGCGCGGTTTCAATTACGGC
GCGGCCGACGATTTCGGGCGCTCGGACGGGATCATGATCTCGTACCACTCGCCGGTGCTCGACGTGCGCGGCATCTACGA
CGAGCTGCGCGACAACAACGGCAAGTTCAGCAACATCTTCACGGCATCGCGCGAGTATTTCGTCGGCGCGAACGTCAAGA
TTTCAAAGTTCAAGATCCAGGGCGCCTATACGCACTACCAGGCGCCGGACAGCCCGGCCGGCGTCGCCGATCGCGCCGAT
CACTACTGGCTCGGCGCGACCTATGCGGCGACCCCGCAATGGGCGATGACGGCGGGCGGCTACTACGTGAAGGTCGGCGA
CGGCGGCGGCGATGCGTCGCACGATCCGTCGGGCCACGCGATCATGTACGTGCTCGGCACCACGTACAACCTGTCGAAGC
GCACGTTCCTGTACGGGACGGTCGCGTACGTGCGCAACGGCGGCAACTCGAACTTCTCGCTGCTCGCGACGCCGCGCGAC
GCGTCGCCGAACACGAGCCCGATGACGGGCGAGTCGCAGACGGGCGCGTACGTGGGGATGATGCATACGTTCTGA

Upstream 100 bases:

>100_bases
CGGACGGTCGAGACTCCGAGGGGGCATCACTTTGCGACTCACATACTTCGCATCGCTGATCGCGGCCGCCGCACCGGCGG
TGGCGATCGCGCAGACCAGC

Downstream 100 bases:

>100_bases
GCGGGCGGCGTGGGTAAAAAAGGCACGGACCGAGAAGGTCCGTGCCTTTTTGTGTTTACGTGGCTTGCTTTGGCTGTTGC
GGCACATGCTGTTGGAATAG

Product: outer membrane porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MTLYGRIDGGVEYLNHIATPNGSATRWSAEGGDWGTSMFGLKGVEDLGGGMSTVFNLETAFQVMNGRTGGGRLWSRRAYV
GLKSDTWGQLQAGRNLFIDSDGVWEFDPFVQQAFSSASLVRGRNWQQTSNNIEYHSPVIGGFDVQAQYAFGNQSRGFNYG
AADDFGRSDGIMISYHSPVLDVRGIYDELRDNNGKFSNIFTASREYFVGANVKISKFKIQGAYTHYQAPDSPAGVADRAD
HYWLGATYAATPQWAMTAGGYYVKVGDGGGDASHDPSGHAIMYVLGTTYNLSKRTFLYGTVAYVRNGGNSNFSLLATPRD
ASPNTSPMTGESQTGAYVGMMHTF

Sequences:

>Translated_344_residues
MTLYGRIDGGVEYLNHIATPNGSATRWSAEGGDWGTSMFGLKGVEDLGGGMSTVFNLETAFQVMNGRTGGGRLWSRRAYV
GLKSDTWGQLQAGRNLFIDSDGVWEFDPFVQQAFSSASLVRGRNWQQTSNNIEYHSPVIGGFDVQAQYAFGNQSRGFNYG
AADDFGRSDGIMISYHSPVLDVRGIYDELRDNNGKFSNIFTASREYFVGANVKISKFKIQGAYTHYQAPDSPAGVADRAD
HYWLGATYAATPQWAMTAGGYYVKVGDGGGDASHDPSGHAIMYVLGTTYNLSKRTFLYGTVAYVRNGGNSNFSLLATPRD
ASPNTSPMTGESQTGAYVGMMHTF
>Mature_343_residues
TLYGRIDGGVEYLNHIATPNGSATRWSAEGGDWGTSMFGLKGVEDLGGGMSTVFNLETAFQVMNGRTGGGRLWSRRAYVG
LKSDTWGQLQAGRNLFIDSDGVWEFDPFVQQAFSSASLVRGRNWQQTSNNIEYHSPVIGGFDVQAQYAFGNQSRGFNYGA
ADDFGRSDGIMISYHSPVLDVRGIYDELRDNNGKFSNIFTASREYFVGANVKISKFKIQGAYTHYQAPDSPAGVADRADH
YWLGATYAATPQWAMTAGGYYVKVGDGGGDASHDPSGHAIMYVLGTTYNLSKRTFLYGTVAYVRNGGNSNFSLLATPRDA
SPNTSPMTGESQTGAYVGMMHTF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 37387; Mature: 37255

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLYGRIDGGVEYLNHIATPNGSATRWSAEGGDWGTSMFGLKGVEDLGGGMSTVFNLETA
CEEEEECCCHHHHHHHHCCCCCCCEEEECCCCCCCCHHHCCCCHHHHCCCHHEEEEHHHH
FQVMNGRTGGGRLWSRRAYVGLKSDTWGQLQAGRNLFIDSDGVWEFDPFVQQAFSSASLV
HHHHCCCCCCCCEEEEEEEEEECCCCCCHHHCCCEEEECCCCCEECCHHHHHHHCCHHHH
RGRNWQQTSNNIEYHSPVIGGFDVQAQYAFGNQSRGFNYGAADDFGRSDGIMISYHSPVL
CCCCCCCCCCCCEECCCEECCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCE
DVRGIYDELRDNNGKFSNIFTASREYFVGANVKISKFKIQGAYTHYQAPDSPAGVADRAD
EHHHHHHHHHCCCCCEEEEEECCCCEEEECCEEEEEEEEEEEEEECCCCCCCCCCCCCCC
HYWLGATYAATPQWAMTAGGYYVKVGDGGGDASHDPSGHAIMYVLGTTYNLSKRTFLYGT
CEEEEEEEECCCCEEEECCCEEEEEECCCCCCCCCCCCCEEEEEEECCEECCCCEEEEEE
VAYVRNGGNSNFSLLATPRDASPNTSPMTGESQTGAYVGMMHTF
EEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure 
TLYGRIDGGVEYLNHIATPNGSATRWSAEGGDWGTSMFGLKGVEDLGGGMSTVFNLETA
EEEEECCCHHHHHHHHCCCCCCCEEEECCCCCCCCHHHCCCCHHHHCCCHHEEEEHHHH
FQVMNGRTGGGRLWSRRAYVGLKSDTWGQLQAGRNLFIDSDGVWEFDPFVQQAFSSASLV
HHHHCCCCCCCCEEEEEEEEEECCCCCCHHHCCCEEEECCCCCEECCHHHHHHHCCHHHH
RGRNWQQTSNNIEYHSPVIGGFDVQAQYAFGNQSRGFNYGAADDFGRSDGIMISYHSPVL
CCCCCCCCCCCCEECCCEECCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCE
DVRGIYDELRDNNGKFSNIFTASREYFVGANVKISKFKIQGAYTHYQAPDSPAGVADRAD
EHHHHHHHHHCCCCCEEEEEECCCCEEEECCEEEEEEEEEEEEEECCCCCCCCCCCCCCC
HYWLGATYAATPQWAMTAGGYYVKVGDGGGDASHDPSGHAIMYVLGTTYNLSKRTFLYGT
CEEEEEEEECCCCEEEECCCEEEEEECCCCCCCCCCCCCEEEEEEECCEECCCCEEEEEE
VAYVRNGGNSNFSLLATPRDASPNTSPMTGESQTGAYVGMMHTF
EEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]