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The map label for this gene is yagA [C]

Identifier: 189352518

GI number: 189352518

Start: 578223

End: 578858

Strand: Direct

Name: yagA [C]

Synonym: BMULJ_03742

Alternate gene names: 189352518

Gene position: 578223-578858 (Clockwise)

Preceding gene: 189352517

Following gene: 189352519

Centisome position: 23.38

GC content: 59.28

Gene sequence:

>636_bases
GTGGTGCTGACCGAGGCGCAGCTCGTCGCGCTCGAACGAGCCAAGCACGAGAAGGAAGTGCACGGCGAATTCGAGTCCGA
ATGTCCGGGCTACTGCGGCGCGCAGGATACGTTCTATGTCGGCAGCCTCAAGGGCGTCGGCCGTGTCTACCAGCAGACTT
TCGTCGATACCTACTCGAAGGTTGCGTTCGCCAAGCTCTACGATCGCAAGACGCCCTTGCCGGCGGCGGACCTGCTCAAC
GATCGCGTTGTCCCGTTCTTCGATGGCTTCGGCATTCCGTTGCTACGCGTGCTGACAGACCGCGGCACCGAATACTGCGG
CAACCCCGAGCATCACGAATACGAGCTGTATCTGGCCTTGGAGGACATCGACCACACCCGGACAAAGGCCAAGTCGCCGC
AAACCAACGGGATCGTCGAACGGCTGCACAAGACCATGCTCAACGAGTTCTATCGCATCGTCTTCCGCAAGAAGATCTAC
GACTCGATCGCCACCTTGCAGACGGACCTTGATGCGTGGCTCGACCAGTACAACAATGAACGAGAGCATCAGGGGCGCTG
GTGTTACGGCAAGACGCCGATGCGCACTTTCCTCGATTCGCTCGATCTCGCCAAGGAGAAACTCATCCCCCATTGA

Upstream 100 bases:

>100_bases
CCGTCTCGCCCCAAGGCGTCCGTAGCATCTGGTTGCGCCACGATCTCGAGACCATGCCGAAGCGCCTGAAGGCCTTGGAA
GCCAAGTCCGCCCAGGAGGG

Downstream 100 bases:

>100_bases
TGACTCGTTCTTTGTCGGCCCGACTACCTGTCAGATCAAGTCCCGGCTAATACACGTGCAGGCGTTCCACCGCCATGAGC
TCGTCGCGACCCATCCGCGC

Product: ISBmu27 transposase

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; ISDvu4 Transposase; Transposase ISSod; Transposase And Inactivated Derivatives; Transposase Fragment; ISSod13 Transposase; Integrase; Transposase For Tn; Integrase Catalytic Domain-Containing Protein; Integrase Family Protein

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MVLTEAQLVALERAKHEKEVHGEFESECPGYCGAQDTFYVGSLKGVGRVYQQTFVDTYSKVAFAKLYDRKTPLPAADLLN
DRVVPFFDGFGIPLLRVLTDRGTEYCGNPEHHEYELYLALEDIDHTRTKAKSPQTNGIVERLHKTMLNEFYRIVFRKKIY
DSIATLQTDLDAWLDQYNNEREHQGRWCYGKTPMRTFLDSLDLAKEKLIPH

Sequences:

>Translated_211_residues
MVLTEAQLVALERAKHEKEVHGEFESECPGYCGAQDTFYVGSLKGVGRVYQQTFVDTYSKVAFAKLYDRKTPLPAADLLN
DRVVPFFDGFGIPLLRVLTDRGTEYCGNPEHHEYELYLALEDIDHTRTKAKSPQTNGIVERLHKTMLNEFYRIVFRKKIY
DSIATLQTDLDAWLDQYNNEREHQGRWCYGKTPMRTFLDSLDLAKEKLIPH
>Mature_211_residues
MVLTEAQLVALERAKHEKEVHGEFESECPGYCGAQDTFYVGSLKGVGRVYQQTFVDTYSKVAFAKLYDRKTPLPAADLLN
DRVVPFFDGFGIPLLRVLTDRGTEYCGNPEHHEYELYLALEDIDHTRTKAKSPQTNGIVERLHKTMLNEFYRIVFRKKIY
DSIATLQTDLDAWLDQYNNEREHQGRWCYGKTPMRTFLDSLDLAKEKLIPH

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24442; Mature: 24442

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLTEAQLVALERAKHEKEVHGEFESECPGYCGAQDTFYVGSLKGVGRVYQQTFVDTYSK
CCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHH
VAFAKLYDRKTPLPAADLLNDRVVPFFDGFGIPLLRVLTDRGTEYCGNPEHHEYELYLAL
HHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEE
EDIDHTRTKAKSPQTNGIVERLHKTMLNEFYRIVFRKKIYDSIATLQTDLDAWLDQYNNE
EHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
REHQGRWCYGKTPMRTFLDSLDLAKEKLIPH
HHHCCCEEECCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVLTEAQLVALERAKHEKEVHGEFESECPGYCGAQDTFYVGSLKGVGRVYQQTFVDTYSK
CCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHH
VAFAKLYDRKTPLPAADLLNDRVVPFFDGFGIPLLRVLTDRGTEYCGNPEHHEYELYLAL
HHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEE
EDIDHTRTKAKSPQTNGIVERLHKTMLNEFYRIVFRKKIYDSIATLQTDLDAWLDQYNNE
EHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
REHQGRWCYGKTPMRTFLDSLDLAKEKLIPH
HHHCCCEEECCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA