Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184258

Identifier: 189184258

GI number: 189184258

Start: 1378398

End: 1378985

Strand: Reverse

Name: 189184258

Synonym: OTT_1351

Alternate gene names: NA

Gene position: 1378985-1378398 (Counterclockwise)

Preceding gene: 189184259

Following gene: 189184257

Centisome position: 68.64

GC content: 31.29

Gene sequence:

>588_bases
ATGGTTCAAAACAAAAAAAAACCGATAATGCCAATTGCTACTGCAATTTGGTTAATCGATAACACAGCGCTAACATTTAA
GCAAATTGCAGAATTTTGTGGTATGCATGAGTTAGAAATCAAAAACATTGCAAATGGTGAAGTAGCACAAGGAATAAAAC
CAATAAATCCAATTTTAACTAATCAACTAACTCAGAAAGAAATTGATAGATGTAGCAACAATTCAAGTGCTGTACTACAG
CTTCATAAGGATGATACTGATTGCTTATTAGGTAACAAAAAAGTAAAAAGAGTAACTAGATATACACCGATTGCAAGAAG
ACATGATAAACCTGATGCAATATACTGGTTATTAAGGACTTATCCAGATATTCAAGATTATCAAATTATTAAGCTAGTTG
GTACTACTAAAACCACTATTAAAGCAATTCGAGAAAAAACACATTGGAATATGAAAGATATACATGCGCGTGATCCTGTA
TTATTAGGCCTATGTAATCAAATGGAACTGGATACTATTGTAAAAAACCTTTCTTCATCAGATAATAAATCAAAGTTAGA
TACTGCAGTAGTTACTGAAGAAGCATAA

Upstream 100 bases:

>100_bases
GAAAAAATGTATTTTTTTTATAAATTAGAAAAAGTTTGAGCATTAGTAAATATGTTTATAATAGCTCAAGAATGTAAACG
GTTTATAAGTTATATAAATT

Downstream 100 bases:

>100_bases
TTAATAATAAATTTGTTATTCAATTAACAAAAATTATAGCATTTAATATTAATTTGTGGTACTTTGCTTTGCAATAAATT
GGGACGTAGCCAAGCGGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MVQNKKKPIMPIATAIWLIDNTALTFKQIAEFCGMHELEIKNIANGEVAQGIKPINPILTNQLTQKEIDRCSNNSSAVLQ
LHKDDTDCLLGNKKVKRVTRYTPIARRHDKPDAIYWLLRTYPDIQDYQIIKLVGTTKTTIKAIREKTHWNMKDIHARDPV
LLGLCNQMELDTIVKNLSSSDNKSKLDTAVVTEEA

Sequences:

>Translated_195_residues
MVQNKKKPIMPIATAIWLIDNTALTFKQIAEFCGMHELEIKNIANGEVAQGIKPINPILTNQLTQKEIDRCSNNSSAVLQ
LHKDDTDCLLGNKKVKRVTRYTPIARRHDKPDAIYWLLRTYPDIQDYQIIKLVGTTKTTIKAIREKTHWNMKDIHARDPV
LLGLCNQMELDTIVKNLSSSDNKSKLDTAVVTEEA
>Mature_195_residues
MVQNKKKPIMPIATAIWLIDNTALTFKQIAEFCGMHELEIKNIANGEVAQGIKPINPILTNQLTQKEIDRCSNNSSAVLQ
LHKDDTDCLLGNKKVKRVTRYTPIARRHDKPDAIYWLLRTYPDIQDYQIIKLVGTTKTTIKAIREKTHWNMKDIHARDPV
LLGLCNQMELDTIVKNLSSSDNKSKLDTAVVTEEA

Specific function: Unknown

COG id: COG3820

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22164; Mature: 22164

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQNKKKPIMPIATAIWLIDNTALTFKQIAEFCGMHELEIKNIANGEVAQGIKPINPILT
CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEEECCCCCCCHHHCCCCCCCHHHH
NQLTQKEIDRCSNNSSAVLQLHKDDTDCLLGNKKVKRVTRYTPIARRHDKPDAIYWLLRT
HHHHHHHHHHHCCCCCEEEEEECCCCCEECCCHHHHHHHHHCCHHHCCCCCHHEEHHHHH
YPDIQDYQIIKLVGTTKTTIKAIREKTHWNMKDIHARDPVLLGLCNQMELDTIVKNLSSS
CCCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCHHHHHHHHHCCC
DNKSKLDTAVVTEEA
CCCHHHHHHEEECCC
>Mature Secondary Structure
MVQNKKKPIMPIATAIWLIDNTALTFKQIAEFCGMHELEIKNIANGEVAQGIKPINPILT
CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEEECCCCCCCHHHCCCCCCCHHHH
NQLTQKEIDRCSNNSSAVLQLHKDDTDCLLGNKKVKRVTRYTPIARRHDKPDAIYWLLRT
HHHHHHHHHHHCCCCCEEEEEECCCCCEECCCHHHHHHHHHCCHHHCCCCCHHEEHHHHH
YPDIQDYQIIKLVGTTKTTIKAIREKTHWNMKDIHARDPVLLGLCNQMELDTIVKNLSSS
CCCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCHHHHHHHHHCCC
DNKSKLDTAVVTEEA
CCCHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA