Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184248

Identifier: 189184248

GI number: 189184248

Start: 1366408

End: 1366956

Strand: Direct

Name: 189184248

Synonym: OTT_1341

Alternate gene names: NA

Gene position: 1366408-1366956 (Clockwise)

Preceding gene: 189184246

Following gene: 189184249

Centisome position: 68.01

GC content: 26.96

Gene sequence:

>549_bases
ATGATTGATACAATATTAAAAGGATTAATACTGAATAGTTATCGAAGGTTCTTTATTGTATTAGCTATTGTTCCTGTTGT
GAGTTTGTCTTTTGCTTACTATGTAGAATATATACTTGAAGTAGCTCCTTGTACTTTATGCACTTACCAAAGGTGGCCAT
ATTATATGTTGTTTTTTTTAAGTATATTAGGTATATCATTCTCAAGGTTGAGTAATATTTTACATAAGGTTATAATATTG
AATTTTGTAATATCTGCTCTTATATCAGGTTATCACTATGGAATAGAAAAAGAGATCTTTAGTGAACCTAAAACTTGTAA
AGTTAATACAATAATGTCAGAAAATTTGTCAGTTAAAGAAAGAATTAAATTACTTGAAACTATACCTGTAGTTAAAAGTT
GTAAAGCTGTTCCATTTAAAATAATGAACATGTCTATGGCAGTAATGAACTTTCTATGGAGTATATTATTACTGTTATTT
TGTTGCATAGTTAATTTATATTATTGTAAATATGCCAAGGCCAATATTTGTTCAAGATCGTCATGCTAA

Upstream 100 bases:

>100_bases
AACATTATATAGTAGTTTTTACTTAAAAAATACTGTAAACCTTATTATAATAACTGTAAATTTGAAAAAAATTACTTACA
TAAACTATGATTGAATTGAA

Downstream 100 bases:

>100_bases
AATAGCAGAAATGATTCGAGTAAACTACGCTGGTGAGTATGGAGCATGCAGAATTTATAAAGGACAAATAAATTTTATAA
ATAATAAAACATGTAAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MIDTILKGLILNSYRRFFIVLAIVPVVSLSFAYYVEYILEVAPCTLCTYQRWPYYMLFFLSILGISFSRLSNILHKVIIL
NFVISALISGYHYGIEKEIFSEPKTCKVNTIMSENLSVKERIKLLETIPVVKSCKAVPFKIMNMSMAVMNFLWSILLLLF
CCIVNLYYCKYAKANICSRSSC

Sequences:

>Translated_182_residues
MIDTILKGLILNSYRRFFIVLAIVPVVSLSFAYYVEYILEVAPCTLCTYQRWPYYMLFFLSILGISFSRLSNILHKVIIL
NFVISALISGYHYGIEKEIFSEPKTCKVNTIMSENLSVKERIKLLETIPVVKSCKAVPFKIMNMSMAVMNFLWSILLLLF
CCIVNLYYCKYAKANICSRSSC
>Mature_182_residues
MIDTILKGLILNSYRRFFIVLAIVPVVSLSFAYYVEYILEVAPCTLCTYQRWPYYMLFFLSILGISFSRLSNILHKVIIL
NFVISALISGYHYGIEKEIFSEPKTCKVNTIMSENLSVKERIKLLETIPVVKSCKAVPFKIMNMSMAVMNFLWSILLLLF
CCIVNLYYCKYAKANICSRSSC

Specific function: Unknown

COG id: COG1495

COG function: function code O; Disulfide bond formation protein DsbB

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003752 [H]

Pfam domain/function: PF02600 DsbB [H]

EC number: NA

Molecular weight: Translated: 21000; Mature: 21000

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDTILKGLILNSYRRFFIVLAIVPVVSLSFAYYVEYILEVAPCTLCTYQRWPYYMLFFL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
SILGISFSRLSNILHKVIILNFVISALISGYHYGIEKEIFSEPKTCKVNTIMSENLSVKE
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEHHHHHCCCCHHH
RIKLLETIPVVKSCKAVPFKIMNMSMAVMNFLWSILLLLFCCIVNLYYCKYAKANICSRS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SC
CC
>Mature Secondary Structure
MIDTILKGLILNSYRRFFIVLAIVPVVSLSFAYYVEYILEVAPCTLCTYQRWPYYMLFFL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
SILGISFSRLSNILHKVIILNFVISALISGYHYGIEKEIFSEPKTCKVNTIMSENLSVKE
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEHHHHHCCCCHHH
RIKLLETIPVVKSCKAVPFKIMNMSMAVMNFLWSILLLLFCCIVNLYYCKYAKANICSRS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SC
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]