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The map label for this gene is leuD [H]

Identifier: 189352652

GI number: 189352652

Start: 740016

End: 740666

Strand: Direct

Name: leuD [H]

Synonym: BMULJ_03883

Alternate gene names: 189352652

Gene position: 740016-740666 (Clockwise)

Preceding gene: 189352651

Following gene: 189352653

Centisome position: 29.92

GC content: 62.98

Gene sequence:

>651_bases
ATGGAAAAATTCACAGTGCATACCGGCGTCGTGGCGCCGCTCGATCGCGAGAACGTCGACACCGACGCGATCATTCCGAA
GCAGTTCCTGAAGTCGATCAAGCGCACGGGCTTCGGTCCGAACGCGTTCGACGAGTGGCGCTATCTTGACCACGGCGAGC
CGGGCCAGGACAACTCGAAGCGTCCGCTGAACCCGGACTTCGTGCTGAACCAGCCGCGCTACCAGGGCGCGTCGATTCTC
GTCACGCGCAAGAACTTCGGCTGCGGCAGCTCGCGCGAGCACGCGCCGTGGGCGCTGCAGCAGTACGGCTTCCGCGCGAT
CATCGCGCCGAGCTTCGCGGACATCTTCTTCAACAACTGCTTCAAGAACGGGCTGCTGCCGATCGTGCTGACCGAGCAGC
AGGTCGATCATCTGATCAACGAGACGGTCGCGTTCAACGGCTATCAGCTGACGATCGATCTCGAGGCGCAGGTCGTGCGC
ACGCCGGACGGCCGCGACTATCCGTTCGAGATCACCGCGTTCCGCAAGTACTGCCTGCTGAACGGTTTCGACGACATCGG
CCTCACGCTGCGTCACGCGGACAAGATCCGCCAGTTCGAAGCGGAGCGGCTCGCGAAGCAGCCGTGGCTCAACAACAAGC
TGGTCGGCTGA

Upstream 100 bases:

>100_bases
GCCGCCGGCAGCGCACTGAAGCGCGCCGCGGAGTGACCCCGCCGAGAATTTGTCGATGTGCGCCGGCCGCGGGCCGGCCC
TTCAACCGGATAGACGGATC

Downstream 100 bases:

>100_bases
AGTCGTCCTTCGGGCGGGCGCGCACGCCGCGCGTTCGCCCGCCAGCCATCACCCCTTATTCAGTCAGGAACAACGCATGA
AGATTGCAGTGCTGCCGGGC

Product: isopropylmalate isomerase small subunit

Products: NA

Alternate protein names: Alpha-IPM isomerase; IPMI; Isopropylmalate isomerase [H]

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MEKFTVHTGVVAPLDRENVDTDAIIPKQFLKSIKRTGFGPNAFDEWRYLDHGEPGQDNSKRPLNPDFVLNQPRYQGASIL
VTRKNFGCGSSREHAPWALQQYGFRAIIAPSFADIFFNNCFKNGLLPIVLTEQQVDHLINETVAFNGYQLTIDLEAQVVR
TPDGRDYPFEITAFRKYCLLNGFDDIGLTLRHADKIRQFEAERLAKQPWLNNKLVG

Sequences:

>Translated_216_residues
MEKFTVHTGVVAPLDRENVDTDAIIPKQFLKSIKRTGFGPNAFDEWRYLDHGEPGQDNSKRPLNPDFVLNQPRYQGASIL
VTRKNFGCGSSREHAPWALQQYGFRAIIAPSFADIFFNNCFKNGLLPIVLTEQQVDHLINETVAFNGYQLTIDLEAQVVR
TPDGRDYPFEITAFRKYCLLNGFDDIGLTLRHADKIRQFEAERLAKQPWLNNKLVG
>Mature_216_residues
MEKFTVHTGVVAPLDRENVDTDAIIPKQFLKSIKRTGFGPNAFDEWRYLDHGEPGQDNSKRPLNPDFVLNQPRYQGASIL
VTRKNFGCGSSREHAPWALQQYGFRAIIAPSFADIFFNNCFKNGLLPIVLTEQQVDHLINETVAFNGYQLTIDLEAQVVR
TPDGRDYPFEITAFRKYCLLNGFDDIGLTLRHADKIRQFEAERLAKQPWLNNKLVG

Specific function: Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate [H]

COG id: COG0066

COG function: function code E; 3-isopropylmalate dehydratase small subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leuD family. LeuD type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786258, Length=211, Percent_Identity=57.8199052132701, Blast_Score=238, Evalue=2e-64,
Organism=Saccharomyces cerevisiae, GI6321429, Length=215, Percent_Identity=51.6279069767442, Blast_Score=199, Evalue=3e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004431
- InterPro:   IPR012305
- InterPro:   IPR015937
- InterPro:   IPR015928
- InterPro:   IPR000573 [H]

Pfam domain/function: PF00694 Aconitase_C [H]

EC number: =4.2.1.33 [H]

Molecular weight: Translated: 24658; Mature: 24658

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKFTVHTGVVAPLDRENVDTDAIIPKQFLKSIKRTGFGPNAFDEWRYLDHGEPGQDNSK
CCCEEEECCEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCC
RPLNPDFVLNQPRYQGASILVTRKNFGCGSSREHAPWALQQYGFRAIIAPSFADIFFNNC
CCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCEEEECCHHHHHHHHHH
FKNGLLPIVLTEQQVDHLINETVAFNGYQLTIDLEAQVVRTPDGRDYPFEITAFRKYCLL
HHCCCEEEEECHHHHHHHHHHHEECCCEEEEEEEEEEEEECCCCCCCCEEHHHHHHHHHH
NGFDDIGLTLRHADKIRQFEAERLAKQPWLNNKLVG
CCCCHHCEEHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEKFTVHTGVVAPLDRENVDTDAIIPKQFLKSIKRTGFGPNAFDEWRYLDHGEPGQDNSK
CCCEEEECCEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCC
RPLNPDFVLNQPRYQGASILVTRKNFGCGSSREHAPWALQQYGFRAIIAPSFADIFFNNC
CCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCEEEECCHHHHHHHHHH
FKNGLLPIVLTEQQVDHLINETVAFNGYQLTIDLEAQVVRTPDGRDYPFEITAFRKYCLL
HHCCCEEEEECHHHHHHHHHHHEECCCEEEEEEEEEEEEECCCCCCCCEEHHHHHHHHHH
NGFDDIGLTLRHADKIRQFEAERLAKQPWLNNKLVG
CCCCHHCEEHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA