| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184525
Identifier: 189184525
GI number: 189184525
Start: 1646548
End: 1646952
Strand: Direct
Name: 189184525
Synonym: OTT_1618
Alternate gene names: NA
Gene position: 1646548-1646952 (Clockwise)
Preceding gene: 189184524
Following gene: 189184526
Centisome position: 81.96
GC content: 29.88
Gene sequence:
>405_bases ATGATATTAGAAAAAGAATTCAATTCAGAAATAGAAATGAAGATTACTAAATCTGCTCTAAATGCAGTTGCAGAATATAA AGGAATAAAACTTAGGTGCGATTATTTAAGTACAACAAAAGAAGTAATTGGTGACAATTACAGACTACAGGCAGTACTAA CAATACTAATGACTAATGCTATCAGATTTAATAGCAAAGGAAGCAAAGTTGGAGTCAGAATGACGTTATATCCCATGCTA ATGAATAACAAATACAGAAGGTTAGAAGTTATTGTAAATGATACAGGACCAGGATTTTCAAAAAGTAAAGTAGATCAGAT AAATAAAGAATTTAAAGATACATATTCAGAGGAAGCTTCTACACTTGGCTTTAGAATGAAATTTGTAAGGCAATTTATAC AGTAG
Upstream 100 bases:
>100_bases AAGGGAGAAATTACATACGTAAAAAATGAGCATACAGAGGTTATATGCCGTGTACCGATATATGCTCATTATCTTTAATT TTCTAAAATAAGGGTGATTT
Downstream 100 bases:
>100_bases ATGAACGGGGAAATTATGCTGAAAAGCGAAGAAAACAAAGGTGCATGCTTTATATTCAATGTTCCATTGAAACTCGCAAA TACTAGTATAACTAATTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MILEKEFNSEIEMKITKSALNAVAEYKGIKLRCDYLSTTKEVIGDNYRLQAVLTILMTNAIRFNSKGSKVGVRMTLYPML MNNKYRRLEVIVNDTGPGFSKSKVDQINKEFKDTYSEEASTLGFRMKFVRQFIQ
Sequences:
>Translated_134_residues MILEKEFNSEIEMKITKSALNAVAEYKGIKLRCDYLSTTKEVIGDNYRLQAVLTILMTNAIRFNSKGSKVGVRMTLYPML MNNKYRRLEVIVNDTGPGFSKSKVDQINKEFKDTYSEEASTLGFRMKFVRQFIQ >Mature_134_residues MILEKEFNSEIEMKITKSALNAVAEYKGIKLRCDYLSTTKEVIGDNYRLQAVLTILMTNAIRFNSKGSKVGVRMTLYPML MNNKYRRLEVIVNDTGPGFSKSKVDQINKEFKDTYSEEASTLGFRMKFVRQFIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15481; Mature: 15481
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILEKEFNSEIEMKITKSALNAVAEYKGIKLRCDYLSTTKEVIGDNYRLQAVLTILMTNA CCCCCCCCCEEEEEEHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHH IRFNSKGSKVGVRMTLYPMLMNNKYRRLEVIVNDTGPGFSKSKVDQINKEFKDTYSEEAS HEECCCCCEEEEEEEEEHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH TLGFRMKFVRQFIQ HHHHHHHHHHHHHC >Mature Secondary Structure MILEKEFNSEIEMKITKSALNAVAEYKGIKLRCDYLSTTKEVIGDNYRLQAVLTILMTNA CCCCCCCCCEEEEEEHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHH IRFNSKGSKVGVRMTLYPMLMNNKYRRLEVIVNDTGPGFSKSKVDQINKEFKDTYSEEAS HEECCCCCEEEEEEEEEHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH TLGFRMKFVRQFIQ HHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA