Click here to switch to the map view.

The map label for this gene is yqjI [H]

Identifier: 189351997

GI number: 189351997

Start: 17559

End: 18311

Strand: Reverse

Name: yqjI [H]

Synonym: BMULJ_03214

Alternate gene names: 189351997

Gene position: 18311-17559 (Counterclockwise)

Preceding gene: 189351999

Following gene: 189351996

Centisome position: 0.74

GC content: 70.52

Gene sequence:

>753_bases
ATGCGACACCATTCCTTCAACGGCCATGCGCGATGCGCCGGCCGCGACGCGCATATCCGTCACGACTGGCTCGCGGGCCT
TTGGCATGCGATCGGCCGCCATCGTCGCGGCCACGATCCGTTCGGCGGCGGCCCCTTCGGCGGCCCGGGCGGCCCGGGCG
GCCCGGGCGGCCGTGGCGGGCGCGGCGGCTTCGGCGACTTCGGTGACGACGGCATGCCGCGCGGCCGCCAGTTCACGTCC
GACGATCTGCAGCTTCTGCTGCTCGCCTTGCTCGCCGAGCAGCCGAGCCACGGCTACGAGCTGATCAAGGCGCTCGACAC
GCGCTCGAGCGGCTTCTACAGCCCGAGTCCCGGCATGGTCTATCCGGCGCTCACGTATCTCGAAGAAGTCGGCTACGTCG
CGTCGCAAGCCGAAGGCAATCGCAAGCGCTACGCGCTGACCGACGCCGGCCGCACCCATCTCGATGCGCAACGCGAGCGC
GTCGACACGCTGTTCGCTCGCCTCACGCATCTCGCGCGAAAGATGGAATTCATGCGCCGCGCCTTCGCCGGCGAAGCGTC
GGGCGCCGGAGCGTCGGGCGCCGCAGCGCAGGACGAAGCACAGGCCGGCTGGCTGCCCGAGTTTGTCGACGCACGCGTCG
CGCTGAAGCATGCGCTGCTGCACAAGAGCGCCGCATCGCCCGACGAGCAGCGGCGCATCGCGGCCATTCTGCGCCGCGCG
ATCGCCGAAATCGAAGGCCGGTCCGACGTGTAA

Upstream 100 bases:

>100_bases
GCTCCGTCCGAGCGCCCCATCCCTCCCCGATTAATCTCCTTGACGCCCTATCTTTCGATATATATCTTTAGATATGTTTT
CCGATATATAGGACACGATC

Downstream 100 bases:

>100_bases
CGCGCGCCGCCCCTCACATTTCCTGGAGAACGGATTGAACACCACCCTTGCCGATCGCACCGTGACGCGCGTGCGTCACA
CACTGAAATTCCGCCTGCTG

Product: PadR-like family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MRHHSFNGHARCAGRDAHIRHDWLAGLWHAIGRHRRGHDPFGGGPFGGPGGPGGPGGRGGRGGFGDFGDDGMPRGRQFTS
DDLQLLLLALLAEQPSHGYELIKALDTRSSGFYSPSPGMVYPALTYLEEVGYVASQAEGNRKRYALTDAGRTHLDAQRER
VDTLFARLTHLARKMEFMRRAFAGEASGAGASGAAAQDEAQAGWLPEFVDARVALKHALLHKSAASPDEQRRIAAILRRA
IAEIEGRSDV

Sequences:

>Translated_250_residues
MRHHSFNGHARCAGRDAHIRHDWLAGLWHAIGRHRRGHDPFGGGPFGGPGGPGGPGGRGGRGGFGDFGDDGMPRGRQFTS
DDLQLLLLALLAEQPSHGYELIKALDTRSSGFYSPSPGMVYPALTYLEEVGYVASQAEGNRKRYALTDAGRTHLDAQRER
VDTLFARLTHLARKMEFMRRAFAGEASGAGASGAAAQDEAQAGWLPEFVDARVALKHALLHKSAASPDEQRRIAAILRRA
IAEIEGRSDV
>Mature_250_residues
MRHHSFNGHARCAGRDAHIRHDWLAGLWHAIGRHRRGHDPFGGGPFGGPGGPGGPGGRGGRGGFGDFGDDGMPRGRQFTS
DDLQLLLLALLAEQPSHGYELIKALDTRSSGFYSPSPGMVYPALTYLEEVGYVASQAEGNRKRYALTDAGRTHLDAQRER
VDTLFARLTHLARKMEFMRRAFAGEASGAGASGAAAQDEAQAGWLPEFVDARVALKHALLHKSAASPDEQRRIAAILRRA
IAEIEGRSDV

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789452, Length=88, Percent_Identity=40.9090909090909, Blast_Score=81, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 26984; Mature: 26984

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHHSFNGHARCAGRDAHIRHDWLAGLWHAIGRHRRGHDPFGGGPFGGPGGPGGPGGRGG
CCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
RGGFGDFGDDGMPRGRQFTSDDLQLLLLALLAEQPSHGYELIKALDTRSSGFYSPSPGMV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCH
YPALTYLEEVGYVASQAEGNRKRYALTDAGRTHLDAQRERVDTLFARLTHLARKMEFMRR
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAGEASGAGASGAAAQDEAQAGWLPEFVDARVALKHALLHKSAASPDEQRRIAAILRRA
HHCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IAEIEGRSDV
HHHHCCCCCC
>Mature Secondary Structure
MRHHSFNGHARCAGRDAHIRHDWLAGLWHAIGRHRRGHDPFGGGPFGGPGGPGGPGGRGG
CCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
RGGFGDFGDDGMPRGRQFTSDDLQLLLLALLAEQPSHGYELIKALDTRSSGFYSPSPGMV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCH
YPALTYLEEVGYVASQAEGNRKRYALTDAGRTHLDAQRERVDTLFARLTHLARKMEFMRR
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAGEASGAGASGAAAQDEAQAGWLPEFVDARVALKHALLHKSAASPDEQRRIAAILRRA
HHCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IAEIEGRSDV
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]