Click here to switch to the map view.

The map label for this gene is ttuB [H]

Identifier: 189352970

GI number: 189352970

Start: 1129523

End: 1130872

Strand: Direct

Name: ttuB [H]

Synonym: BMULJ_04204

Alternate gene names: 189352970

Gene position: 1129523-1130872 (Clockwise)

Preceding gene: 189352969

Following gene: 189352971

Centisome position: 45.67

GC content: 69.19

Gene sequence:

>1350_bases
ATGTCCCGATCGCTTCCCGCCGAAGCGACGCTCGCGCACGCGAGCGCGCCGGCTTCCGCGTCCGCCGACGCGCAGCTGTT
CCGCAAGATCGCATCGCGGATCGTGCCGTTCCTGTTCCTCTGCTACGTCGTATCGTTCCTCGACCGCATCAACATCGGCT
TCGCGCAGCTGCAGATGAAGCACGACCTCGGCTTCAGCGATGCGATGTACGGCCTCGGCGCGGCCGTGTTCTACATCGGC
TACGTCTGCTGCGAGGTGCCGAGCAACATGCTGCTCGCGCGCTTCGGCGCGCGCCGCACGTTCACGCGGATCATGCTGCT
GTGGGGCATCGCGTCGACGGGCATGATGTTCGTGTCGCAGCCGTCGCATTTCTACGTGCTGCGCTTTTTGCTCGGCGTGT
TCGAAGCCGGGTTCTTTCCCGGCATCGTGCTGTACCTGACTTACTGGTTTCCCGCGAACCGCCGCGCGGCCGCGATCTCG
GTGTTCTTCGCGGGCGTCGCGGTCGCCGGCGTGCTCGGCGGCCTCGTGTCCGGCTGGATCATGCGCGACATGAGCGGCGT
GCTCGGGCTGCACGGCTGGCAGTGGATGTTCGCGATCGAGGGCGCACCGGCGATCCTGCTCGCGTTCGTCGCGTTCGCCT
GTCTCGTCGATCGGCCGCAGGACGCGGCGTGGCTCAGTGCCGAGGAAAAGGCGCGCGTCGCCGCGCTGTGCGCGGACGGC
AGCGCGCACGGCGCCGCATCGCACGGGCACAGCGCGCGCAGCGTCGCGGCCGCGCTCGCGAACCCGCGCGTGTATCTGTT
CGCGTTCATCTATTTCTCGCTGACCTGCGCATCGCTGACGCTGAACTTCTGGATGCCGCTGATGATTCGCGACTTCGGCG
TGACCGACGTCGTCGCGGTGAGCCTGTACACCGTCGTGCCGAATGCGGTCGGCGCGGTCGGGCTGATCCTGATCGCGCGC
CGCTCCGATCGCACCGGCGAGCGGCGCCGGCACTTCGCGGTCTGCACGATCGGCGGCGGCCTCGCGCTCGCCGCGCTGAC
GCTGCATCTGCCCAGCTTCGTCGCGATGCTCGCGTGCCTGTCGATCGCGGCGACGCTGATCTTCGCCGCGCTGCCGATCT
TCTGGGCCGTGCCGACGCGCTATCTGTCCGGCCACGCGGCCGCGGCCGGCATCGCGCTGATCAGCAGCATCGGGATCACG
AGCGGCATCGTCAGCCCGTGGGTGATCGGGCTGATCCGCACGCGCACGGGCAGCATGGATCTCGCCGTCTACCTGCTCGC
CGCGCTGCTCGCGGTGAGCGGCGCCGCGCTGATGCTCGGCGTGAAGGACGAGCCGGCGCCGCACGCGTGA

Upstream 100 bases:

>100_bases
GCCTGACCCGCTCTCATAGAAAGCAGGGCGCACGAACGCCCTCGGGAGAGCGCTGCGCGCGTGAAACGCGCAGTCCGTTC
GAAGAGTTTGGAGAGAGACA

Downstream 100 bases:

>100_bases
GCCACCGCCGGCCGCGGCTCGACGGGCCGCCGCGGCCGGCGCTTCGCGTTCGCGCCCGTCCGTCCGTTCATCCGTTCATC
CGTTCGTCGAGGAGACACAC

Product: permease of the major facilitator superfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 448

Protein sequence:

>449_residues
MSRSLPAEATLAHASAPASASADAQLFRKIASRIVPFLFLCYVVSFLDRINIGFAQLQMKHDLGFSDAMYGLGAAVFYIG
YVCCEVPSNMLLARFGARRTFTRIMLLWGIASTGMMFVSQPSHFYVLRFLLGVFEAGFFPGIVLYLTYWFPANRRAAAIS
VFFAGVAVAGVLGGLVSGWIMRDMSGVLGLHGWQWMFAIEGAPAILLAFVAFACLVDRPQDAAWLSAEEKARVAALCADG
SAHGAASHGHSARSVAAALANPRVYLFAFIYFSLTCASLTLNFWMPLMIRDFGVTDVVAVSLYTVVPNAVGAVGLILIAR
RSDRTGERRRHFAVCTIGGGLALAALTLHLPSFVAMLACLSIAATLIFAALPIFWAVPTRYLSGHAAAAGIALISSIGIT
SGIVSPWVIGLIRTRTGSMDLAVYLLAALLAVSGAALMLGVKDEPAPHA

Sequences:

>Translated_449_residues
MSRSLPAEATLAHASAPASASADAQLFRKIASRIVPFLFLCYVVSFLDRINIGFAQLQMKHDLGFSDAMYGLGAAVFYIG
YVCCEVPSNMLLARFGARRTFTRIMLLWGIASTGMMFVSQPSHFYVLRFLLGVFEAGFFPGIVLYLTYWFPANRRAAAIS
VFFAGVAVAGVLGGLVSGWIMRDMSGVLGLHGWQWMFAIEGAPAILLAFVAFACLVDRPQDAAWLSAEEKARVAALCADG
SAHGAASHGHSARSVAAALANPRVYLFAFIYFSLTCASLTLNFWMPLMIRDFGVTDVVAVSLYTVVPNAVGAVGLILIAR
RSDRTGERRRHFAVCTIGGGLALAALTLHLPSFVAMLACLSIAATLIFAALPIFWAVPTRYLSGHAAAAGIALISSIGIT
SGIVSPWVIGLIRTRTGSMDLAVYLLAALLAVSGAALMLGVKDEPAPHA
>Mature_448_residues
SRSLPAEATLAHASAPASASADAQLFRKIASRIVPFLFLCYVVSFLDRINIGFAQLQMKHDLGFSDAMYGLGAAVFYIGY
VCCEVPSNMLLARFGARRTFTRIMLLWGIASTGMMFVSQPSHFYVLRFLLGVFEAGFFPGIVLYLTYWFPANRRAAAISV
FFAGVAVAGVLGGLVSGWIMRDMSGVLGLHGWQWMFAIEGAPAILLAFVAFACLVDRPQDAAWLSAEEKARVAALCADGS
AHGAASHGHSARSVAAALANPRVYLFAFIYFSLTCASLTLNFWMPLMIRDFGVTDVVAVSLYTVVPNAVGAVGLILIARR
SDRTGERRRHFAVCTIGGGLALAALTLHLPSFVAMLACLSIAATLIFAALPIFWAVPTRYLSGHAAAAGIALISSIGITS
GIVSPWVIGLIRTRTGSMDLAVYLLAALLAVSGAALMLGVKDEPAPHA

Specific function: Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI87082071, Length=419, Percent_Identity=34.3675417661098, Blast_Score=224, Evalue=9e-60,
Organism=Escherichia coli, GI1789152, Length=466, Percent_Identity=24.2489270386266, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI87082320, Length=311, Percent_Identity=24.7588424437299, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1789515, Length=440, Percent_Identity=24.0909090909091, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI2367379, Length=336, Percent_Identity=24.702380952381, Blast_Score=70, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6322025, Length=243, Percent_Identity=26.3374485596708, Blast_Score=98, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6321698, Length=418, Percent_Identity=24.8803827751196, Blast_Score=87, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6319876, Length=221, Percent_Identity=25.7918552036199, Blast_Score=81, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6322612, Length=287, Percent_Identity=24.7386759581882, Blast_Score=70, Evalue=7e-13,
Organism=Saccharomyces cerevisiae, GI6319250, Length=187, Percent_Identity=26.2032085561497, Blast_Score=67, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6321502, Length=191, Percent_Identity=25.6544502617801, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6324410, Length=152, Percent_Identity=25.6578947368421, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323032, Length=232, Percent_Identity=25, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24584153, Length=182, Percent_Identity=28.021978021978, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47783; Mature: 47652

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSLPAEATLAHASAPASASADAQLFRKIASRIVPFLFLCYVVSFLDRINIGFAQLQMK
CCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEH
HDLGFSDAMYGLGAAVFYIGYVCCEVPSNMLLARFGARRTFTRIMLLWGIASTGMMFVSQ
HCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEC
PSHFYVLRFLLGVFEAGFFPGIVLYLTYWFPANRRAAAISVFFAGVAVAGVLGGLVSGWI
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MRDMSGVLGLHGWQWMFAIEGAPAILLAFVAFACLVDRPQDAAWLSAEEKARVAALCADG
HHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHEEEEECCC
SAHGAASHGHSARSVAAALANPRVYLFAFIYFSLTCASLTLNFWMPLMIRDFGVTDVVAV
CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SLYTVVPNAVGAVGLILIARRSDRTGERRRHFAVCTIGGGLALAALTLHLPSFVAMLACL
HHHHHHHHHHHHHHHHHEEECCCCCCCHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHH
SIAATLIFAALPIFWAVPTRYLSGHAAAAGIALISSIGITSGIVSPWVIGLIRTRTGSMD
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHH
LAVYLLAALLAVSGAALMLGVKDEPAPHA
HHHHHHHHHHHHCCCEEEEECCCCCCCCC
>Mature Secondary Structure 
SRSLPAEATLAHASAPASASADAQLFRKIASRIVPFLFLCYVVSFLDRINIGFAQLQMK
CCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEH
HDLGFSDAMYGLGAAVFYIGYVCCEVPSNMLLARFGARRTFTRIMLLWGIASTGMMFVSQ
HCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEC
PSHFYVLRFLLGVFEAGFFPGIVLYLTYWFPANRRAAAISVFFAGVAVAGVLGGLVSGWI
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MRDMSGVLGLHGWQWMFAIEGAPAILLAFVAFACLVDRPQDAAWLSAEEKARVAALCADG
HHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHEEEEECCC
SAHGAASHGHSARSVAAALANPRVYLFAFIYFSLTCASLTLNFWMPLMIRDFGVTDVVAV
CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SLYTVVPNAVGAVGLILIARRSDRTGERRRHFAVCTIGGGLALAALTLHLPSFVAMLACL
HHHHHHHHHHHHHHHHHEEECCCCCCCHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHH
SIAATLIFAALPIFWAVPTRYLSGHAAAAGIALISSIGITSGIVSPWVIGLIRTRTGSMD
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHH
LAVYLLAALLAVSGAALMLGVKDEPAPHA
HHHHHHHHHHHHCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8672817 [H]