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The map label for this gene is yggA [C]

Identifier: 189352005

GI number: 189352005

Start: 25390

End: 26010

Strand: Reverse

Name: yggA [C]

Synonym: BMULJ_03222

Alternate gene names: 189352005

Gene position: 26010-25390 (Counterclockwise)

Preceding gene: 189352007

Following gene: 189352004

Centisome position: 1.05

GC content: 67.95

Gene sequence:

>621_bases
ATGAACTGGCTCGCTTTCTCCCATGGCGCCGCGCTGTGCGCGTCGCTGATCGTCACCATCGGCGCGCAAAACGCGTTCGT
GCTCCGGCAAGGGATCATGCGTTCGCATGTCGGCAAGATCGTGCTGCTGTGCGCGCTGTCCGACATGATCCTGATCGCCG
CGGGCGTCGGCGGCGCGTCGGCGCTCGTCGAACGCTACCCGACGTTCGTCCACGCGGTGCTGTACGTCGGCCTCGCGTAT
CTGGCGTGGTTCGGGTTCAATGCGCTGCGCCGCGCGTTCAAGCCCGGGCACGAAACGCTCGACGTGCGCGGCGACGCGGT
CGCGCCGCCGCCGCAAAGCGCGCTCGCGATCGTGTTGATGACGCTCGCGTTCACGTGGCTCAACCCGCACGTGTATCTCG
ACACGTTCCTGCTGATCGGCACGGCCGGCGCACGCGAGCCGGAAGGCGCGCGGCTCGCGTTCGCGATCGGCGCGATGTCG
GTCAGCATCGTCTGGTTCATCGGGCTCGGATACGGCGCACGACTGCTCGCGCCGTGGTTCCGCAAGGCCGTCGCGTGGCG
CGTGCTCGACGGTGCGATCGGCAGCATGGTGCTGTTTCTCGCAGCCGTGCAGTTGCGGTAA

Upstream 100 bases:

>100_bases
TTAGCGTTCCTTAATCGACATTAGCTGATTTAGCTTCTCTTATTCAAGCGATGCCCGCAGACTAGCGCTACCCGATCCAT
CCGTCTACTGCTCATCCACC

Downstream 100 bases:

>100_bases
GGCACACGCGTTCGCGCCGCGATCGCACCTCGACCGCACCTCGATCGCGGCGGCCGCCGGTCGCCGCCGGCGTGCCGCTC
GCCGAACGTCGCGCTATCCG

Product: putative LysE family lysine efflux permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MNWLAFSHGAALCASLIVTIGAQNAFVLRQGIMRSHVGKIVLLCALSDMILIAAGVGGASALVERYPTFVHAVLYVGLAY
LAWFGFNALRRAFKPGHETLDVRGDAVAPPPQSALAIVLMTLAFTWLNPHVYLDTFLLIGTAGAREPEGARLAFAIGAMS
VSIVWFIGLGYGARLLAPWFRKAVAWRVLDGAIGSMVLFLAAVQLR

Sequences:

>Translated_206_residues
MNWLAFSHGAALCASLIVTIGAQNAFVLRQGIMRSHVGKIVLLCALSDMILIAAGVGGASALVERYPTFVHAVLYVGLAY
LAWFGFNALRRAFKPGHETLDVRGDAVAPPPQSALAIVLMTLAFTWLNPHVYLDTFLLIGTAGAREPEGARLAFAIGAMS
VSIVWFIGLGYGARLLAPWFRKAVAWRVLDGAIGSMVLFLAAVQLR
>Mature_206_residues
MNWLAFSHGAALCASLIVTIGAQNAFVLRQGIMRSHVGKIVLLCALSDMILIAAGVGGASALVERYPTFVHAVLYVGLAY
LAWFGFNALRRAFKPGHETLDVRGDAVAPPPQSALAIVLMTLAFTWLNPHVYLDTFLLIGTAGAREPEGARLAFAIGAMS
VSIVWFIGLGYGARLLAPWFRKAVAWRVLDGAIGSMVLFLAAVQLR

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=196, Percent_Identity=40.3061224489796, Blast_Score=131, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22065; Mature: 22065

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWLAFSHGAALCASLIVTIGAQNAFVLRQGIMRSHVGKIVLLCALSDMILIAAGVGGAS
CCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
ALVERYPTFVHAVLYVGLAYLAWFGFNALRRAFKPGHETLDVRGDAVAPPPQSALAIVLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHH
TLAFTWLNPHVYLDTFLLIGTAGAREPEGARLAFAIGAMSVSIVWFIGLGYGARLLAPWF
HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHH
RKAVAWRVLDGAIGSMVLFLAAVQLR
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNWLAFSHGAALCASLIVTIGAQNAFVLRQGIMRSHVGKIVLLCALSDMILIAAGVGGAS
CCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
ALVERYPTFVHAVLYVGLAYLAWFGFNALRRAFKPGHETLDVRGDAVAPPPQSALAIVLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHH
TLAFTWLNPHVYLDTFLLIGTAGAREPEGARLAFAIGAMSVSIVWFIGLGYGARLLAPWF
HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHH
RKAVAWRVLDGAIGSMVLFLAAVQLR
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]