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The map label for this gene is dcd [H]

Identifier: 189184502

GI number: 189184502

Start: 1629009

End: 1629575

Strand: Direct

Name: dcd [H]

Synonym: OTT_1595

Alternate gene names: 189184502

Gene position: 1629009-1629575 (Clockwise)

Preceding gene: 189184500

Following gene: 189184503

Centisome position: 81.09

GC content: 33.86

Gene sequence:

>567_bases
ATGTCTATAATGTCAGACAATTGGATCAAAAAAATGGCTGAATCAGAAAATATGATCTCTCCATTTGTTGACAAGCAAGT
TAGAACACACAATAATCAGCATATTCTTTCGTATGGACTATCATCGTACGGTTATGACGCTCGTGTTAGCAACGAGTTTA
AAATTTTCACTAACACAAAACCATCAATTATCGATCCTAAAAAATTTGATCAAGATTGCCTAATTACAAAGATAAGCGAT
ATATGCATCATCCCTCCAAATAGCTTTGCTTTAGGTACAACTATAGAGTATTTTAAAATGCCAAGAGATGTAATAGCAAT
TTGCATAGGAAAGTCAACATATGCACGCTGTGGCATTATTATCAATGTTACTCCTCTTGAACCAGAATGTGAAGGTCATA
TCACATTAGAATTCTCTAATACTACTCCACTACCAGCTAAAATTTATGCCGGTGAAGGAGCATGTCAATTTTTATTTTTA
AAAGGAGATCAACCTTGTAATACTTCGTATCTCGACAGATATGGAAGATATACAAAGCAAATTGGAGTAACACTTCCAAC
AGTATAA

Upstream 100 bases:

>100_bases
AGCAAACTTATGTCTTGTGTATAATTTTTAATTTAAGTATACTGTTCCCTCAAATGTAATTTATTGAGTTTAAACATTTA
AACAAGGTTAATTTTAATTT

Downstream 100 bases:

>100_bases
GTTTAAATAAGTTAATTAATCTATTAAAAAAGATAACTAATATGGTAGCAACATCAAAACCTAAATCAGAACCTAAAATA
GCAGTAAAAGCACAATATGT

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSIMSDNWIKKMAESENMISPFVDKQVRTHNNQHILSYGLSSYGYDARVSNEFKIFTNTKPSIIDPKKFDQDCLITKISD
ICIIPPNSFALGTTIEYFKMPRDVIAICIGKSTYARCGIIINVTPLEPECEGHITLEFSNTTPLPAKIYAGEGACQFLFL
KGDQPCNTSYLDRYGRYTKQIGVTLPTV

Sequences:

>Translated_188_residues
MSIMSDNWIKKMAESENMISPFVDKQVRTHNNQHILSYGLSSYGYDARVSNEFKIFTNTKPSIIDPKKFDQDCLITKISD
ICIIPPNSFALGTTIEYFKMPRDVIAICIGKSTYARCGIIINVTPLEPECEGHITLEFSNTTPLPAKIYAGEGACQFLFL
KGDQPCNTSYLDRYGRYTKQIGVTLPTV
>Mature_187_residues
SIMSDNWIKKMAESENMISPFVDKQVRTHNNQHILSYGLSSYGYDARVSNEFKIFTNTKPSIIDPKKFDQDCLITKISDI
CIIPPNSFALGTTIEYFKMPRDVIAICIGKSTYARCGIIINVTPLEPECEGHITLEFSNTTPLPAKIYAGEGACQFLFLK
GDQPCNTSYLDRYGRYTKQIGVTLPTV

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR008180 [H]

Pfam domain/function: PF00692 dUTPase [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 21139; Mature: 21007

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIMSDNWIKKMAESENMISPFVDKQVRTHNNQHILSYGLSSYGYDARVSNEFKIFTNTK
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCEEEEECCC
PSIIDPKKFDQDCLITKISDICIIPPNSFALGTTIEYFKMPRDVIAICIGKSTYARCGII
CCEECCCCCCCCCEEEEECCEEEECCCCEEECCCHHHHHCCHHHEEEEECCCCCCEEEEE
INVTPLEPECEGHITLEFSNTTPLPAKIYAGEGACQFLFLKGDQPCNTSYLDRYGRYTKQ
EEEECCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHH
IGVTLPTV
HCEECCCC
>Mature Secondary Structure 
SIMSDNWIKKMAESENMISPFVDKQVRTHNNQHILSYGLSSYGYDARVSNEFKIFTNTK
CCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCEEEEECCC
PSIIDPKKFDQDCLITKISDICIIPPNSFALGTTIEYFKMPRDVIAICIGKSTYARCGII
CCEECCCCCCCCCEEEEECCEEEECCCCEEECCCHHHHHCCHHHEEEEECCCCCCEEEEE
INVTPLEPECEGHITLEFSNTTPLPAKIYAGEGACQFLFLKGDQPCNTSYLDRYGRYTKQ
EEEECCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHH
IGVTLPTV
HCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA