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The map label for this gene is xerC [H]

Identifier: 189353108

GI number: 189353108

Start: 1290552

End: 1291745

Strand: Direct

Name: xerC [H]

Synonym: BMULJ_04344

Alternate gene names: 189353108

Gene position: 1290552-1291745 (Clockwise)

Preceding gene: 189353106

Following gene: 189353109

Centisome position: 52.18

GC content: 71.44

Gene sequence:

>1194_bases
ATGACTTCACCCGTTCCGCCCGACCGTGCGCTGCGCCCGCTGCCGATCGACACGCTGACCGTGCCGGCCGCGCTCGAGGG
GCGCACCGGCACGAACCGCGCGACGGGCGCGCGTGCGCAGATTGCGGCGACGAACGATCTCGACGCGGTGCGCGCGTGGC
TTGCGCGTTTCGTCGATACGCCGACGACCTTCCAGAACTATCGCAAGGAAGCCGAACGCCTGCTGCTGTGGGCCGTGATC
GCATGCGGCAAGCCGCTGTCGTCGCTGACGCACGAGGATCTCGTCGTGTATCGGCAGTTTCTGCTCGCGCCCGCGCCGGC
CGACGTCTGGTGCGCGAACGGCGGCCGCAAGCATCCGCGTGGCGACCCGCGCTGGCGCCCGTTCTACGGACCGCTGTCGG
CGGCGAGCCAGCGTCAGGCGATGGTGATCCTGAACGCGATGTTCTCGTGGCTCGTGCAGGCCGGCTACCTGGCCGGCAAT
CCGCTCGCGCTGTCGCGACAACGGCAGCGTCGCCCCGCGCCGCGCATCACGCGCCATCTTGGGCCGCCGCTCTGGCAGGC
GGTGAAGGACGCGATCGCCGCGCTACCGCGCGACGATGCGCGCGCGTCGTTCCATGCGGATCGCGCGCGCTGGGTCTTCA
CGCTGCTGTATCTCGGCGGGCTGCGCATCACTGAAGCCGCCGAGACGACGATGGGCCGGTTCTTCTGCCGGCGCGATGCG
AGCGGACGCGATCGCTGGTGGCTCGACGTGACGGGCAAAGGCGGTCGCCGCCGGCTCGTGCCGGCGACCGACGAACTGAT
GACGGAGCTCGCGCGCTACCGGCGCGCGCACGGTCTCGCACCGCTGCCCGTCGCCGACGAGGACACGCCGCTCGTGCTGC
CGTTCGGCCAGGCGCGCCGGCCGCTCACGCGCGCGGCGCTGCACCGCATCGTCAAGCAGGTGTTCCGGCACGCGGCCGAG
CGCCTGCGCGCGCAAGGCGACGCCGGCGCCGAACAAGCGCGCGTGCTCGAACAGGCGTCGGCCCACTGGCTGCGTCACAG
CGCCGGCTCGCACATGGCGGACGGACGCGTCGACCTGCGGCTCGTGCGCGACAACCTCGGCCACGTGTCGCTGACGACGA
CGAGCCAATACCTGCACGCGGACGACGACTGGCGACATCGCGAAACCGAGGAAAAACACCGCATCGACTGGTAG

Upstream 100 bases:

>100_bases
CCGTCCGATGACGATGGCGATCGCGATTGCGATTGCGATTGCGATTGCGATTGCGATCGCAATGTTCGCCGCTTCATCCG
CCGCGCCCTCATCGCTTCAC

Downstream 100 bases:

>100_bases
GCGGCGCGTGCCGCGCGACTGTCACATCGCGGCAAAACTGTGCGCCGACAATGCGCGTCACCGGGATCCCGCTCGTTTCC
GGCTCGTGCTCCGGCCGCGC

Product: integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MTSPVPPDRALRPLPIDTLTVPAALEGRTGTNRATGARAQIAATNDLDAVRAWLARFVDTPTTFQNYRKEAERLLLWAVI
ACGKPLSSLTHEDLVVYRQFLLAPAPADVWCANGGRKHPRGDPRWRPFYGPLSAASQRQAMVILNAMFSWLVQAGYLAGN
PLALSRQRQRRPAPRITRHLGPPLWQAVKDAIAALPRDDARASFHADRARWVFTLLYLGGLRITEAAETTMGRFFCRRDA
SGRDRWWLDVTGKGGRRRLVPATDELMTELARYRRAHGLAPLPVADEDTPLVLPFGQARRPLTRAALHRIVKQVFRHAAE
RLRAQGDAGAEQARVLEQASAHWLRHSAGSHMADGRVDLRLVRDNLGHVSLTTTSQYLHADDDWRHRETEEKHRIDW

Sequences:

>Translated_397_residues
MTSPVPPDRALRPLPIDTLTVPAALEGRTGTNRATGARAQIAATNDLDAVRAWLARFVDTPTTFQNYRKEAERLLLWAVI
ACGKPLSSLTHEDLVVYRQFLLAPAPADVWCANGGRKHPRGDPRWRPFYGPLSAASQRQAMVILNAMFSWLVQAGYLAGN
PLALSRQRQRRPAPRITRHLGPPLWQAVKDAIAALPRDDARASFHADRARWVFTLLYLGGLRITEAAETTMGRFFCRRDA
SGRDRWWLDVTGKGGRRRLVPATDELMTELARYRRAHGLAPLPVADEDTPLVLPFGQARRPLTRAALHRIVKQVFRHAAE
RLRAQGDAGAEQARVLEQASAHWLRHSAGSHMADGRVDLRLVRDNLGHVSLTTTSQYLHADDDWRHRETEEKHRIDW
>Mature_396_residues
TSPVPPDRALRPLPIDTLTVPAALEGRTGTNRATGARAQIAATNDLDAVRAWLARFVDTPTTFQNYRKEAERLLLWAVIA
CGKPLSSLTHEDLVVYRQFLLAPAPADVWCANGGRKHPRGDPRWRPFYGPLSAASQRQAMVILNAMFSWLVQAGYLAGNP
LALSRQRQRRPAPRITRHLGPPLWQAVKDAIAALPRDDARASFHADRARWVFTLLYLGGLRITEAAETTMGRFFCRRDAS
GRDRWWLDVTGKGGRRRLVPATDELMTELARYRRAHGLAPLPVADEDTPLVLPFGQARRPLTRAALHRIVKQVFRHAAER
LRAQGDAGAEQARVLEQASAHWLRHSAGSHMADGRVDLRLVRDNLGHVSLTTTSQYLHADDDWRHRETEEKHRIDW

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 44669; Mature: 44538

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPVPPDRALRPLPIDTLTVPAALEGRTGTNRATGARAQIAATNDLDAVRAWLARFVDT
CCCCCCCCCCCCCCCCCCEECCCEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCC
PTTFQNYRKEAERLLLWAVIACGKPLSSLTHEDLVVYRQFLLAPAPADVWCANGGRKHPR
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCC
GDPRWRPFYGPLSAASQRQAMVILNAMFSWLVQAGYLAGNPLALSRQRQRRPAPRITRHL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHCCCCHHHHHHC
GPPLWQAVKDAIAALPRDDARASFHADRARWVFTLLYLGGLRITEAAETTMGRFFCRRDA
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
SGRDRWWLDVTGKGGRRRLVPATDELMTELARYRRAHGLAPLPVADEDTPLVLPFGQARR
CCCCEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHCC
PLTRAALHRIVKQVFRHAAERLRAQGDAGAEQARVLEQASAHWLRHSAGSHMADGRVDLR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
LVRDNLGHVSLTTTSQYLHADDDWRHRETEEKHRIDW
EEECCCCEEEEEECHHHCCCCCCHHHCCCHHHHCCCC
>Mature Secondary Structure 
TSPVPPDRALRPLPIDTLTVPAALEGRTGTNRATGARAQIAATNDLDAVRAWLARFVDT
CCCCCCCCCCCCCCCCCEECCCEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCC
PTTFQNYRKEAERLLLWAVIACGKPLSSLTHEDLVVYRQFLLAPAPADVWCANGGRKHPR
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCC
GDPRWRPFYGPLSAASQRQAMVILNAMFSWLVQAGYLAGNPLALSRQRQRRPAPRITRHL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHCCCCHHHHHHC
GPPLWQAVKDAIAALPRDDARASFHADRARWVFTLLYLGGLRITEAAETTMGRFFCRRDA
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
SGRDRWWLDVTGKGGRRRLVPATDELMTELARYRRAHGLAPLPVADEDTPLVLPFGQARR
CCCCEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHCC
PLTRAALHRIVKQVFRHAAERLRAQGDAGAEQARVLEQASAHWLRHSAGSHMADGRVDLR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
LVRDNLGHVSLTTTSQYLHADDDWRHRETEEKHRIDW
EEECCCCEEEEEECHHHCCCCCCHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA