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The map label for this gene is ybiO [H]

Identifier: 189352603

GI number: 189352603

Start: 684983

End: 687475

Strand: Reverse

Name: ybiO [H]

Synonym: BMULJ_03834

Alternate gene names: 189352603

Gene position: 687475-684983 (Counterclockwise)

Preceding gene: 189352604

Following gene: 189352601

Centisome position: 27.8

GC content: 70.88

Gene sequence:

>2493_bases
ATGCGACATTTGCTCCTCGGCTGGCTGCTCGCCGCCTTCGTCACGGCCGTACAGGCGGCCACGCCCGCTCCCGCCGCCGC
CTCGGCGGCATCTTCCGCCGAACCGGCGCTGACTCCACAGCAGGCGCGCCAGGCGCTCGCGGTGCTCGAGAGTCCGCGCG
AACGCGAACAGGTCGAAACGACACTGCGCGCGATCGCCGCGGTCGGCGTACTCAGTGCACCGGCCGTACCGGCCAGCGCA
GCGGCGCCGGCGAGCGGCGCGTCGTCGGCGGCCGCACCGGCCGCGCTGACATCGAACGGCCTTGCGTCGATGCTCGTGCG
GCAGGGTTCGCGCTGGGCCGTCGACATCGGCAACGCGCTGCGCGACTCGCTGCGCTCGCTGCTCGAGGTCGGATCGGTCG
GCCGCTGGTGGCAGGACACGCTCGGGCGCACCGACGCGCGCACCGATCTCGCACGCTCGCTAGGGCTGATCGTCGCGGTG
CTCGTCCCGGCGCTCGTCGGCGAATGGCTCGTGCGGCGGCTGCTGCGCCGTGCGCTCGCCGGGCTGGCCGCACGCCGCGC
CGGTGCGCCGCGCGATACAGCGTCGGACGACGATGCGCGCGCCGACGACGCAGCGCCGCCGCACGACACGCCGCCCCCCG
ATGCATCGGACGCCACGCAGTCGTCGTCGCGCGGGCGCGGGCACGCGCGCCGTCACACGACGCTGCTGCACCGGATGCCG
CGCGCGATCGTGAGTCTCTTGCTGCGCTCGGTGCCGCTGCTCGTGTTCGTCGGCATCGCCGGGCTGATGATGTCGTTCGT
CACCGACGACGGCACACCGGTCGAGGCCGCACTCGGCGCGCTGATCGACATCTACGTGATCGGCCGGCTCGTGACGATCG
TGAGCCGCCTGTTCTTCCAGCCCGACGCGCATCAACTGCGGCTGCTGCACATCAGCGATGCGTGGGCCGCTTTCGCGCAG
CGCTCGATCGCGCGGATCGTGATCGTCGTGGGCGCCTGCACGGCCGCGGTCGAGATCGCCGCGAACCTGGGGCTCACCGA
AGCGGGTCACGTCGCGCTGCAGAAGGCCGTCGCGCTCGTCGCGCACGTGATGATCTCGGTGCTGATCCTGCAGTGCCGTC
GCCCCGTTGCCGCGCGCATCCGCGCGATCGCGCACGACCGCCCGACGCTCGCCGCCGTCTGCAATGCGCTCGCGGACGCG
TGGGCGCCCGTCGCCGTATTCGTCGTGATGGCGCTGTGGTTCGTGTGGGCGCTCGACGTCCATAACGGCTACCGCGTGCT
GATCGCGCTCGGCGGCCGCTCGATCGCGGTGCTGATCGGCATGCGCATGGTGTCGATCGTCGTGTTCGGCGCGCTCGCGC
GGCTGTTCCACGAACGCGACGACGACCGCACGCTCGTCCATCTGCATGCGTACCGCTACTACCCGCTGCTGCGCCGCATC
GTCTCGGCCGTGATCGCCGTCGTGACGGTCGTGCTGCTGCTGCAGGTGTGGGGTGTGCCGGTGTTCCGCGCGTTCGAGAG
CGGCACGATCGGCCATCGGCTCGCCTCGGCGCTCGTGACGATCGCGATCGCGGCCGCGGTCGCGCTCGTCGTCTGGGAAG
CGGCGAACATCGCGATCGAGCGGCGGCTGCAGCGCTGGACGCGCGAAGGCAACCTCGTACGCGCCGCGCGGCTGCGCACC
TTGCTGCCGATGCTGCGTACGCTGCTGTTCGTGATGATTGCGCTCGTCGTCGTGCTGACGGGCCTCAGCGAGATCGGCGT
CAACGTCGGGCCGCTGCTCGCCGGCGCGAGCATCTTCGGCGTCGCGCTCGGCTTCGGCTCGCAAAAGCTCGTGCAGGATT
TCATCACCGGCATCTTTCTGCTGATGGAGAACGCGATGCAGGTCGGCGACTGGGTGACGCTCGCCGGCGTGTCGGGCACC
GTCGAATACCTGTCGATCCGCACCGTGCGGCTGCGCGGCGGCGACGGGTCGCTCTACACGATTCCGTTCAGCTCGGTGAC
GACGGTGAACAACACGAACCGCGGGCTCGGCAACGCGGCCGTCAAGGTCAGCATCGCGTACGGCGAGGACATCGACCGCG
CGGTCGCGACGCTGAAGGAAATCGGCGCCGCGCTGCGCGACGATCCGCAGTATCGCGACGGCATTCTGTCGGACTTCAGC
TACTGGGGCGTCGATCAGGTCGACGGCGCGGCGATCGCGTTGGCCGGACAGATGCAGTGCCGCGATTCCGCGCGCTGGGG
CGTGCAGCGCGAATTCAACCGCCGCATCGCGCAGCTGTTCCGCGAACGCGGCATCCGCATTGCCGATCCGCAGCGCAGCC
TCGTCGCGTATGCGGCAGGCTCCCAGCGCGAAGATGAAGGCGATGGCGATGGCGGCGTCGGCGCCGATCGGCAACGCAGC
GATGAAAACGGTGGCGAACACGCCGCGCCCGACGGCGCGACCGGACAGCCGCCCGTCGATTCGTCGACGCCGGCGCCCAA
GCCGGCGCAATAG

Upstream 100 bases:

>100_bases
TCGCACGCCGGAACTATTCGGTTCCGAACGCGATCATGTTAACTTCCGTCCATCGTCCAGCTCGGCGGGCTGCGTGCCGA
TGCGCGCCCGCATGCCACTC

Downstream 100 bases:

>100_bases
CGCGGCCCGCTAGCACGTCGGCCGCGCGTCGGCGCATCGCGCGTTACGTCGCGTCCGGCTTCTTCGCGCGTCGCGCACGC
GTCGATGCACGCGGCGCGTC

Product: MscS family small conductance mechanosensitive ion channel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 830; Mature: 830

Protein sequence:

>830_residues
MRHLLLGWLLAAFVTAVQAATPAPAAASAASSAEPALTPQQARQALAVLESPREREQVETTLRAIAAVGVLSAPAVPASA
AAPASGASSAAAPAALTSNGLASMLVRQGSRWAVDIGNALRDSLRSLLEVGSVGRWWQDTLGRTDARTDLARSLGLIVAV
LVPALVGEWLVRRLLRRALAGLAARRAGAPRDTASDDDARADDAAPPHDTPPPDASDATQSSSRGRGHARRHTTLLHRMP
RAIVSLLLRSVPLLVFVGIAGLMMSFVTDDGTPVEAALGALIDIYVIGRLVTIVSRLFFQPDAHQLRLLHISDAWAAFAQ
RSIARIVIVVGACTAAVEIAANLGLTEAGHVALQKAVALVAHVMISVLILQCRRPVAARIRAIAHDRPTLAAVCNALADA
WAPVAVFVVMALWFVWALDVHNGYRVLIALGGRSIAVLIGMRMVSIVVFGALARLFHERDDDRTLVHLHAYRYYPLLRRI
VSAVIAVVTVVLLLQVWGVPVFRAFESGTIGHRLASALVTIAIAAAVALVVWEAANIAIERRLQRWTREGNLVRAARLRT
LLPMLRTLLFVMIALVVVLTGLSEIGVNVGPLLAGASIFGVALGFGSQKLVQDFITGIFLLMENAMQVGDWVTLAGVSGT
VEYLSIRTVRLRGGDGSLYTIPFSSVTTVNNTNRGLGNAAVKVSIAYGEDIDRAVATLKEIGAALRDDPQYRDGILSDFS
YWGVDQVDGAAIALAGQMQCRDSARWGVQREFNRRIAQLFRERGIRIADPQRSLVAYAAGSQREDEGDGDGGVGADRQRS
DENGGEHAAPDGATGQPPVDSSTPAPKPAQ

Sequences:

>Translated_830_residues
MRHLLLGWLLAAFVTAVQAATPAPAAASAASSAEPALTPQQARQALAVLESPREREQVETTLRAIAAVGVLSAPAVPASA
AAPASGASSAAAPAALTSNGLASMLVRQGSRWAVDIGNALRDSLRSLLEVGSVGRWWQDTLGRTDARTDLARSLGLIVAV
LVPALVGEWLVRRLLRRALAGLAARRAGAPRDTASDDDARADDAAPPHDTPPPDASDATQSSSRGRGHARRHTTLLHRMP
RAIVSLLLRSVPLLVFVGIAGLMMSFVTDDGTPVEAALGALIDIYVIGRLVTIVSRLFFQPDAHQLRLLHISDAWAAFAQ
RSIARIVIVVGACTAAVEIAANLGLTEAGHVALQKAVALVAHVMISVLILQCRRPVAARIRAIAHDRPTLAAVCNALADA
WAPVAVFVVMALWFVWALDVHNGYRVLIALGGRSIAVLIGMRMVSIVVFGALARLFHERDDDRTLVHLHAYRYYPLLRRI
VSAVIAVVTVVLLLQVWGVPVFRAFESGTIGHRLASALVTIAIAAAVALVVWEAANIAIERRLQRWTREGNLVRAARLRT
LLPMLRTLLFVMIALVVVLTGLSEIGVNVGPLLAGASIFGVALGFGSQKLVQDFITGIFLLMENAMQVGDWVTLAGVSGT
VEYLSIRTVRLRGGDGSLYTIPFSSVTTVNNTNRGLGNAAVKVSIAYGEDIDRAVATLKEIGAALRDDPQYRDGILSDFS
YWGVDQVDGAAIALAGQMQCRDSARWGVQREFNRRIAQLFRERGIRIADPQRSLVAYAAGSQREDEGDGDGGVGADRQRS
DENGGEHAAPDGATGQPPVDSSTPAPKPAQ
>Mature_830_residues
MRHLLLGWLLAAFVTAVQAATPAPAAASAASSAEPALTPQQARQALAVLESPREREQVETTLRAIAAVGVLSAPAVPASA
AAPASGASSAAAPAALTSNGLASMLVRQGSRWAVDIGNALRDSLRSLLEVGSVGRWWQDTLGRTDARTDLARSLGLIVAV
LVPALVGEWLVRRLLRRALAGLAARRAGAPRDTASDDDARADDAAPPHDTPPPDASDATQSSSRGRGHARRHTTLLHRMP
RAIVSLLLRSVPLLVFVGIAGLMMSFVTDDGTPVEAALGALIDIYVIGRLVTIVSRLFFQPDAHQLRLLHISDAWAAFAQ
RSIARIVIVVGACTAAVEIAANLGLTEAGHVALQKAVALVAHVMISVLILQCRRPVAARIRAIAHDRPTLAAVCNALADA
WAPVAVFVVMALWFVWALDVHNGYRVLIALGGRSIAVLIGMRMVSIVVFGALARLFHERDDDRTLVHLHAYRYYPLLRRI
VSAVIAVVTVVLLLQVWGVPVFRAFESGTIGHRLASALVTIAIAAAVALVVWEAANIAIERRLQRWTREGNLVRAARLRT
LLPMLRTLLFVMIALVVVLTGLSEIGVNVGPLLAGASIFGVALGFGSQKLVQDFITGIFLLMENAMQVGDWVTLAGVSGT
VEYLSIRTVRLRGGDGSLYTIPFSSVTTVNNTNRGLGNAAVKVSIAYGEDIDRAVATLKEIGAALRDDPQYRDGILSDFS
YWGVDQVDGAAIALAGQMQCRDSARWGVQREFNRRIAQLFRERGIRIADPQRSLVAYAAGSQREDEGDGDGGVGADRQRS
DENGGEHAAPDGATGQPPVDSSTPAPKPAQ

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI87081787, Length=499, Percent_Identity=29.0581162324649, Blast_Score=172, Evalue=7e-44,
Organism=Escherichia coli, GI1786670, Length=211, Percent_Identity=28.436018957346, Blast_Score=71, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 88209; Mature: 88209

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHLLLGWLLAAFVTAVQAATPAPAAASAASSAEPALTPQQARQALAVLESPREREQVET
CHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH
TLRAIAAVGVLSAPAVPASAAAPASGASSAAAPAALTSNGLASMLVRQGSRWAVDIGNAL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHH
RDSLRSLLEVGSVGRWWQDTLGRTDARTDLARSLGLIVAVLVPALVGEWLVRRLLRRALA
HHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLAARRAGAPRDTASDDDARADDAAPPHDTPPPDASDATQSSSRGRGHARRHTTLLHRMP
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RAIVSLLLRSVPLLVFVGIAGLMMSFVTDDGTPVEAALGALIDIYVIGRLVTIVSRLFFQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDAHQLRLLHISDAWAAFAQRSIARIVIVVGACTAAVEIAANLGLTEAGHVALQKAVALV
CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AHVMISVLILQCRRPVAARIRAIAHDRPTLAAVCNALADAWAPVAVFVVMALWFVWALDV
HHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HNGYRVLIALGGRSIAVLIGMRMVSIVVFGALARLFHERDDDRTLVHLHAYRYYPLLRRI
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHH
VSAVIAVVTVVLLLQVWGVPVFRAFESGTIGHRLASALVTIAIAAAVALVVWEAANIAIE
HHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRLQRWTREGNLVRAARLRTLLPMLRTLLFVMIALVVVLTGLSEIGVNVGPLLAGASIFG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHH
VALGFGSQKLVQDFITGIFLLMENAMQVGDWVTLAGVSGTVEYLSIRTVRLRGGDGSLYT
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEEEEEEECCCCCEEE
IPFSSVTTVNNTNRGLGNAAVKVSIAYGEDIDRAVATLKEIGAALRDDPQYRDGILSDFS
ECCCCEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCHH
YWGVDQVDGAAIALAGQMQCRDSARWGVQREFNRRIAQLFRERGIRIADPQRSLVAYAAG
HCCCCCCCCCCEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEECCHHHHHHEECC
SQREDEGDGDGGVGADRQRSDENGGEHAAPDGATGQPPVDSSTPAPKPAQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRHLLLGWLLAAFVTAVQAATPAPAAASAASSAEPALTPQQARQALAVLESPREREQVET
CHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH
TLRAIAAVGVLSAPAVPASAAAPASGASSAAAPAALTSNGLASMLVRQGSRWAVDIGNAL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHH
RDSLRSLLEVGSVGRWWQDTLGRTDARTDLARSLGLIVAVLVPALVGEWLVRRLLRRALA
HHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLAARRAGAPRDTASDDDARADDAAPPHDTPPPDASDATQSSSRGRGHARRHTTLLHRMP
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RAIVSLLLRSVPLLVFVGIAGLMMSFVTDDGTPVEAALGALIDIYVIGRLVTIVSRLFFQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDAHQLRLLHISDAWAAFAQRSIARIVIVVGACTAAVEIAANLGLTEAGHVALQKAVALV
CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AHVMISVLILQCRRPVAARIRAIAHDRPTLAAVCNALADAWAPVAVFVVMALWFVWALDV
HHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HNGYRVLIALGGRSIAVLIGMRMVSIVVFGALARLFHERDDDRTLVHLHAYRYYPLLRRI
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHH
VSAVIAVVTVVLLLQVWGVPVFRAFESGTIGHRLASALVTIAIAAAVALVVWEAANIAIE
HHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRLQRWTREGNLVRAARLRTLLPMLRTLLFVMIALVVVLTGLSEIGVNVGPLLAGASIFG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHH
VALGFGSQKLVQDFITGIFLLMENAMQVGDWVTLAGVSGTVEYLSIRTVRLRGGDGSLYT
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEEEEEEECCCCCEEE
IPFSSVTTVNNTNRGLGNAAVKVSIAYGEDIDRAVATLKEIGAALRDDPQYRDGILSDFS
ECCCCEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCHH
YWGVDQVDGAAIALAGQMQCRDSARWGVQREFNRRIAQLFRERGIRIADPQRSLVAYAAG
HCCCCCCCCCCEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEECCHHHHHHEECC
SQREDEGDGDGGVGADRQRSDENGGEHAAPDGATGQPPVDSSTPAPKPAQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]