| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184748
Identifier: 189184748
GI number: 189184748
Start: 1875085
End: 1875672
Strand: Direct
Name: 189184748
Synonym: OTT_1841
Alternate gene names: NA
Gene position: 1875085-1875672 (Clockwise)
Preceding gene: 189184744
Following gene: 189184750
Centisome position: 93.33
GC content: 28.06
Gene sequence:
>588_bases ATGAAAAAATGTATTACAACAGTATACTATTTAATAGATAATTTTTGCAAGATATATCAAGAGTATGAAAGAAATAGATT AATACCAAGTAGTAATCAAAGGAACAGAGATGGAAAGTTATCCTTAGCTGAGTTATTAACAATAGTGATATATTTTTATT TATCTCCATGCAAGGATTTTAAAAATTATTATCTATATTACTTGCATTATAAGTATAAAGGATACTTTTGTTTACCAAGT TATAGTAGAATAATACAACTATGGCATATAATATTGCTACCGCTAGCTGCATTAATGCATTATCTGAAAGGAGAAGAGAC TGATATATATTACATCGATTCTACAAAGTTAGCAATTTGTCATAATAAACGTACTTCCAGCAATAGAGTTTTTAACAGAA TTTCTAAAATTGGTAAGAGTAGTTATGGCTGGTTCTTAGGCTTTAAGCTACATCTTGTAATTAATAATAAAGGCGAAATA ATGTCAGTTAAATCTACTAAAGGCAATAAAAGCGATCTATCTATAGCTTCAGTTATTTCTCAAGGCTTATCTGGTAAATT GTTTGCTGACAAAGCCTTACATATCTAA
Upstream 100 bases:
>100_bases TTAGGATAAGGAAAAGTATGAGAAGCAGTGAATAAAAGGTATACAAAGAAAGGATGTTGAGTTATAAAGAAAATTTAAAT AAAAACAAAACAACCCCAAC
Downstream 100 bases:
>100_bases AGCATTATTTCATCAACTGTTCTCCAATGGTCTACGTTTATTTACTAATCTTCGTAAAGATATGAAAACATATTTATTAG ACATAGAAGATAAGAAGTTA
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase And Inactivated Derivative; IS4 Family Transposase; Transposase IS4 Family; Protease; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MKKCITTVYYLIDNFCKIYQEYERNRLIPSSNQRNRDGKLSLAELLTIVIYFYLSPCKDFKNYYLYYLHYKYKGYFCLPS YSRIIQLWHIILLPLAALMHYLKGEETDIYYIDSTKLAICHNKRTSSNRVFNRISKIGKSSYGWFLGFKLHLVINNKGEI MSVKSTKGNKSDLSIASVISQGLSGKLFADKALHI
Sequences:
>Translated_195_residues MKKCITTVYYLIDNFCKIYQEYERNRLIPSSNQRNRDGKLSLAELLTIVIYFYLSPCKDFKNYYLYYLHYKYKGYFCLPS YSRIIQLWHIILLPLAALMHYLKGEETDIYYIDSTKLAICHNKRTSSNRVFNRISKIGKSSYGWFLGFKLHLVINNKGEI MSVKSTKGNKSDLSIASVISQGLSGKLFADKALHI >Mature_195_residues MKKCITTVYYLIDNFCKIYQEYERNRLIPSSNQRNRDGKLSLAELLTIVIYFYLSPCKDFKNYYLYYLHYKYKGYFCLPS YSRIIQLWHIILLPLAALMHYLKGEETDIYYIDSTKLAICHNKRTSSNRVFNRISKIGKSSYGWFLGFKLHLVINNKGEI MSVKSTKGNKSDLSIASVISQGLSGKLFADKALHI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22791; Mature: 22791
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKCITTVYYLIDNFCKIYQEYERNRLIPSSNQRNRDGKLSLAELLTIVIYFYLSPCKDF CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH KNYYLYYLHYKYKGYFCLPSYSRIIQLWHIILLPLAALMHYLKGEETDIYYIDSTKLAIC CCEEEEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEE HNKRTSSNRVFNRISKIGKSSYGWFLGFKLHLVINNKGEIMSVKSTKGNKSDLSIASVIS ECCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHH QGLSGKLFADKALHI CCCCCCEECCCCCCC >Mature Secondary Structure MKKCITTVYYLIDNFCKIYQEYERNRLIPSSNQRNRDGKLSLAELLTIVIYFYLSPCKDF CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH KNYYLYYLHYKYKGYFCLPSYSRIIQLWHIILLPLAALMHYLKGEETDIYYIDSTKLAIC CCEEEEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEE HNKRTSSNRVFNRISKIGKSSYGWFLGFKLHLVINNKGEIMSVKSTKGNKSDLSIASVIS ECCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHH QGLSGKLFADKALHI CCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA