| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184697
Identifier: 189184697
GI number: 189184697
Start: 1815042
End: 1815794
Strand: Direct
Name: 189184697
Synonym: OTT_1790
Alternate gene names: NA
Gene position: 1815042-1815794 (Clockwise)
Preceding gene: 189184696
Following gene: 189184717
Centisome position: 90.35
GC content: 35.99
Gene sequence:
>753_bases ATGCCACGTACAGTTTTAGATTCATCAGAAGATAAAGAAGAACAATTAGTTGCTAAAATAGTAGAATTAGAACAAGCATT AAAAGATTTAGAGAAACCACTCGATAAGTATATCAAGAAGCATGGACTTACTGAGCAATCAAAGAATCTTTTAGATGGGC TAACGAGCTCACAAGAAGAACTAGAAAAGCTGAAATCAAATCAAGACCCTACTAATACCGACTCTATTTGGAAATCATTC ATAAAAGCACTTACTAAGTTTATATCAACAATCAAGGAATTGGTAACAGGGGAACCAGATCAAAGTATACCCAACTCTAT AGATAAAATTAGTAGTTTTATTGAAGAAGCTGAAAAGACTGTGCAAGAGGACCCTAGTATACTACAAAGCGTATGTAATA AATTAAAAAAGCTTTATAGTAGTACAATAAGTAGCGATACTCCTGAAAAAGGTATTGGTGCAACAAATCCATCACCAGAA GAAGCAGCACATACTTCACTCAAAGGTGGAGCTGTAGGATTTGCAGCACTTGCTGAACAATTAGCTCAGAAGTATGGGCA CGGCAGCACAAGAGATGAGGAGGATAGCAGCAAGAGCAAGCATAATAAAAAATCTTTACTAGGATCTTCTGAAGCTTTAG CAAGCTCTTCAGCATCTTTTTTAGAAACTGCAAAACAGCTAAGCAGCAATCTTAATCCTTCCGCTACTCCAAAAACAACT CCAAAAGGTAAAAAAGGTGGATATAGTAAGTAA
Upstream 100 bases:
>100_bases AACTTCACATCTCACATTCTCAAAATATTTTCATTTGCTATTTTCAATATAACAATTATAATTAATGTAGTTTTTATCAA TTTATAGTAGTATTACTAAT
Downstream 100 bases:
>100_bases CTATTAATGTATTGCGTTTGCGTTTTATTTAAAAAATTGAAAATTGAGAAAGAGAGAAAAAAACACAAAACCAACTTTGT CCTGTAGAGTTTTACTAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MPRTVLDSSEDKEEQLVAKIVELEQALKDLEKPLDKYIKKHGLTEQSKNLLDGLTSSQEELEKLKSNQDPTNTDSIWKSF IKALTKFISTIKELVTGEPDQSIPNSIDKISSFIEEAEKTVQEDPSILQSVCNKLKKLYSSTISSDTPEKGIGATNPSPE EAAHTSLKGGAVGFAALAEQLAQKYGHGSTRDEEDSSKSKHNKKSLLGSSEALASSSASFLETAKQLSSNLNPSATPKTT PKGKKGGYSK
Sequences:
>Translated_250_residues MPRTVLDSSEDKEEQLVAKIVELEQALKDLEKPLDKYIKKHGLTEQSKNLLDGLTSSQEELEKLKSNQDPTNTDSIWKSF IKALTKFISTIKELVTGEPDQSIPNSIDKISSFIEEAEKTVQEDPSILQSVCNKLKKLYSSTISSDTPEKGIGATNPSPE EAAHTSLKGGAVGFAALAEQLAQKYGHGSTRDEEDSSKSKHNKKSLLGSSEALASSSASFLETAKQLSSNLNPSATPKTT PKGKKGGYSK >Mature_249_residues PRTVLDSSEDKEEQLVAKIVELEQALKDLEKPLDKYIKKHGLTEQSKNLLDGLTSSQEELEKLKSNQDPTNTDSIWKSFI KALTKFISTIKELVTGEPDQSIPNSIDKISSFIEEAEKTVQEDPSILQSVCNKLKKLYSSTISSDTPEKGIGATNPSPEE AAHTSLKGGAVGFAALAEQLAQKYGHGSTRDEEDSSKSKHNKKSLLGSSEALASSSASFLETAKQLSSNLNPSATPKTTP KGKKGGYSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27055; Mature: 26924
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRTVLDSSEDKEEQLVAKIVELEQALKDLEKPLDKYIKKHGLTEQSKNLLDGLTSSQEE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHH LEKLKSNQDPTNTDSIWKSFIKALTKFISTIKELVTGEPDQSIPNSIDKISSFIEEAEKT HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH VQEDPSILQSVCNKLKKLYSSTISSDTPEKGIGATNPSPEEAAHTSLKGGAVGFAALAEQ HHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH LAQKYGHGSTRDEEDSSKSKHNKKSLLGSSEALASSSASFLETAKQLSSNLNPSATPKTT HHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PKGKKGGYSK CCCCCCCCCC >Mature Secondary Structure PRTVLDSSEDKEEQLVAKIVELEQALKDLEKPLDKYIKKHGLTEQSKNLLDGLTSSQEE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHH LEKLKSNQDPTNTDSIWKSFIKALTKFISTIKELVTGEPDQSIPNSIDKISSFIEEAEKT HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH VQEDPSILQSVCNKLKKLYSSTISSDTPEKGIGATNPSPEEAAHTSLKGGAVGFAALAEQ HHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH LAQKYGHGSTRDEEDSSKSKHNKKSLLGSSEALASSSASFLETAKQLSSNLNPSATPKTT HHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PKGKKGGYSK CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA