Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184661

Identifier: 189184661

GI number: 189184661

Start: 1779124

End: 1779600

Strand: Direct

Name: 189184661

Synonym: OTT_1754

Alternate gene names: NA

Gene position: 1779124-1779600 (Clockwise)

Preceding gene: 189184660

Following gene: 189184662

Centisome position: 88.56

GC content: 30.19

Gene sequence:

>477_bases
ATGAGTATTAGAGTTTTGAGATTTATGATAGGGTTTATTGCTTTACTCAAGTTTAGTGATGTATATGCGGTAGAATATGA
GTTAGAAGCTGACAATTTACTAAAGCTTGAGATTTCTGATAGTGGGCCAACAAGAATTAATCTTAAAGATGAAAAAATCA
ATGATATTTTTATGTACCCTCAAAATGCAGCTGAAGTTGTAGTTCATGAGTCTGGATGTTTATTTATTGCTCCACGAGAA
GAAGAAAACAAGCTTTATTTAACAGTAATAGGAGAACACAAAACAATTCAAGATTTAATGTTAATTTTAACTCCAAAAAC
TCCAAGCCCTGTAATGCTTGTTAATGCTGCTACAAAAATAGAGGAAAAGGATAATTCAAAACAAAATAATGCCAATTTGT
TCAGTAATGACGTTAATACAAAAGAATTAACAGCGAAACCTTCAAAAAAACAAAGTAGAAATCCTAAGGAAAAATAA

Upstream 100 bases:

>100_bases
GTAAACATATAGCTGTCGATAAGACTTACCTTTTGACTTACAAGCGAACTCCTAATTACCTTTTATTGTTGACTGGTGTT
AAAGAGAATGGAATAAAAAA

Downstream 100 bases:

>100_bases
AACTGGCTTAAAATGCTAGTTTTTACTTCAAAGACTTAAAGTTCAGAAAGCGACATCGAAACTTGCTTCAAAGTAAAATT
TCATTGAACGTGGAATTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSIRVLRFMIGFIALLKFSDVYAVEYELEADNLLKLEISDSGPTRINLKDEKINDIFMYPQNAAEVVVHESGCLFIAPRE
EENKLYLTVIGEHKTIQDLMLILTPKTPSPVMLVNAATKIEEKDNSKQNNANLFSNDVNTKELTAKPSKKQSRNPKEK

Sequences:

>Translated_158_residues
MSIRVLRFMIGFIALLKFSDVYAVEYELEADNLLKLEISDSGPTRINLKDEKINDIFMYPQNAAEVVVHESGCLFIAPRE
EENKLYLTVIGEHKTIQDLMLILTPKTPSPVMLVNAATKIEEKDNSKQNNANLFSNDVNTKELTAKPSKKQSRNPKEK
>Mature_157_residues
SIRVLRFMIGFIALLKFSDVYAVEYELEADNLLKLEISDSGPTRINLKDEKINDIFMYPQNAAEVVVHESGCLFIAPREE
ENKLYLTVIGEHKTIQDLMLILTPKTPSPVMLVNAATKIEEKDNSKQNNANLFSNDVNTKELTAKPSKKQSRNPKEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17941; Mature: 17810

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRVLRFMIGFIALLKFSDVYAVEYELEADNLLKLEISDSGPTRINLKDEKINDIFMYP
CCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEECC
QNAAEVVVHESGCLFIAPREEENKLYLTVIGEHKTIQDLMLILTPKTPSPVMLVNAATKI
CCCEEEEEECCCEEEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCEEEEECCHHC
EEKDNSKQNNANLFSNDVNTKELTAKPSKKQSRNPKEK
CCCCCCCCCCCCEEECCCCCCEEECCCCCHHCCCCCCC
>Mature Secondary Structure 
SIRVLRFMIGFIALLKFSDVYAVEYELEADNLLKLEISDSGPTRINLKDEKINDIFMYP
CHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEECC
QNAAEVVVHESGCLFIAPREEENKLYLTVIGEHKTIQDLMLILTPKTPSPVMLVNAATKI
CCCEEEEEECCCEEEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCEEEEECCHHC
EEKDNSKQNNANLFSNDVNTKELTAKPSKKQSRNPKEK
CCCCCCCCCCCCEEECCCCCCEEECCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA