| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184258
Identifier: 189184258
GI number: 189184258
Start: 1378398
End: 1378985
Strand: Reverse
Name: 189184258
Synonym: OTT_1351
Alternate gene names: NA
Gene position: 1378985-1378398 (Counterclockwise)
Preceding gene: 189184259
Following gene: 189184257
Centisome position: 68.64
GC content: 31.29
Gene sequence:
>588_bases ATGGTTCAAAACAAAAAAAAACCGATAATGCCAATTGCTACTGCAATTTGGTTAATCGATAACACAGCGCTAACATTTAA GCAAATTGCAGAATTTTGTGGTATGCATGAGTTAGAAATCAAAAACATTGCAAATGGTGAAGTAGCACAAGGAATAAAAC CAATAAATCCAATTTTAACTAATCAACTAACTCAGAAAGAAATTGATAGATGTAGCAACAATTCAAGTGCTGTACTACAG CTTCATAAGGATGATACTGATTGCTTATTAGGTAACAAAAAAGTAAAAAGAGTAACTAGATATACACCGATTGCAAGAAG ACATGATAAACCTGATGCAATATACTGGTTATTAAGGACTTATCCAGATATTCAAGATTATCAAATTATTAAGCTAGTTG GTACTACTAAAACCACTATTAAAGCAATTCGAGAAAAAACACATTGGAATATGAAAGATATACATGCGCGTGATCCTGTA TTATTAGGCCTATGTAATCAAATGGAACTGGATACTATTGTAAAAAACCTTTCTTCATCAGATAATAAATCAAAGTTAGA TACTGCAGTAGTTACTGAAGAAGCATAA
Upstream 100 bases:
>100_bases GAAAAAATGTATTTTTTTTATAAATTAGAAAAAGTTTGAGCATTAGTAAATATGTTTATAATAGCTCAAGAATGTAAACG GTTTATAAGTTATATAAATT
Downstream 100 bases:
>100_bases TTAATAATAAATTTGTTATTCAATTAACAAAAATTATAGCATTTAATATTAATTTGTGGTACTTTGCTTTGCAATAAATT GGGACGTAGCCAAGCGGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MVQNKKKPIMPIATAIWLIDNTALTFKQIAEFCGMHELEIKNIANGEVAQGIKPINPILTNQLTQKEIDRCSNNSSAVLQ LHKDDTDCLLGNKKVKRVTRYTPIARRHDKPDAIYWLLRTYPDIQDYQIIKLVGTTKTTIKAIREKTHWNMKDIHARDPV LLGLCNQMELDTIVKNLSSSDNKSKLDTAVVTEEA
Sequences:
>Translated_195_residues MVQNKKKPIMPIATAIWLIDNTALTFKQIAEFCGMHELEIKNIANGEVAQGIKPINPILTNQLTQKEIDRCSNNSSAVLQ LHKDDTDCLLGNKKVKRVTRYTPIARRHDKPDAIYWLLRTYPDIQDYQIIKLVGTTKTTIKAIREKTHWNMKDIHARDPV LLGLCNQMELDTIVKNLSSSDNKSKLDTAVVTEEA >Mature_195_residues MVQNKKKPIMPIATAIWLIDNTALTFKQIAEFCGMHELEIKNIANGEVAQGIKPINPILTNQLTQKEIDRCSNNSSAVLQ LHKDDTDCLLGNKKVKRVTRYTPIARRHDKPDAIYWLLRTYPDIQDYQIIKLVGTTKTTIKAIREKTHWNMKDIHARDPV LLGLCNQMELDTIVKNLSSSDNKSKLDTAVVTEEA
Specific function: Unknown
COG id: COG3820
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22164; Mature: 22164
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQNKKKPIMPIATAIWLIDNTALTFKQIAEFCGMHELEIKNIANGEVAQGIKPINPILT CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEEECCCCCCCHHHCCCCCCCHHHH NQLTQKEIDRCSNNSSAVLQLHKDDTDCLLGNKKVKRVTRYTPIARRHDKPDAIYWLLRT HHHHHHHHHHHCCCCCEEEEEECCCCCEECCCHHHHHHHHHCCHHHCCCCCHHEEHHHHH YPDIQDYQIIKLVGTTKTTIKAIREKTHWNMKDIHARDPVLLGLCNQMELDTIVKNLSSS CCCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCHHHHHHHHHCCC DNKSKLDTAVVTEEA CCCHHHHHHEEECCC >Mature Secondary Structure MVQNKKKPIMPIATAIWLIDNTALTFKQIAEFCGMHELEIKNIANGEVAQGIKPINPILT CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEEECCCCCCCHHHCCCCCCCHHHH NQLTQKEIDRCSNNSSAVLQLHKDDTDCLLGNKKVKRVTRYTPIARRHDKPDAIYWLLRT HHHHHHHHHHHCCCCCEEEEEECCCCCEECCCHHHHHHHHHCCHHHCCCCCHHEEHHHHH YPDIQDYQIIKLVGTTKTTIKAIREKTHWNMKDIHARDPVLLGLCNQMELDTIVKNLSSS CCCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCHHHHHHHHHCCC DNKSKLDTAVVTEEA CCCHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA