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The map label for this gene is sca2

Identifier: 189184648

GI number: 189184648

Start: 1762740

End: 1765223

Strand: Direct

Name: sca2

Synonym: OTT_1741

Alternate gene names: NA

Gene position: 1762740-1765223 (Clockwise)

Preceding gene: 189184635

Following gene: 189184652

Centisome position: 87.74

GC content: 31.36

Gene sequence:

>2484_bases
ATGAAAAACAACAAAAAAATAGCCATAGTAATTATTTCTACATTATTCTTTACCTATACGATTCAAAGTATGGCAAATGA
ACCAAATACTAAAAGCAGCACTGCCAATTTTAAAGCACAATTAAGTGAGCGACTACGAATGCATCAACAATCACATAATG
AATCTGATGATGAGGATGATATGGAGTCAGATATAAAATCTCAACAACAATTTGCAGGCTTCAAAAAACATCAAAACAGT
AATAATAAATATGTATCAAAAATTTTTGCACCTGAAACTTTAATCACTAAAGTACCTAGAATACCTGATAAAGAAAATAA
CACAGCACCAAACCAAAACAACGATGCAACTGATGACTGGGATGACGATAATATCAGCACTAAAGATTTAAAATCTAGTC
ATAAAGCTTTAACTTTTCAGGAAAAGAAAGATATCATCGGGCAAAAATTAGGACCCATATTTGCAGCAAAATCAAAGACT
AACACTAAACAACCGACTGGTAATAATGTCAAGAAACCTGTTGCAGTGATACTAAGCTCTAATACAACTCCTATCGCTAC
TACGCATTCTAACGATAATATCAGCAGTAAAGATTTAACTTTTCAGGAAAAGAAAGATATCATCGGGCAAAAATTAGGAC
CTATATTTGCAGCAAAATCAAAGACTAACACTAAACAACAGACTGGCAATAATTTCAAGAAGCCTGTCACAGCGATACTA
ACAACTCCTATCGCTACTACGCATTCCAACGATAATATCAGCAGTAAAGATTTAACTTTTCAGGAAAAGAAAGATATCAT
TGGGCAAAAATTAGGACCTATATTTGCAGCAAAATCAAAGACTAACACTAAACAACCAACTGGTAATAATGTCAAGAAGC
CTGTAACAGCTATACTAAACCCTAATACAACTCTTATCGCTACTACGCATTCTAACGATAATATCAGCAGTAAAGATTTA
ACTTTTCAGGAAAAGAAAGATATCATCGGGCAAAAATTAGGACCTATATTTGCAGCAAAATCAAAGACTAACACTAAACA
ACAGACTGATAGTAACGTCAAGAAGCATGTCACGGCGATACCAAAGCCTAATATAACTCCTATCACTACTCCTACTCACC
AGACATTGATATGTTCAGGTCAATCCAATGCTGAAGCAGAAGATATATATTATGATGCTGAGGATAATCAATCCAATGCT
GCAACAGAAGATATATATTATGACGCTGAAGACAATCAATCCAATGCTGCAACAGAAGATATATATTATGATGCTGAAGA
CAATCAATCCAACTCTGCAACAGAAGATATATATTATGATGCTGAAGATGTTCTAGATTGCTCAGCAAATCAACCTTCAT
TACTGCCACCTAGTACTCTAAATAATTCTGCTGTTCAACCACTAAATAATAATAACCAACAATTAGATAATTCTGAACAA
AATAAAACTATAGAATCGGAAATAAAAGTAAAAGCATATTTTAAAGAACAAGAGAAAGTACTGTTAAAGGCTGCACAAAC
CAATGATATAGCAACAACTAGCGCTATTATTGCTGTTACTGCTACTACGATAAGTGCTATAACATCAAGCATATCTAAAA
TGTGTCAAAATCATCGAAATATTATAAGTTCTGGCTCAAATATCAATAATAATACTAGTTGGAGTATTCAAGGAAAAATT
TTTTCTACTGCTATCAATCCAAATGAGTATACAGAAAACAATAAATATAACTTAAAGAGCACTGGTATATTTGTTACATC
AAATAAATATTTAACTGAAAAGATTATTATTGGTATTACAGGACTATATGCAAATTCTGCTATTAATTATGATCAAAGTG
TATTAACGGCTACAGACTGTACAACATACTCATTATCTTTAAATGGAAGATATTACTTACAACGGAATATATTTATACAA
GGAATAACAGGCTTTATCAACTATGATGGAAAAAATAAGTACACTACTCAGTCTTCTAGCAAAATTAGTGGCGAAAGTTA
CTATGGCGATTTTATGTTAGGATGTGATTTACATCATACTAATTCACAATTGATTTTGTCACCAATAGTTGGTATCAGAT
ATAATAGGATTTATAACTCAAGTTATAAGTTGTTTGATGATATTACTATAGGCAGTATGAATCACAATACATTAGTTGGC
AGCGTAGGATTTTCAACAAAATATACTATTAATAATATTAGTAAAAACATTTCAGTAAGACCTGAATTTCAAGCATTGAT
TCATACTAATTTATACACTAATAGTAGTAATAATATCATGCTAGAGTATGCTAATTCTATTAATTATAGTGATGTGGATA
ATGCTAAACCTATTAGTATAGATACTAAGCCGATCTGTCAGTTAGGTGCTGCAATTACTCTACTATTAACTAACAAAATA
GAATTAGGAGGATCGTATAACATTTATTTTGCTGAAAAGTATATTGTTAAAGTAAGCACTATAAGTATGAAAGCTAATTT
TTAG

Upstream 100 bases:

>100_bases
TATTCATTTAATATGTTGTAAAATATTTGACTTGTAAATTAAATTATATTAATACTTATTTATATTATTTTCACATTTAA
TGAATAAATGGCCGCATATT

Downstream 100 bases:

>100_bases
CTTTTATACTTTAGCAAGTATATGATCCAGAGTTCGATATTAATCTATGTTCTACCGACTTTACATCATTCTACTCATAT
CGAGTTCTTGATTATCTAAA

Product: putative cell surface antigen

Products: NA

Alternate protein names: Cell Surface Antigen; Outer Membrane Protein

Number of amino acids: Translated: 827; Mature: 827

Protein sequence:

>827_residues
MKNNKKIAIVIISTLFFTYTIQSMANEPNTKSSTANFKAQLSERLRMHQQSHNESDDEDDMESDIKSQQQFAGFKKHQNS
NNKYVSKIFAPETLITKVPRIPDKENNTAPNQNNDATDDWDDDNISTKDLKSSHKALTFQEKKDIIGQKLGPIFAAKSKT
NTKQPTGNNVKKPVAVILSSNTTPIATTHSNDNISSKDLTFQEKKDIIGQKLGPIFAAKSKTNTKQQTGNNFKKPVTAIL
TTPIATTHSNDNISSKDLTFQEKKDIIGQKLGPIFAAKSKTNTKQPTGNNVKKPVTAILNPNTTLIATTHSNDNISSKDL
TFQEKKDIIGQKLGPIFAAKSKTNTKQQTDSNVKKHVTAIPKPNITPITTPTHQTLICSGQSNAEAEDIYYDAEDNQSNA
ATEDIYYDAEDNQSNAATEDIYYDAEDNQSNSATEDIYYDAEDVLDCSANQPSLLPPSTLNNSAVQPLNNNNQQLDNSEQ
NKTIESEIKVKAYFKEQEKVLLKAAQTNDIATTSAIIAVTATTISAITSSISKMCQNHRNIISSGSNINNNTSWSIQGKI
FSTAINPNEYTENNKYNLKSTGIFVTSNKYLTEKIIIGITGLYANSAINYDQSVLTATDCTTYSLSLNGRYYLQRNIFIQ
GITGFINYDGKNKYTTQSSSKISGESYYGDFMLGCDLHHTNSQLILSPIVGIRYNRIYNSSYKLFDDITIGSMNHNTLVG
SVGFSTKYTINNISKNISVRPEFQALIHTNLYTNSSNNIMLEYANSINYSDVDNAKPISIDTKPICQLGAAITLLLTNKI
ELGGSYNIYFAEKYIVKVSTISMKANF

Sequences:

>Translated_827_residues
MKNNKKIAIVIISTLFFTYTIQSMANEPNTKSSTANFKAQLSERLRMHQQSHNESDDEDDMESDIKSQQQFAGFKKHQNS
NNKYVSKIFAPETLITKVPRIPDKENNTAPNQNNDATDDWDDDNISTKDLKSSHKALTFQEKKDIIGQKLGPIFAAKSKT
NTKQPTGNNVKKPVAVILSSNTTPIATTHSNDNISSKDLTFQEKKDIIGQKLGPIFAAKSKTNTKQQTGNNFKKPVTAIL
TTPIATTHSNDNISSKDLTFQEKKDIIGQKLGPIFAAKSKTNTKQPTGNNVKKPVTAILNPNTTLIATTHSNDNISSKDL
TFQEKKDIIGQKLGPIFAAKSKTNTKQQTDSNVKKHVTAIPKPNITPITTPTHQTLICSGQSNAEAEDIYYDAEDNQSNA
ATEDIYYDAEDNQSNAATEDIYYDAEDNQSNSATEDIYYDAEDVLDCSANQPSLLPPSTLNNSAVQPLNNNNQQLDNSEQ
NKTIESEIKVKAYFKEQEKVLLKAAQTNDIATTSAIIAVTATTISAITSSISKMCQNHRNIISSGSNINNNTSWSIQGKI
FSTAINPNEYTENNKYNLKSTGIFVTSNKYLTEKIIIGITGLYANSAINYDQSVLTATDCTTYSLSLNGRYYLQRNIFIQ
GITGFINYDGKNKYTTQSSSKISGESYYGDFMLGCDLHHTNSQLILSPIVGIRYNRIYNSSYKLFDDITIGSMNHNTLVG
SVGFSTKYTINNISKNISVRPEFQALIHTNLYTNSSNNIMLEYANSINYSDVDNAKPISIDTKPICQLGAAITLLLTNKI
ELGGSYNIYFAEKYIVKVSTISMKANF
>Mature_827_residues
MKNNKKIAIVIISTLFFTYTIQSMANEPNTKSSTANFKAQLSERLRMHQQSHNESDDEDDMESDIKSQQQFAGFKKHQNS
NNKYVSKIFAPETLITKVPRIPDKENNTAPNQNNDATDDWDDDNISTKDLKSSHKALTFQEKKDIIGQKLGPIFAAKSKT
NTKQPTGNNVKKPVAVILSSNTTPIATTHSNDNISSKDLTFQEKKDIIGQKLGPIFAAKSKTNTKQQTGNNFKKPVTAIL
TTPIATTHSNDNISSKDLTFQEKKDIIGQKLGPIFAAKSKTNTKQPTGNNVKKPVTAILNPNTTLIATTHSNDNISSKDL
TFQEKKDIIGQKLGPIFAAKSKTNTKQQTDSNVKKHVTAIPKPNITPITTPTHQTLICSGQSNAEAEDIYYDAEDNQSNA
ATEDIYYDAEDNQSNAATEDIYYDAEDNQSNSATEDIYYDAEDVLDCSANQPSLLPPSTLNNSAVQPLNNNNQQLDNSEQ
NKTIESEIKVKAYFKEQEKVLLKAAQTNDIATTSAIIAVTATTISAITSSISKMCQNHRNIISSGSNINNNTSWSIQGKI
FSTAINPNEYTENNKYNLKSTGIFVTSNKYLTEKIIIGITGLYANSAINYDQSVLTATDCTTYSLSLNGRYYLQRNIFIQ
GITGFINYDGKNKYTTQSSSKISGESYYGDFMLGCDLHHTNSQLILSPIVGIRYNRIYNSSYKLFDDITIGSMNHNTLVG
SVGFSTKYTINNISKNISVRPEFQALIHTNLYTNSSNNIMLEYANSINYSDVDNAKPISIDTKPICQLGAAITLLLTNKI
ELGGSYNIYFAEKYIVKVSTISMKANF

Specific function: Unknown

COG id: COG3468

COG function: function code MU; Type V secretory pathway, adhesin AidA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91501; Mature: 91501

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNKKIAIVIISTLFFTYTIQSMANEPNTKSSTANFKAQLSERLRMHQQSHNESDDEDD
CCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHH
MESDIKSQQQFAGFKKHQNSNNKYVSKIFAPETLITKVPRIPDKENNTAPNQNNDATDDW
HHHHHHHHHHHHHHHHHCCCCCCEEEEHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
DDDNISTKDLKSSHKALTFQEKKDIIGQKLGPIFAAKSKTNTKQPTGNNVKKPVAVILSS
CCCCCCHHHHHCCCCEEEEHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEEC
NTTPIATTHSNDNISSKDLTFQEKKDIIGQKLGPIFAAKSKTNTKQQTGNNFKKPVTAIL
CCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHCCCCHHCCEEEEE
TTPIATTHSNDNISSKDLTFQEKKDIIGQKLGPIFAAKSKTNTKQPTGNNVKKPVTAILN
ECCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEC
PNTTLIATTHSNDNISSKDLTFQEKKDIIGQKLGPIFAAKSKTNTKQQTDSNVKKHVTAI
CCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHEEEC
PKPNITPITTPTHQTLICSGQSNAEAEDIYYDAEDNQSNAATEDIYYDAEDNQSNAATED
CCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCC
IYYDAEDNQSNSATEDIYYDAEDVLDCSANQPSLLPPSTLNNSAVQPLNNNNQQLDNSEQ
EEECCCCCCCCCCCCCEEECHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
NKTIESEIKVKAYFKEQEKVLLKAAQTNDIATTSAIIAVTATTISAITSSISKMCQNHRN
CCEEHHHEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH
IISSGSNINNNTSWSIQGKIFSTAINPNEYTENNKYNLKSTGIFVTSNKYLTEKIIIGIT
HHHCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEEECCEEEECCCEEEEEEEEEEE
GLYANSAINYDQSVLTATDCTTYSLSLNGRYYLQRNIFIQGITGFINYDGKNKYTTQSSS
EHHCCCCCCCCCCEEEEECCEEEEEEECCEEEEEEEEEEEEEEEEEEECCCCCEECCCCC
KISGESYYGDFMLGCDLHHTNSQLILSPIVGIRYNRIYNSSYKLFDDITIGSMNHNTLVG
CCCCCCCCCCEEEEEEEECCCCCEEEECHHCEEEEEEECCCCEEEEEEEECCCCCCEEEE
SVGFSTKYTINNISKNISVRPEFQALIHTNLYTNSSNNIMLEYANSINYSDVDNAKPISI
ECCCCEEEEEECCCCCCCCCCHHHEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEE
DTKPICQLGAAITLLLTNKIELGGSYNIYFAEKYIVKVSTISMKANF
CCHHHHHHHHEEEEEEECEEECCCCEEEEEEEEEEEEEEEEEEEECC
>Mature Secondary Structure
MKNNKKIAIVIISTLFFTYTIQSMANEPNTKSSTANFKAQLSERLRMHQQSHNESDDEDD
CCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHH
MESDIKSQQQFAGFKKHQNSNNKYVSKIFAPETLITKVPRIPDKENNTAPNQNNDATDDW
HHHHHHHHHHHHHHHHHCCCCCCEEEEHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
DDDNISTKDLKSSHKALTFQEKKDIIGQKLGPIFAAKSKTNTKQPTGNNVKKPVAVILSS
CCCCCCHHHHHCCCCEEEEHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEEC
NTTPIATTHSNDNISSKDLTFQEKKDIIGQKLGPIFAAKSKTNTKQQTGNNFKKPVTAIL
CCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHCCCCHHCCEEEEE
TTPIATTHSNDNISSKDLTFQEKKDIIGQKLGPIFAAKSKTNTKQPTGNNVKKPVTAILN
ECCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEC
PNTTLIATTHSNDNISSKDLTFQEKKDIIGQKLGPIFAAKSKTNTKQQTDSNVKKHVTAI
CCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHEEEC
PKPNITPITTPTHQTLICSGQSNAEAEDIYYDAEDNQSNAATEDIYYDAEDNQSNAATED
CCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCC
IYYDAEDNQSNSATEDIYYDAEDVLDCSANQPSLLPPSTLNNSAVQPLNNNNQQLDNSEQ
EEECCCCCCCCCCCCCEEECHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
NKTIESEIKVKAYFKEQEKVLLKAAQTNDIATTSAIIAVTATTISAITSSISKMCQNHRN
CCEEHHHEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH
IISSGSNINNNTSWSIQGKIFSTAINPNEYTENNKYNLKSTGIFVTSNKYLTEKIIIGIT
HHHCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEEECCEEEECCCEEEEEEEEEEE
GLYANSAINYDQSVLTATDCTTYSLSLNGRYYLQRNIFIQGITGFINYDGKNKYTTQSSS
EHHCCCCCCCCCCEEEEECCEEEEEEECCEEEEEEEEEEEEEEEEEEECCCCCEECCCCC
KISGESYYGDFMLGCDLHHTNSQLILSPIVGIRYNRIYNSSYKLFDDITIGSMNHNTLVG
CCCCCCCCCCEEEEEEEECCCCCEEEECHHCEEEEEEECCCCEEEEEEEECCCCCCEEEE
SVGFSTKYTINNISKNISVRPEFQALIHTNLYTNSSNNIMLEYANSINYSDVDNAKPISI
ECCCCEEEEEECCCCCCCCCCHHHEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEE
DTKPICQLGAAITLLLTNKIELGGSYNIYFAEKYIVKVSTISMKANF
CCHHHHHHHHEEEEEEECEEECCCCEEEEEEEEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA