Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184437

Identifier: 189184437

GI number: 189184437

Start: 1558960

End: 1559202

Strand: Direct

Name: 189184437

Synonym: OTT_1530

Alternate gene names: NA

Gene position: 1558960-1559202 (Clockwise)

Preceding gene: 189184432

Following gene: 189184438

Centisome position: 77.6

GC content: 35.8

Gene sequence:

>243_bases
ATGAAGTTCGATCAGATTAAAGAGTTAAAGGATGAAAAATTTAGTCGATTAACAGGAGTAAGGAAGGGGACATTTTCAAA
GATAGTGGATATTTTGAGGAAAGCTGACGGTCTTAAGAAATCAAAAGGTGGGCGTAAAAATAAGCTTAATTTGGAGGAAC
AGTTGCTGATGGCCTTAGAATACCTTAGAGAATACCGTACTTATTTCCATATAGGTCAGAACTATGGGATTAGTGAAAGT
TGA

Upstream 100 bases:

>100_bases
GTAATGATTGAAATATTTGAATTGCTAATAAATAATAGACTTCTTTCGAAACTAGAGAATGATGTAGAATAGTGTTATAA
AGATCTGATTTGAGGTAATA

Downstream 100 bases:

>100_bases
GCATATAAAGCTGTAAAATGGGTAGAAGACACCCTAGTTAAACACCTAAACTTTGATCTTACAGGTTGTAAGGCTATAAT
GAAGAGTAATATGAATTATG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MKFDQIKELKDEKFSRLTGVRKGTFSKIVDILRKADGLKKSKGGRKNKLNLEEQLLMALEYLREYRTYFHIGQNYGISES

Sequences:

>Translated_80_residues
MKFDQIKELKDEKFSRLTGVRKGTFSKIVDILRKADGLKKSKGGRKNKLNLEEQLLMALEYLREYRTYFHIGQNYGISES
>Mature_80_residues
MKFDQIKELKDEKFSRLTGVRKGTFSKIVDILRKADGLKKSKGGRKNKLNLEEQLLMALEYLREYRTYFHIGQNYGISES

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 9401; Mature: 9401

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFDQIKELKDEKFSRLTGVRKGTFSKIVDILRKADGLKKSKGGRKNKLNLEEQLLMALE
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
YLREYRTYFHIGQNYGISES
HHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKFDQIKELKDEKFSRLTGVRKGTFSKIVDILRKADGLKKSKGGRKNKLNLEEQLLMALE
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
YLREYRTYFHIGQNYGISES
HHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1662761 [H]