| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184662
Identifier: 189184662
GI number: 189184662
Start: 1779745
End: 1780077
Strand: Direct
Name: 189184662
Synonym: OTT_1755
Alternate gene names: NA
Gene position: 1779745-1780077 (Clockwise)
Preceding gene: 189184661
Following gene: 189184663
Centisome position: 88.59
GC content: 34.23
Gene sequence:
>333_bases ATGTTCATATATCAAAAATCTCGACTAAATATGCTAAAACCTACATTTGGAATACAGTGGAATAATGTAGTTGTAGGGCT GTTAATTATAATTACTGCTTGTGTTTTTTCTTTTGAGCCAGCATTAGCTGATACTCTTGAAGGGCAGCTTAATAAAATAG ACGGACTTTTTAGTGGAAAACTAAAAACAATAGGTATATCAAGCGCAACTATTTTATCATCGATTTGGGCTGTAGCAAGA GGTAATATAAAGCTTGCCGGAGTCATGGTAGCAATTGGTGTTATTTTAGGCTTTTACCTAGATTGGATTGCCAGTGGTAT GAAAATAACTTAG
Upstream 100 bases:
>100_bases AGAAAGCGACATCGAAACTTGCTTCAAAGTAAAATTTCATTGAACGTGGAATTCACTAGCATTAGGAGAATAATGCAAAA TTTACTAATAAGCAATAACA
Downstream 100 bases:
>100_bases CGTAAATTAATTTATTGATAAGTTAGAAACATCATTCAAAAAGCGGAGGAATAGTGGAACAGGACAATTCAGACAATGAA AATACAAAAGAAGAAGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MFIYQKSRLNMLKPTFGIQWNNVVVGLLIIITACVFSFEPALADTLEGQLNKIDGLFSGKLKTIGISSATILSSIWAVAR GNIKLAGVMVAIGVILGFYLDWIASGMKIT
Sequences:
>Translated_110_residues MFIYQKSRLNMLKPTFGIQWNNVVVGLLIIITACVFSFEPALADTLEGQLNKIDGLFSGKLKTIGISSATILSSIWAVAR GNIKLAGVMVAIGVILGFYLDWIASGMKIT >Mature_110_residues MFIYQKSRLNMLKPTFGIQWNNVVVGLLIIITACVFSFEPALADTLEGQLNKIDGLFSGKLKTIGISSATILSSIWAVAR GNIKLAGVMVAIGVILGFYLDWIASGMKIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11908; Mature: 11908
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIYQKSRLNMLKPTFGIQWNNVVVGLLIIITACVFSFEPALADTLEGQLNKIDGLFSGK CCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHCCC LKTIGISSATILSSIWAVARGNIKLAGVMVAIGVILGFYLDWIASGMKIT EEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MFIYQKSRLNMLKPTFGIQWNNVVVGLLIIITACVFSFEPALADTLEGQLNKIDGLFSGK CCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHCCC LKTIGISSATILSSIWAVARGNIKLAGVMVAIGVILGFYLDWIASGMKIT EEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA