| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184652
Identifier: 189184652
GI number: 189184652
Start: 1769269
End: 1769937
Strand: Direct
Name: 189184652
Synonym: OTT_1745
Alternate gene names: NA
Gene position: 1769269-1769937 (Clockwise)
Preceding gene: 189184648
Following gene: 189184653
Centisome position: 88.07
GC content: 27.35
Gene sequence:
>669_bases ATGAAACCGTGGTTATATGATTTTAATGGATGGAATGTCAAATTATTCTTAATCATCAATCAAATTACCAATAGTAATGA ATGTATCGCTAAAATGTTCTACTATTTATCTAGAATATTCTATGCTAAAAATTTTACAATATATTATTTATTACTAGCAG TTTATTTATTAATCAAACTTAGAAATTATCATGGTGAAAAACGCGCTTATCAATTTAACATAACTTGTAATTATTTGTTA TATGTAGGAACAGCATATACTATATTTTTACTAGTATACAGCAAATTGAAACGTTTCTTCTCATTTACTAGGCCTTGTTG CTCACTTTCATCATCGGAAATACAAACAGTTATAGATTTTAATACAGAATATGTTAATTGTTTTACTAGTTTCCCTAGTG CTCATACTGGAATCACATTTTTCATCGTGGCATGTTTATGGCATAAACTAAACAGAATAGGTAAATTCGCAGGAGTGGCC CTAGTCATAATGGTTGGTATATCAAGATTGTCATTGGCAATGCATTATCCATCTGACATTATATATTCTTGTATAATTAC AGCAATGATTTTATATACTACTAAGGCTATATTAGAAATTCAAATAATAAAATCATTTACTCAAGCTATTCAAAATAAAA TATATATGCTAGCTTGCAAAATAAAGTGA
Upstream 100 bases:
>100_bases TTGACAAAGTTACCTTAAAAATTATATTGATTAGTACTTATTTAACATATAATATACCAACCAATAATTTATATAAACTC AAATACAATAAGGAAAAATA
Downstream 100 bases:
>100_bases TGTTATGAAAGTTATAGCAGCTTTTTTTATTACGGATTATAAATAATCATCCTTAATTTATGCTGCTGTGTTTGCCATTG ACTTCAGTAGCATAAATATA
Product: putative membrane-associated phospholipid phosphatase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MKPWLYDFNGWNVKLFLIINQITNSNECIAKMFYYLSRIFYAKNFTIYYLLLAVYLLIKLRNYHGEKRAYQFNITCNYLL YVGTAYTIFLLVYSKLKRFFSFTRPCCSLSSSEIQTVIDFNTEYVNCFTSFPSAHTGITFFIVACLWHKLNRIGKFAGVA LVIMVGISRLSLAMHYPSDIIYSCIITAMILYTTKAILEIQIIKSFTQAIQNKIYMLACKIK
Sequences:
>Translated_222_residues MKPWLYDFNGWNVKLFLIINQITNSNECIAKMFYYLSRIFYAKNFTIYYLLLAVYLLIKLRNYHGEKRAYQFNITCNYLL YVGTAYTIFLLVYSKLKRFFSFTRPCCSLSSSEIQTVIDFNTEYVNCFTSFPSAHTGITFFIVACLWHKLNRIGKFAGVA LVIMVGISRLSLAMHYPSDIIYSCIITAMILYTTKAILEIQIIKSFTQAIQNKIYMLACKIK >Mature_222_residues MKPWLYDFNGWNVKLFLIINQITNSNECIAKMFYYLSRIFYAKNFTIYYLLLAVYLLIKLRNYHGEKRAYQFNITCNYLL YVGTAYTIFLLVYSKLKRFFSFTRPCCSLSSSEIQTVIDFNTEYVNCFTSFPSAHTGITFFIVACLWHKLNRIGKFAGVA LVIMVGISRLSLAMHYPSDIIYSCIITAMILYTTKAILEIQIIKSFTQAIQNKIYMLACKIK
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25917; Mature: 25917
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPWLYDFNGWNVKLFLIINQITNSNECIAKMFYYLSRIFYAKNFTIYYLLLAVYLLIKL CCCEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH RNYHGEKRAYQFNITCNYLLYVGTAYTIFLLVYSKLKRFFSFTRPCCSLSSSEIQTVIDF HHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHEEC NTEYVNCFTSFPSAHTGITFFIVACLWHKLNRIGKFAGVALVIMVGISRLSLAMHYPSDI CCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH IYSCIITAMILYTTKAILEIQIIKSFTQAIQNKIYMLACKIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC >Mature Secondary Structure MKPWLYDFNGWNVKLFLIINQITNSNECIAKMFYYLSRIFYAKNFTIYYLLLAVYLLIKL CCCEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH RNYHGEKRAYQFNITCNYLLYVGTAYTIFLLVYSKLKRFFSFTRPCCSLSSSEIQTVIDF HHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHEEC NTEYVNCFTSFPSAHTGITFFIVACLWHKLNRIGKFAGVALVIMVGISRLSLAMHYPSDI CCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH IYSCIITAMILYTTKAILEIQIIKSFTQAIQNKIYMLACKIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA