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The map label for this gene is 189352524

Identifier: 189352524

GI number: 189352524

Start: 586782

End: 588050

Strand: Reverse

Name: 189352524

Synonym: BMULJ_03752

Alternate gene names: NA

Gene position: 588050-586782 (Counterclockwise)

Preceding gene: 189352525

Following gene: 189352523

Centisome position: 23.78

GC content: 54.85

Gene sequence:

>1269_bases
ATGAAGTCATCAAAATTTCTGACTATTGCCACAATCTTTCTGGTTGTAGCTCTTGACGCCAAAGCACAAAGTACAGTGAC
CCTCTATGGAATTATCGACGAAGCGGTCGTACTGCAAAGCAACAGTCGTATAGCCGCAGGCAATGCACCGACGGGCGGGT
ACGGGACCGGTAAAAGCAAGGTTTTCCTAGACGCGACCTCAGGGCTGAGTGGAAGTCGCTGGGGACTGAAAGGAACCGAG
AACCTCGGCGGCGGACTCTCCGTGATATTCCAACTGGAAAACGGACTTAACCTCAATAACGGCGCACTGGGCCAGGGAGG
GCTGGAATTTGGTCGCCAGGCCTATGTCGGGTTAAACGATGAGCGACTTGGCAAAATCACGCTCGGCAGGCAATACGATA
GCGTCGTCGATTTTATCGGCCCACTGACACTTGCAACACGCATCGGCTCATCATACGCAGCTCCGCCTGGTGATCTTTAC
AATACCAGCAATGCGCAGCGAGTCAACAACGCGATTAAATATACTAGCCCGAGGTTGAATGGGCTTCTGTTCGACGCGCT
ATACAGCTTCGGCGGCGTGTCTGGATCGATGGCGCGCAACCAGATCTATTCCGTCGGTTCGGATTTCCTGAGCGGTCCTA
TCAGATTGTCGGCTGCCTTTCTGAAGGTGAACCAACCGAACGTATCCTTTTTCAGCAATAGCGCAATTGCTGCGAACACG
CTGGGCACGTCAACTACTAGTATTTCGACCCCGGTGTATAGCGGTTACGCTAACGCAAACTCGTATCAGGTGGCAGCTGC
TGGTGGTCAATTCAGCACCGGCCCCGTGACCTTATCCGCCGCGTACTTGAACGCGCAATTCAGGGGGCTTGGGTCCAGTC
TGTCAAATGCCGGAAACGGCGTGCCTGCCGGCAAGGCATCTGGCAATGCGATCTTCAACACACTGGAACTGAATGTCATA
AGTTTTATAACACCCGCCCTCCAGATCGGCGCCGCCTATTCGTTCACTCGGGCCAGCAGCGTCGCCGGCTTACGGGACGC
GACAGCCAGAACCTCCGCGGGTTCAGGTGGCGCGAATTATAATCAGTTCGCTATCTCTTCGGACTACGCGCTATCGAAAC
GCACCGACGCCTACGCAATGGCATCGTTGCAACTGGCAAGCGGTACCGACTCTACTGGCGGAAAGGCCGTTGCGGCAATC
GACACACTGACTCCCTCGGCGAACAATCGCCAGGCGGTGCTCCGAGTTGGCTTGAGGCATAAGTTCTAA

Upstream 100 bases:

>100_bases
GGAGCAAGTCTGATTCTCGGTCGTCGGAAACCGGGCTAGCCGGAAAAATTTTGTTCGTCACAATCCAATGCATTATTATT
TATAAGCACTACGATATAAT

Downstream 100 bases:

>100_bases
CCCGTGAATTTTACTCACGCGGTTCTTCCCCAACATCAGGAATTTAACAATGATAGACGGACGGTTAAATCAGGAATTCA
AGCAACGCGAAGCAGGTACG

Product: outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MKSSKFLTIATIFLVVALDAKAQSTVTLYGIIDEAVVLQSNSRIAAGNAPTGGYGTGKSKVFLDATSGLSGSRWGLKGTE
NLGGGLSVIFQLENGLNLNNGALGQGGLEFGRQAYVGLNDERLGKITLGRQYDSVVDFIGPLTLATRIGSSYAAPPGDLY
NTSNAQRVNNAIKYTSPRLNGLLFDALYSFGGVSGSMARNQIYSVGSDFLSGPIRLSAAFLKVNQPNVSFFSNSAIAANT
LGTSTTSISTPVYSGYANANSYQVAAAGGQFSTGPVTLSAAYLNAQFRGLGSSLSNAGNGVPAGKASGNAIFNTLELNVI
SFITPALQIGAAYSFTRASSVAGLRDATARTSAGSGGANYNQFAISSDYALSKRTDAYAMASLQLASGTDSTGGKAVAAI
DTLTPSANNRQAVLRVGLRHKF

Sequences:

>Translated_422_residues
MKSSKFLTIATIFLVVALDAKAQSTVTLYGIIDEAVVLQSNSRIAAGNAPTGGYGTGKSKVFLDATSGLSGSRWGLKGTE
NLGGGLSVIFQLENGLNLNNGALGQGGLEFGRQAYVGLNDERLGKITLGRQYDSVVDFIGPLTLATRIGSSYAAPPGDLY
NTSNAQRVNNAIKYTSPRLNGLLFDALYSFGGVSGSMARNQIYSVGSDFLSGPIRLSAAFLKVNQPNVSFFSNSAIAANT
LGTSTTSISTPVYSGYANANSYQVAAAGGQFSTGPVTLSAAYLNAQFRGLGSSLSNAGNGVPAGKASGNAIFNTLELNVI
SFITPALQIGAAYSFTRASSVAGLRDATARTSAGSGGANYNQFAISSDYALSKRTDAYAMASLQLASGTDSTGGKAVAAI
DTLTPSANNRQAVLRVGLRHKF
>Mature_422_residues
MKSSKFLTIATIFLVVALDAKAQSTVTLYGIIDEAVVLQSNSRIAAGNAPTGGYGTGKSKVFLDATSGLSGSRWGLKGTE
NLGGGLSVIFQLENGLNLNNGALGQGGLEFGRQAYVGLNDERLGKITLGRQYDSVVDFIGPLTLATRIGSSYAAPPGDLY
NTSNAQRVNNAIKYTSPRLNGLLFDALYSFGGVSGSMARNQIYSVGSDFLSGPIRLSAAFLKVNQPNVSFFSNSAIAANT
LGTSTTSISTPVYSGYANANSYQVAAAGGQFSTGPVTLSAAYLNAQFRGLGSSLSNAGNGVPAGKASGNAIFNTLELNVI
SFITPALQIGAAYSFTRASSVAGLRDATARTSAGSGGANYNQFAISSDYALSKRTDAYAMASLQLASGTDSTGGKAVAAI
DTLTPSANNRQAVLRVGLRHKF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 43435; Mature: 43435

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSKFLTIATIFLVVALDAKAQSTVTLYGIIDEAVVLQSNSRIAAGNAPTGGYGTGKSK
CCCCCCHHHHHHHHHHEECCCCCCEEEEEEEECCEEEEECCCEEEECCCCCCCCCCCCCE
VFLDATSGLSGSRWGLKGTENLGGGLSVIFQLENGLNLNNGALGQGGLEFGRQAYVGLND
EEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHCCEEEECCCC
ERLGKITLGRQYDSVVDFIGPLTLATRIGSSYAAPPGDLYNTSNAQRVNNAIKYTSPRLN
CCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHEECCCCHH
GLLFDALYSFGGVSGSMARNQIYSVGSDFLSGPIRLSAAFLKVNQPNVSFFSNSAIAANT
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCEEECCCCEEECC
LGTSTTSISTPVYSGYANANSYQVAAAGGQFSTGPVTLSAAYLNAQFRGLGSSLSNAGNG
CCCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCEEEEEEEECHHHHHCCHHHHCCCCC
VPAGKASGNAIFNTLELNVISFITPALQIGAAYSFTRASSVAGLRDATARTSAGSGGANY
CCCCCCCCCEEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCC
NQFAISSDYALSKRTDAYAMASLQLASGTDSTGGKAVAAIDTLTPSANNRQAVLRVGLRH
CEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCC
KF
CC
>Mature Secondary Structure
MKSSKFLTIATIFLVVALDAKAQSTVTLYGIIDEAVVLQSNSRIAAGNAPTGGYGTGKSK
CCCCCCHHHHHHHHHHEECCCCCCEEEEEEEECCEEEEECCCEEEECCCCCCCCCCCCCE
VFLDATSGLSGSRWGLKGTENLGGGLSVIFQLENGLNLNNGALGQGGLEFGRQAYVGLND
EEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHCCEEEECCCC
ERLGKITLGRQYDSVVDFIGPLTLATRIGSSYAAPPGDLYNTSNAQRVNNAIKYTSPRLN
CCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHEECCCCHH
GLLFDALYSFGGVSGSMARNQIYSVGSDFLSGPIRLSAAFLKVNQPNVSFFSNSAIAANT
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCEEECCCCEEECC
LGTSTTSISTPVYSGYANANSYQVAAAGGQFSTGPVTLSAAYLNAQFRGLGSSLSNAGNG
CCCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCEEEEEEEECHHHHHCCHHHHCCCCC
VPAGKASGNAIFNTLELNVISFITPALQIGAAYSFTRASSVAGLRDATARTSAGSGGANY
CCCCCCCCCEEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCC
NQFAISSDYALSKRTDAYAMASLQLASGTDSTGGKAVAAIDTLTPSANNRQAVLRVGLRH
CEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCC
KF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]