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The map label for this gene is ynfJ [C]

Identifier: 189353152

GI number: 189353152

Start: 1350815

End: 1352602

Strand: Direct

Name: ynfJ [C]

Synonym: BMULJ_04388

Alternate gene names: 189353152

Gene position: 1350815-1352602 (Clockwise)

Preceding gene: 189353151

Following gene: 189353154

Centisome position: 54.62

GC content: 70.47

Gene sequence:

>1788_bases
ATGAACGCACCGCACAAACGCGATTTCTCGACCAACGAACGCCTGCCCAGGATCGCGTTGCTTGCCGCCGTGATCGGCCT
GCTCAGCACGCTCGCGGCGTTCGTGCTGTTGAGCCTGATCCATCTGTTCACGAACCTGTTCTTCTTCCAGCAGTTCTCGT
TCGCGGACCGCTCGCCCGCCGGCAATACGCTCGGTGCGTGGGTCATCGTCGTCCCGGTGATCGGCGCGCTCGTCGTCGGG
CTGATGGCGCGCTTCGGTTCGGAGAAGATCCGCGGGCACGGCATCCCGGAAGCGATCGAGGCGATCCTGTTCGGCAAGAG
CCGCATGTCGCCGAAGGTCGCGGTGCTCAAGCCGCTGTCGTCGGGCATCGTGATCGGCAGCGGCGGCCCGTTCGGCGCCG
AAGGCCCGATCATCATGACGGGCGGCGCGCTCGGCTCGCTGATCGCGCAATGCGTGCACGTGACGGCCGCCGAGCGCAAG
ACGCTGCTCGTCGCCGGCGCGGCCGCCGGCATGACGGCCGTGTTCGGCACGCCGGTCGCCGCGGTGCTGCTCGCCGTCGA
GCTCCTGCTGTTCGAATGGCGGCCGCGCAGCTTCCTGCCGGTCGCGCTCGCCTGTGCGGTGGCCGGCTTCGCGCGCGCGC
TGTTCTTCGGCGTCGAGCCGCTGTTTCCGCTGACGACGGCCGCGCCGTCGCCGGTCGCGCTGCTGTCCTGCCTCGTCGCG
GGCCTGCTGTCCGGCGTACTCGCCTGCGGGCTGTCGGCCGCGCTCTATCGCGTCGAGGACACGTTCGCGAAGCTGCCCGT
GCACTGGATGTGGTGGCCGGCGCTCGGCGCGATCGTGATCGGCGTCGGCGGCTGGCTCGAGCCGCGCGCGCTCGGCGTCG
GCTACGACGTGATCGGCGATCTGCTGCATCAGCACATCGCGCTGCAGATCGCCCTTGCGTTGCTCGTCGTGAAGGCCGTG
ATGTGGGTCATCGCGCTCGGCTCGGGCACGTCGGGCGGCGTGCTCGCGCCGCTGCTGATGCTCGGTGCGGGCCTCGGCAC
CGTGCTGTCGCCGGTGCTGCCGGGCGGCGATCCGGCGCTGTGGCCGCTCGTCTGCATGGCGGCGACGCTCGGCGCGACGC
TCGGCGCACCGCTGACCGCGATCGTCTTCGCATTCGGACTGACGCACGACGCGAATGCGCTGCTGCCGCTGCTCGCCGCG
ACGCTCGTCGCGCACGGCTTCGCGACGGTCGTGATGAAGCGCTCGATCATGACCGAGAAGATCGCGCGCCGCGGCTATCA
CATCTATCGCGAATACGGCGTCGATCCGCTCGAACGGCACGACGTCGGCGAGGTGATGACGCCCGTCGACGCGCTCGTCG
CGATCGACGGCACGGCGACGCTCGAGGCGGTGGCCGCGCAGTTCTTCGGCGCGCAGCAAACGCATCGCGCCTATCCGGTC
GTACAGAACGGCCGGCTGCTCGGCGTCGTCGATCGCGCGTTCGTCGACGCGCAGCGCGCGCAACGCACGCCCGACACGTC
GATCGCGACCGCGCTCGCCGATCGCGCGCCGGCGATCGCGCTGGCGCACGAGACCTGCCGCCTCGTCGCGTCACGCCTCG
CGATGCTCGGGCTCGAGCGGCTGCCGGTCGTCGACGATCCGCAATCGATGCGCCTCACCGGCCTCGTGTCGCGCAGCGAT
CTGATCAAGCCGGCGCTTCAGCATTTCGACGACGAACACAAGCGCGAGCGCTTCCGTCCGATCGTGCCGGCGAACCTGCG
CGATCCGGGTGCGCGCAAGGCGGGCTGA

Upstream 100 bases:

>100_bases
TTGCGCGCCTCGCGGCGATGCATCGCGCCGAGCTGAAGTCGCTCAAGGGCGCATTCCAGGTTCCCCAGATCGATTACTGA
CCTCCGTTTTTCCGACTCCG

Downstream 100 bases:

>100_bases
TACGGTCGCGGGGCCGCATTGCCGCGTTGCGCTGCCCCGCGCCGCACCGTCGCTGCGTTTAAAGTTGGTTGACAATCAAT
CAGACAAAAGTTTGTCATCA

Product: putative chloride channel protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 595; Mature: 595

Protein sequence:

>595_residues
MNAPHKRDFSTNERLPRIALLAAVIGLLSTLAAFVLLSLIHLFTNLFFFQQFSFADRSPAGNTLGAWVIVVPVIGALVVG
LMARFGSEKIRGHGIPEAIEAILFGKSRMSPKVAVLKPLSSGIVIGSGGPFGAEGPIIMTGGALGSLIAQCVHVTAAERK
TLLVAGAAAGMTAVFGTPVAAVLLAVELLLFEWRPRSFLPVALACAVAGFARALFFGVEPLFPLTTAAPSPVALLSCLVA
GLLSGVLACGLSAALYRVEDTFAKLPVHWMWWPALGAIVIGVGGWLEPRALGVGYDVIGDLLHQHIALQIALALLVVKAV
MWVIALGSGTSGGVLAPLLMLGAGLGTVLSPVLPGGDPALWPLVCMAATLGATLGAPLTAIVFAFGLTHDANALLPLLAA
TLVAHGFATVVMKRSIMTEKIARRGYHIYREYGVDPLERHDVGEVMTPVDALVAIDGTATLEAVAAQFFGAQQTHRAYPV
VQNGRLLGVVDRAFVDAQRAQRTPDTSIATALADRAPAIALAHETCRLVASRLAMLGLERLPVVDDPQSMRLTGLVSRSD
LIKPALQHFDDEHKRERFRPIVPANLRDPGARKAG

Sequences:

>Translated_595_residues
MNAPHKRDFSTNERLPRIALLAAVIGLLSTLAAFVLLSLIHLFTNLFFFQQFSFADRSPAGNTLGAWVIVVPVIGALVVG
LMARFGSEKIRGHGIPEAIEAILFGKSRMSPKVAVLKPLSSGIVIGSGGPFGAEGPIIMTGGALGSLIAQCVHVTAAERK
TLLVAGAAAGMTAVFGTPVAAVLLAVELLLFEWRPRSFLPVALACAVAGFARALFFGVEPLFPLTTAAPSPVALLSCLVA
GLLSGVLACGLSAALYRVEDTFAKLPVHWMWWPALGAIVIGVGGWLEPRALGVGYDVIGDLLHQHIALQIALALLVVKAV
MWVIALGSGTSGGVLAPLLMLGAGLGTVLSPVLPGGDPALWPLVCMAATLGATLGAPLTAIVFAFGLTHDANALLPLLAA
TLVAHGFATVVMKRSIMTEKIARRGYHIYREYGVDPLERHDVGEVMTPVDALVAIDGTATLEAVAAQFFGAQQTHRAYPV
VQNGRLLGVVDRAFVDAQRAQRTPDTSIATALADRAPAIALAHETCRLVASRLAMLGLERLPVVDDPQSMRLTGLVSRSD
LIKPALQHFDDEHKRERFRPIVPANLRDPGARKAG
>Mature_595_residues
MNAPHKRDFSTNERLPRIALLAAVIGLLSTLAAFVLLSLIHLFTNLFFFQQFSFADRSPAGNTLGAWVIVVPVIGALVVG
LMARFGSEKIRGHGIPEAIEAILFGKSRMSPKVAVLKPLSSGIVIGSGGPFGAEGPIIMTGGALGSLIAQCVHVTAAERK
TLLVAGAAAGMTAVFGTPVAAVLLAVELLLFEWRPRSFLPVALACAVAGFARALFFGVEPLFPLTTAAPSPVALLSCLVA
GLLSGVLACGLSAALYRVEDTFAKLPVHWMWWPALGAIVIGVGGWLEPRALGVGYDVIGDLLHQHIALQIALALLVVKAV
MWVIALGSGTSGGVLAPLLMLGAGLGTVLSPVLPGGDPALWPLVCMAATLGATLGAPLTAIVFAFGLTHDANALLPLLAA
TLVAHGFATVVMKRSIMTEKIARRGYHIYREYGVDPLERHDVGEVMTPVDALVAIDGTATLEAVAAQFFGAQQTHRAYPV
VQNGRLLGVVDRAFVDAQRAQRTPDTSIATALADRAPAIALAHETCRLVASRLAMLGLERLPVVDDPQSMRLTGLVSRSD
LIKPALQHFDDEHKRERFRPIVPANLRDPGARKAG

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 62533; Mature: 62533

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPHKRDFSTNERLPRIALLAAVIGLLSTLAAFVLLSLIHLFTNLFFFQQFSFADRSPA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GNTLGAWVIVVPVIGALVVGLMARFGSEKIRGHGIPEAIEAILFGKSRMSPKVAVLKPLS
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHCCCCCCCCCEEECCCC
SGIVIGSGGPFGAEGPIIMTGGALGSLIAQCVHVTAAERKTLLVAGAAAGMTAVFGTPVA
CCEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEEECHHCHHHHHHHHHH
AVLLAVELLLFEWRPRSFLPVALACAVAGFARALFFGVEPLFPLTTAAPSPVALLSCLVA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
GLLSGVLACGLSAALYRVEDTFAKLPVHWMWWPALGAIVIGVGGWLEPRALGVGYDVIGD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCCHHHCCCHHHHHH
LLHQHIALQIALALLVVKAVMWVIALGSGTSGGVLAPLLMLGAGLGTVLSPVLPGGDPAL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCHH
WPLVCMAATLGATLGAPLTAIVFAFGLTHDANALLPLLAATLVAHGFATVVMKRSIMTEK
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IARRGYHIYREYGVDPLERHDVGEVMTPVDALVAIDGTATLEAVAAQFFGAQQTHRAYPV
HHHCCHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHCCCCCE
VQNGRLLGVVDRAFVDAQRAQRTPDTSIATALADRAPAIALAHETCRLVASRLAMLGLER
EECCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
LPVVDDPQSMRLTGLVSRSDLIKPALQHFDDEHKRERFRPIVPANLRDPGARKAG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNAPHKRDFSTNERLPRIALLAAVIGLLSTLAAFVLLSLIHLFTNLFFFQQFSFADRSPA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GNTLGAWVIVVPVIGALVVGLMARFGSEKIRGHGIPEAIEAILFGKSRMSPKVAVLKPLS
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHCCCCCCCCCEEECCCC
SGIVIGSGGPFGAEGPIIMTGGALGSLIAQCVHVTAAERKTLLVAGAAAGMTAVFGTPVA
CCEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEEECHHCHHHHHHHHHH
AVLLAVELLLFEWRPRSFLPVALACAVAGFARALFFGVEPLFPLTTAAPSPVALLSCLVA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
GLLSGVLACGLSAALYRVEDTFAKLPVHWMWWPALGAIVIGVGGWLEPRALGVGYDVIGD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCCHHHCCCHHHHHH
LLHQHIALQIALALLVVKAVMWVIALGSGTSGGVLAPLLMLGAGLGTVLSPVLPGGDPAL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCHH
WPLVCMAATLGATLGAPLTAIVFAFGLTHDANALLPLLAATLVAHGFATVVMKRSIMTEK
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IARRGYHIYREYGVDPLERHDVGEVMTPVDALVAIDGTATLEAVAAQFFGAQQTHRAYPV
HHHCCHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHCCCCCE
VQNGRLLGVVDRAFVDAQRAQRTPDTSIATALADRAPAIALAHETCRLVASRLAMLGLER
EECCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
LPVVDDPQSMRLTGLVSRSDLIKPALQHFDDEHKRERFRPIVPANLRDPGARKAG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]