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The map label for this gene is dppA [H]

Identifier: 189352853

GI number: 189352853

Start: 979399

End: 980226

Strand: Direct

Name: dppA [H]

Synonym: BMULJ_04087

Alternate gene names: 189352853

Gene position: 979399-980226 (Clockwise)

Preceding gene: 189352852

Following gene: 189352856

Centisome position: 39.6

GC content: 69.57

Gene sequence:

>828_bases
ATGAAGATCCTGATCTCGACCGATATCGAAGGCGTCGCCGGCGTGTTTGCCGTCGAGCAGACGCGCGCCGGCAATCCCGA
GTACGAACGGGCGCGGCGCTGGATGACCGCCGAAGCGAATGCGGCGATCGAAGGCGCGTTCGCGGGCGGCGCGCAGTCCG
TGTGGGTCAACGACTCGCACGGCGGTTTTCGCAACCTGCTGCCGGACGCGCTCGACGCCCGCGCGCGCGTCGTGCTCGGC
AAACCGCGCACGCTCGGGATGATGGCGGGCCTCGAACGGCAGCCGGACCTCGTGTTCATGATCGGCTATCACGCGAAGTC
GCAGACGCGCGGCGTGCTCGCGCACACGATCAACACCTTCGCCTTTACGCAGGTCTGGCTGAACGGCGTCGAGCTCGGCG
AGGCGGGGCTCTATGGCGCGCTCGCGCGCGAATACGGCGCGCACGTCGTGCTCGCGTCCGGCGACGACGTGTTCGCCGAA
GAAACGCAGCCGCTGTTTCCCGATGCCCGTTTCGAGACCGTGAAGACGGCCGGCGGCGCATCGAGCGGCGACACGCTGAC
GCCGGCCGCCGCATGCGCGCGGATTGCGATCGCCGCGCGCGAAACGGTCGCGCGCGCGGTGTCGAGCGGATTGCGCGCCG
GCGCACATCGGCCCGCGCCGGCGCACTGCACGCTGCGCGTACAGACGCCTGCAATCGCCGACCTGTTCTGCGTGCTGCCG
TCGCTCGAGCGCGTCGATGCGGTGACGCTGCGTTTCGAGGGGCCGTCGGTCGAGCACGTGGTGCGCACGCTGAACAGCTT
GTCGGCGATGTCGTTCATGCTGCGCTGA

Upstream 100 bases:

>100_bases
TCACGGTCGTCGGCCGTGACGGGCACGTGCGGCGCGCGCTGCGCGACGCGGTGCCCGACCTCGATCGCCTGCTCAACGAA
GGACCGACCACCATTCAACG

Downstream 100 bases:

>100_bases
GGCGGCGCTGCCGCGGCTGCGGCAGCGGACAAAAAAACGCGCGTCTGCCGGATTCTGCAGCCGCGCTCAAAGGCACTCGG
TCGGCAAAAACGCCCGGCGG

Product: peptide/nickel transport system substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MKILISTDIEGVAGVFAVEQTRAGNPEYERARRWMTAEANAAIEGAFAGGAQSVWVNDSHGGFRNLLPDALDARARVVLG
KPRTLGMMAGLERQPDLVFMIGYHAKSQTRGVLAHTINTFAFTQVWLNGVELGEAGLYGALAREYGAHVVLASGDDVFAE
ETQPLFPDARFETVKTAGGASSGDTLTPAAACARIAIAARETVARAVSSGLRAGAHRPAPAHCTLRVQTPAIADLFCVLP
SLERVDAVTLRFEGPSVEHVVRTLNSLSAMSFMLR

Sequences:

>Translated_275_residues
MKILISTDIEGVAGVFAVEQTRAGNPEYERARRWMTAEANAAIEGAFAGGAQSVWVNDSHGGFRNLLPDALDARARVVLG
KPRTLGMMAGLERQPDLVFMIGYHAKSQTRGVLAHTINTFAFTQVWLNGVELGEAGLYGALAREYGAHVVLASGDDVFAE
ETQPLFPDARFETVKTAGGASSGDTLTPAAACARIAIAARETVARAVSSGLRAGAHRPAPAHCTLRVQTPAIADLFCVLP
SLERVDAVTLRFEGPSVEHVVRTLNSLSAMSFMLR
>Mature_275_residues
MKILISTDIEGVAGVFAVEQTRAGNPEYERARRWMTAEANAAIEGAFAGGAQSVWVNDSHGGFRNLLPDALDARARVVLG
KPRTLGMMAGLERQPDLVFMIGYHAKSQTRGVLAHTINTFAFTQVWLNGVELGEAGLYGALAREYGAHVVLASGDDVFAE
ETQPLFPDARFETVKTAGGASSGDTLTPAAACARIAIAARETVARAVSSGLRAGAHRPAPAHCTLRVQTPAIADLFCVLP
SLERVDAVTLRFEGPSVEHVVRTLNSLSAMSFMLR

Specific function: Hydrolyzes N-terminal residues in D-amino acid containing peptides. Among the tested substrates, the highest activities are with D-Ala-D-Ala and D-Ala-Gly-Gly. The physiological role is not clear [H]

COG id: COG2362

COG function: function code E; D-aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M55 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007035 [H]

Pfam domain/function: PF04951 Peptidase_M55 [H]

EC number: NA

Molecular weight: Translated: 29274; Mature: 29274

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILISTDIEGVAGVFAVEQTRAGNPEYERARRWMTAEANAAIEGAFAGGAQSVWVNDSH
CEEEEECCCCCHHHHEEEHHCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCC
GGFRNLLPDALDARARVVLGKPRTLGMMAGLERQPDLVFMIGYHAKSQTRGVLAHTINTF
CCHHHHCCHHHCCCEEEEECCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHH
AFTQVWLNGVELGEAGLYGALAREYGAHVVLASGDDVFAEETQPLFPDARFETVKTAGGA
HHHHHHHCCCEECCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHHEECCCCC
SSGDTLTPAAACARIAIAARETVARAVSSGLRAGAHRPAPAHCTLRVQTPAIADLFCVLP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHC
SLERVDAVTLRFEGPSVEHVVRTLNSLSAMSFMLR
CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKILISTDIEGVAGVFAVEQTRAGNPEYERARRWMTAEANAAIEGAFAGGAQSVWVNDSH
CEEEEECCCCCHHHHEEEHHCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCC
GGFRNLLPDALDARARVVLGKPRTLGMMAGLERQPDLVFMIGYHAKSQTRGVLAHTINTF
CCHHHHCCHHHCCCEEEEECCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHH
AFTQVWLNGVELGEAGLYGALAREYGAHVVLASGDDVFAEETQPLFPDARFETVKTAGGA
HHHHHHHCCCEECCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHHEECCCCC
SSGDTLTPAAACARIAIAARETVARAVSSGLRAGAHRPAPAHCTLRVQTPAIADLFCVLP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHC
SLERVDAVTLRFEGPSVEHVVRTLNSLSAMSFMLR
CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]