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The map label for this gene is ocd

Identifier: 189353009

GI number: 189353009

Start: 1172385

End: 1173317

Strand: Reverse

Name: ocd

Synonym: BMULJ_04243

Alternate gene names: NA

Gene position: 1173317-1172385 (Counterclockwise)

Preceding gene: 189353016

Following gene: 189353008

Centisome position: 47.44

GC content: 72.88

Gene sequence:

>933_bases
ATGACCGCTCTCTCCCGGACTCCCGTTTTCGACGCCGCCGATACGGCCGCGCTGCTCGACTACCCGGCGCTGCTCGCCAC
GCTGGCCCGCACCGTCGCCGACTACGCGGCCGGCGAGATCGTCAGCCCCGAGCGGCTCGTCGTGCCGCTGCAGGCCGGCG
GCGTGATGCTGTCGATGCCGTCCAGCGCGCACGATCTCGCGATCCACAAGCTCGTCAACGTGTGTCCCGGCAATGCGGCG
CGCGGGCTGCCGACGATCCTCGGCCAGGTGATCGCATGCGATGCGACGACGGGCGAGATGCGCTTCGTGCTCGACGGCCC
GACCGTCACCGGTCGCCGCACGGCGGCCGTCACCGCACTCGGCGTCCAGGCGCTGCACGGCACGCCGCGCGAGATCCTGC
TGATCGGCACGGGCAAGCAGGCCGCGAATCACGCGGAGGCGTTCACGGCGCTCTTTCCCGACGCGCGGCTGCACGTGCGC
GGTTCGCGGGCCGCGAGCGCGGCCGAATTCTGCGCGGCACATCGCGCGCACGCGCCGCAGCTCATGCCGCTCGACGGCGA
TGCAATTCCCGATGCGATCGACGTCGTCGTCACGCTGACGACGAGCCGCACGCCCGTTTATCGCGACGCGGCGCGCGAAG
GCCGGCTCGTGGTCGGCGTCGGCGCGTTCACGGCGGATGCGGCCGAAATCGCGGCGGACACCGTGCGGCGCAGCCGGCTC
GTCGTCGACGACCCGGCCGGCGCGCGCCATGAAGCGGGCGACCTGATCGTCGCGAACGTCGACTGGCAGCAGGTCGCCTC
GCTCGCCGACGTGCTGAACGGCACGTTCGCGCGCGGCGGCCCGATGCTGTTCAAGACGGTCGGCTGCGCGGCATGGGATC
TCGCCGCGTGCCGCACGGCGCGCGATGCGCTCGCCGCGCGCGAGCAGCGTTGA

Upstream 100 bases:

>100_bases
CGGCAAACTGGTATAAATTCGATCCAGCCTGCCACGTGTCGCGGTATCCGGCAGCCCGTCGCGCGCACCGCGCGCTCGTC
CACGCTCACCGACGCCTACG

Downstream 100 bases:

>100_bases
ACGTCCCGCAACACTGAGCTGCCGACGCGGCGCCGAGCCGCGCCCGCGGCGCGCAGCATGCGGTACCCGCTGCGCGCACG
CGTTCGTTGCGCCGCACCCG

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: Ornithine Cyclodeaminase/Mu-Crystallin; Ornithine Cyclodeaminase/Mu-Crystallin Family Protein

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MTALSRTPVFDAADTAALLDYPALLATLARTVADYAAGEIVSPERLVVPLQAGGVMLSMPSSAHDLAIHKLVNVCPGNAA
RGLPTILGQVIACDATTGEMRFVLDGPTVTGRRTAAVTALGVQALHGTPREILLIGTGKQAANHAEAFTALFPDARLHVR
GSRAASAAEFCAAHRAHAPQLMPLDGDAIPDAIDVVVTLTTSRTPVYRDAAREGRLVVGVGAFTADAAEIAADTVRRSRL
VVDDPAGARHEAGDLIVANVDWQQVASLADVLNGTFARGGPMLFKTVGCAAWDLAACRTARDALAAREQR

Sequences:

>Translated_310_residues
MTALSRTPVFDAADTAALLDYPALLATLARTVADYAAGEIVSPERLVVPLQAGGVMLSMPSSAHDLAIHKLVNVCPGNAA
RGLPTILGQVIACDATTGEMRFVLDGPTVTGRRTAAVTALGVQALHGTPREILLIGTGKQAANHAEAFTALFPDARLHVR
GSRAASAAEFCAAHRAHAPQLMPLDGDAIPDAIDVVVTLTTSRTPVYRDAAREGRLVVGVGAFTADAAEIAADTVRRSRL
VVDDPAGARHEAGDLIVANVDWQQVASLADVLNGTFARGGPMLFKTVGCAAWDLAACRTARDALAAREQR
>Mature_309_residues
TALSRTPVFDAADTAALLDYPALLATLARTVADYAAGEIVSPERLVVPLQAGGVMLSMPSSAHDLAIHKLVNVCPGNAAR
GLPTILGQVIACDATTGEMRFVLDGPTVTGRRTAAVTALGVQALHGTPREILLIGTGKQAANHAEAFTALFPDARLHVRG
SRAASAAEFCAAHRAHAPQLMPLDGDAIPDAIDVVVTLTTSRTPVYRDAAREGRLVVGVGAFTADAAEIAADTVRRSRLV
VDDPAGARHEAGDLIVANVDWQQVASLADVLNGTFARGGPMLFKTVGCAAWDLAACRTARDALAAREQR

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503065, Length=316, Percent_Identity=26.5822784810127, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI62241008, Length=277, Percent_Identity=26.3537906137184, Blast_Score=78, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32236; Mature: 32105

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALSRTPVFDAADTAALLDYPALLATLARTVADYAAGEIVSPERLVVPLQAGGVMLSMP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEECC
SSAHDLAIHKLVNVCPGNAARGLPTILGQVIACDATTGEMRFVLDGPTVTGRRTAAVTAL
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEECCCCCCEEEEECCCCCCCCCHHHHHHH
GVQALHGTPREILLIGTGKQAANHAEAFTALFPDARLHVRGSRAASAAEFCAAHRAHAPQ
HHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCC
LMPLDGDAIPDAIDVVVTLTTSRTPVYRDAAREGRLVVGVGAFTADAAEIAADTVRRSRL
EECCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCEE
VVDDPAGARHEAGDLIVANVDWQQVASLADVLNGTFARGGPMLFKTVGCAAWDLAACRTA
EEECCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHCHHHHHHHHHHHH
RDALAAREQR
HHHHHHHCCC
>Mature Secondary Structure 
TALSRTPVFDAADTAALLDYPALLATLARTVADYAAGEIVSPERLVVPLQAGGVMLSMP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEECC
SSAHDLAIHKLVNVCPGNAARGLPTILGQVIACDATTGEMRFVLDGPTVTGRRTAAVTAL
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEECCCCCCEEEEECCCCCCCCCHHHHHHH
GVQALHGTPREILLIGTGKQAANHAEAFTALFPDARLHVRGSRAASAAEFCAAHRAHAPQ
HHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCC
LMPLDGDAIPDAIDVVVTLTTSRTPVYRDAAREGRLVVGVGAFTADAAEIAADTVRRSRL
EECCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCEE
VVDDPAGARHEAGDLIVANVDWQQVASLADVLNGTFARGGPMLFKTVGCAAWDLAACRTA
EEECCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHCHHHHHHHHHHHH
RDALAAREQR
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA